Chy8G152530 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G152530
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	zinc finger CCCH domain-containing protein 25
Location	chrH08: 14370829 .. 14373398 (-)
RNA-Seq Expression	Chy8G152530
Synteny	Chy8G152530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCCTTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTCGCCGTCTTCGCCCAGTAAGTTCACAGTTCTATCTATTTTCTCCCTCTTCTTTGTTTTGATTCTGCTCTCTTGCAGCTGTCTGTTCGTATGTACTTGATAGATTGTGTAGTTGGATAAGTTTAGATTGAGATGTTGTGCTAGATTTGTGTGTTCGACATTGAAGTGAATTATTTCTCCCTTGGTCGTGGTCTTGTTGTTCCAGTAGCTTCTAAATTGAACTTTGCTGGTAGTGACGAAAATTATGGGGTCCTGTGAAAGTAGAAAAAATTGTTTGTAGGTCGTTGTAAATTGTTTTTAGTCGACAATCCTAGGTATTTAGACATTGGTAACTTAAGAGGTGGATTTGATAAATAGACTAATTGAGCTCATAGTTGTTACTCCAATAGATTTTGTTGTTTCTTGTAGTGCCAGCTTTTCCTATTTTAGAATTCATCTTCATTGTGACCTCGGAGGGGCAATCGTATGAGAAGGGTTGGGATGTTTGGAGAAACCTCTTTAGGTCCTAGGTTTAAGTCTCAGGTGGAAAACTCGGCTCCGATTGGTAATATTTGGTTTTTTGTTTTTAGTTTTTGAAAATTGAGCCTATAGACATCCCTTGCAAATGCATGTTTCTCTCCTTGTTTTTTTGATGTGGTTAAGAATTCAATTCTTTCCCTTATAAAATATGCAAATCATGGAAGAAATTGAGAGTATATAGACTTGGTTTTTGAAAACTAAAAACCGAATGGTTACCGAACAGTGTCTAAGGTACTCAAAACCTTTGTTTTCTCTCTGGAGCTAGCCTTGGTGTGGGGAAGGCCTCTTGGCAACTAGGAGGGTAGGTTCTATGCATTATGCATGCTAGAAGAGCTCTTTGATATCTTGGTTTATGTGTGTGTAATCACGTTTGTTTCAATTAATAAAAGAATCTTTTTCTTCTTCCCTGCATTTTTAAGGTTACATGTTCACTTGTGGGTCATTTGTGTTTTTTGAATATTGAAATATATTTGAACGTACAGGTACGGAGAGATTGTAGATGTGAATCTTATCAGAGACAAGGGTACAGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGGTTGTCTCCTTCTCCTCTCTCTAAACCGTTCATTGTTTGTTGTATGGGACTGAATGCGGATCTCTAAGTAATGTTTTTTTGTCTCTTTCAGATAATTTGAATGGTGCACAGATTCTAGGTCGAATCGTTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGATGAAGAAGAACAAAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGATGCAAATTCTCCCATGATGAGCAGGTATGTGTGAGACCTTCTGTTATATAAATTTTCTCTACAAAGGATAGAAAGAGGTTTTGATCCCTGACAGTTTGTTAATGGGGATAGGGATGGTTTGATGTACAGCAAAGGAAGTTTGTTGTTTTTTGTAGGGGAAATATCTTCGCTTCACGGGATTTTTGTTTAGCTTTTACCTTTAATGTTACTGGCTAGTTATGTCTGCATTGAATAAAAGAAGTTTGAAGACTATTTTTTCTTCTGCATGCTTCGATTAGAGTTTTAGCTTCACTTTAAGAAATTTGATGCATGGAAATTGTTCGTTTTTTAGAGAGCTGCAGACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACAGTAGAAAAAATCACGACAAAGAATTACATGCAAAAGGAAGGAAAACTAGTGATAACTTGGGAAGACATCCAAGGGAGACTAGTGGAAGCCTGAGGCAGGAAAATAGACCGAGAGGTTGGGATGATAGTAAAGAATCAGAGCTCAAGTCGAGAGAGGATCATGTTGGGAAAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATTCTGATCCAAAGTCAGGAGATGATCAATATAAAGGGGAAGAGAAAAGATCTAGAAGGAACCACGATGATAACAGGAAAGACGAGAAAAAATCGAGAAAACATGACGATGGTGATGAGATGAAATTAGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAGCATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGCGACAAAGAGTATCCGTCAAAGCTGAGGGAAGATGATAAAAGAAGGGAAAGAGATATATCGGTAAGACATCGCTCGGAATCATATAGGAGGGAAAATCCAGATGAGAAAAGAGATTATCGTTCCTCTCATGGTGGTAGAGATTCTTCATCACATTCTCATAGAGAAAGAAACGAGGATCGTCGTAGATAA

mRNA sequence

ATGAATCCCTTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTCGCCGTCTTCGCCCAGTACGGAGAGATTGTAGATGTGAATCTTATCAGAGACAAGGGTACAGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGATAATTTGAATGGTGCACAGATTCTAGGTCGAATCGTTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGATGAAGAAGAACAAAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGATGCAAATTCTCCCATGATGAGCAGAGAGCTGCAGACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACAGTAGAAAAAATCACGACAAAGAATTACATGCAAAAGGAAGGAAAACTAGTGATAACTTGGGAAGACATCCAAGGGAGACTAGTGGAAGCCTGAGGCAGGAAAATAGACCGAGAGGTTGGGATGATAGTAAAGAATCAGAGCTCAAGTCGAGAGAGGATCATGTTGGGAAAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATTCTGATCCAAAGTCAGGAGATGATCAATATAAAGGGGAAGAGAAAAGATCTAGAAGGAACCACGATGATAACAGGAAAGACGAGAAAAAATCGAGAAAACATGACGATGGTGATGAGATGAAATTAGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAGCATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGCGACAAAGAGTATCCGTCAAAGCTGAGGGAAGATGATAAAAGAAGGGAAAGAGATATATCGGTAAGACATCGCTCGGAATCATATAGGAGGGAAAATCCAGATGAGAAAAGAGATTATCGTTCCTCTCATGGTGGTAGAGATTCTTCATCACATTCTCATAGAGAAAGAAACGAGGATCGTCGTAGATAA

Coding sequence (CDS)

ATGAATCCCTTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTCGCCGTCTTCGCCCAGTACGGAGAGATTGTAGATGTGAATCTTATCAGAGACAAGGGTACAGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGATAATTTGAATGGTGCACAGATTCTAGGTCGAATCGTTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGATGAAGAAGAACAAAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGATGCAAATTCTCCCATGATGAGCAGAGAGCTGCAGACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACAGTAGAAAAAATCACGACAAAGAATTACATGCAAAAGGAAGGAAAACTAGTGATAACTTGGGAAGACATCCAAGGGAGACTAGTGGAAGCCTGAGGCAGGAAAATAGACCGAGAGGTTGGGATGATAGTAAAGAATCAGAGCTCAAGTCGAGAGAGGATCATGTTGGGAAAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATTCTGATCCAAAGTCAGGAGATGATCAATATAAAGGGGAAGAGAAAAGATCTAGAAGGAACCACGATGATAACAGGAAAGACGAGAAAAAATCGAGAAAACATGACGATGGTGATGAGATGAAATTAGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAGCATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGCGACAAAGAGTATCCGTCAAAGCTGAGGGAAGATGATAAAAGAAGGGAAAGAGATATATCGGTAAGACATCGCTCGGAATCATATAGGAGGGAAAATCCAGATGAGAAAAGAGATTATCGTTCCTCTCATGGTGGTAGAGATTCTTCATCACATTCTCATAGAGAAAGAAACGAGGATCGTCGTAGATAA

Protein sequence

MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEEEDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSESYRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR*

Homology

[Close]

BLAST of Chy8G152530 vs. ExPASy Swiss-Prot
Match: Q10B98 (Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0826400 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.7e-78
Identity = 174/319 (54.55%), Postives = 222/319 (69.59%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VKR Q IN +EA LGI E+ SWHAK+KDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           E+VDVNL+RDKGTGKSKG+AF+AYEDQRST LAVDNLNGA++LGRIVRVDHVSKYKKKEE
Sbjct: 61  EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDK-F 180
           ED+EE QKKREARGVC AFQ+GEC RGA C++SHDEQR A+TGWG+ E++ ++W HD+  
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH 180

Query: 181 DSRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDE 240
           +   +H K   + G +   +  +   +++G   Q +R   + D ++S L+    H  +  
Sbjct: 181 EPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKD-RDSRLR----HSDRGS 240

Query: 241 KRSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRK 300
           K   RY  D + +   GD Q   +  R  +  D+  +  +   KHD+GD+ +   D    
Sbjct: 241 KDHDRYRHDRSPERSRGDRQRNND--RYAQGRDEKSERYRSEVKHDEGDQKRSRRDTDSS 300

Query: 301 EENRYRRNQDNELPQHSRR 319
                R N+D+E  + SRR
Sbjct: 301 GHYERRGNEDSERYRKSRR 312

[Close]

BLAST of Chy8G152530 vs. ExPASy Swiss-Prot
Match: Q9SD61 (Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=At3g47120 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.0e-72
Identity = 185/357 (51.82%), Postives = 232/357 (64.99%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AF+AYEDQRST LAVDNLNGA +LGR ++VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+E  ++ REARGVCRAFQRGECTRG  CKFSHDE+RAA+TGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 181 SRKNHDKELH----AKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELK------- 240
             +   +        +G     +       T+G   +E+R   WD  K +  K       
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKKGGTSFG 240

Query: 241 SREDHVGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDD---------NRKDEKK 300
           +R D     E++S R    G  D   GD  Y   ++R R + +D         + K++K+
Sbjct: 241 NRGDFKPDVEEKSYR----GRGD---GDASYGRPKERERVDREDMGPRSRDAYDMKEQKR 300

Query: 301 SRKHDDGDEMKLEDDRYRKEENRYRRNQDNELPQ-HSRRDYNTREE-DRSSKRHGDK 336
           S ++D+    +  D+     E++  R QD E  +  SRRD N REE DR S R  D+
Sbjct: 301 SGRYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREEKDRDSLRREDR 350

[Close]

BLAST of Chy8G152530 vs. ExPASy Swiss-Prot
Match: Q8R0F5 (RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.5e-36
Identity = 122/339 (35.99%), Postives = 180/339 (53.10%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YK SA++FVGG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR +RVDHVS Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
            +D ++        V R  Q   C  G     S   + + D      EDA     H K  
Sbjct: 121 SEDVDD--------VTRELQEKGC--GVKTPPSSPPEVSED------EDAKLTKKHKKDK 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
             K   K+   +G+  ++      R  +   +++ R      SK SE   + +H  ++ K
Sbjct: 181 KEKKKRKKEKTEGQAQAEQ-PSCSRSATVKEKKDERASRKHSSKTSERAQKSEH--RESK 240

Query: 241 RSRRYDLDGNSD--PKSGDDQYKGEEKRSRRNHD--DNRKDEKKSRKHDDGDEMKLEDDR 300
           +S     DG S    ++ D + K  +++ +  H     R+ E+KSR+ + G        R
Sbjct: 241 KSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGR 300

Query: 301 YR--KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHG 334
           +R   +   +R    +  P  S R    R        HG
Sbjct: 301 HRGHSDGRSHRSRSRSRSPDKSHRHKKYRHSRERDSYHG 320

[Close]

BLAST of Chy8G152530 vs. ExPASy Swiss-Prot
Match: B0BN49 (RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.2e-35
Identity = 122/351 (34.76%), Postives = 189/351 (53.85%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR +RVDHV+ Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDA--SSKWGHDK 180
            +D ++        V R  Q   C  GA    S   + + D      EDA  + K   DK
Sbjct: 121 SEDVDD--------VTRELQEKGC--GAKTPPSSPPEVSED------EDAKVTKKPKKDK 180

Query: 181 FDSRKNHDK---ELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHV 240
            + +K  +K   E   +    S +  +  +ET     +++  +  + +++SE + R    
Sbjct: 181 KEKKKKKEKEKTERPVQAELPSCSRSKTVKETDEQSAKKHSSKPSERAQKSECRER---- 240

Query: 241 GKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHD----DNRKDEKKSRKHDDGDEMK 300
               K+S     DG +  +   ++ + E K+ +  H+      R+ E+KSR  D G    
Sbjct: 241 ----KKSHSGSPDGRTSCRGRAEEPEWEAKKEKHKHEHKPSSRREGEEKSRDKDRGRSSG 300

Query: 301 LEDDRY--------RKEENRYRRNQDNELPQHSRRDYNTREED--RSSKRH 333
               R+         +  +R R    +   +H +  Y+   E    S +RH
Sbjct: 301 THSSRHHGHSEGRSHRSRSRSRSRSPDRSHRHKKHRYSHERESFHASDRRH 327

[Close]

BLAST of Chy8G152530 vs. ExPASy Swiss-Prot
Match: Q9Y388 (RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-33
Identity = 125/352 (35.51%), Postives = 184/352 (52.27%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++++ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR +RVDHVS Y+  ++
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
            ++ ++        V R  Q   C                  G      + S+   D+  
Sbjct: 121 SEEIDD--------VTRQLQEKGC------------------GARTPSPSLSESSEDEKP 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
           ++K H K+   K +K  +   +  RE        + PR     KE +    + H  K+ +
Sbjct: 181 TKK-HKKDKKEKKKKKKEK-EKADREVQAEQPSSSSPRR-KTVKEKDDTGPKKHSSKNSE 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           R+++      S+P+ G    K     S    D  R+ +K+  KH    E K    R  +E
Sbjct: 241 RAQK------SEPREGQKLPKSRTAYSGGAEDLERELKKEKPKH----EHKSSSRREARE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSK---RHGDKEYPSKLREDDKRRE 350
           E    R++      HS   YN R E RS +   R  DK +  K     + RE
Sbjct: 301 EKTRIRDRGRSSDAHSSW-YNGRSEGRSYRSRSRSRDKSHRHKRARRSRERE 312

[Close]

BLAST of Chy8G152530 vs. ExPASy TrEMBL
Match: A0A0A0KZW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.4e-207
Identity = 386/395 (97.72%), Postives = 390/395 (98.73%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
           SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDH GKDEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGNSDPKSGDDQYKGEEKRS RNHDDNRKDEK+SRKHD+ DEMKLEDDRYRKE
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKHDNDDEMKLEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDY TREEDRSSKRHGDKEYP KLREDDKRRERD+SVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDKRRERDVSVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 396
           YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR
Sbjct: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395

[Close]

BLAST of Chy8G152530 vs. ExPASy TrEMBL
Match: A0A5A7TUW9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00260 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.7e-193
Identity = 368/395 (93.16%), Postives = 374/395 (94.68%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
            RKN +KEL AKGRK SDNLGRHPRETSGSLRQENR +G DDSKESELKSREDH  KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGN DPKSGDD YK EEKRSRRNHDDNRKDEK+SRKHDD DEMK EDDRYRKE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGD EYP KLREDDKRRERDISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 396
           +RRENPDEKRDY SS GGRDSSSHSHRERNED  R
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of Chy8G152530 vs. ExPASy TrEMBL
Match: A0A1S3BLJ3 (zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.7e-193
Identity = 368/395 (93.16%), Postives = 374/395 (94.68%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
            RKN +KEL AKGRK SDNLGRHPRETSGSLRQENR +G DDSKESELKSREDH  KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGN DPKSGDD YK EEKRSRRNHDDNRKDEK+SRKHDD DEMK EDDRYRKE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGD EYP KLREDDKRRERDISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 396
           +RRENPDEKRDY SS GGRDSSSHSHRERNED  R
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of Chy8G152530 vs. ExPASy TrEMBL
Match: A0A1S3BLK5 (zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 2.2e-192
Identity = 365/390 (93.59%), Postives = 371/390 (95.13%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
            RKN +KEL AKGRK SDNLGRHPRETSGSLRQENR +G DDSKESELKSREDH  KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGN DPKSGDD YK EEKRSRRNHDDNRKDEK+SRKHDD DEMK EDDRYRKE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGD EYP KLREDDKRRERDISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERN 391
           +RRENPDEKRDY SS GGRDSSSHSHRERN
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERN 390

[Close]

BLAST of Chy8G152530 vs. ExPASy TrEMBL
Match: A0A5D3CVY9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00620 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.8e-192
Identity = 364/397 (91.69%), Postives = 379/397 (95.47%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
           SR NHDKEL AKGRK SD+LGRHPRETSGSLRQENRP+GWDDSK SELK REDH  +DEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNH--DDNRKDEKKSRKHDDGDEMKLEDDRYR 300
           RSRRYDLDGN DPK GDD+YK EEKRS RNH  DDNRKDEK+SRKHD+ +EMKLEDDRYR
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD+EY  KL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360

Query: 361 ESYRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 396
           ES+RRENP+EKRD+RSSHGGRDSSSHSH ERNEDRRR
Sbjct: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397

[Close]

BLAST of Chy8G152530 vs. NCBI nr
Match: XP_004147921.1 (zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypothetical protein Csa_018037 [Cucumis sativus])

HSP 1 Score: 731 bits (1888), Expect = 3.86e-265
Identity = 386/395 (97.72%), Postives = 390/395 (98.73%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
           SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDH GKDEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGNSDPKSGDDQYKGEEKRS RNHDDNRKDEK+SRKHD+ DEMKLEDDRYRKE
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKHDNDDEMKLEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDY TREEDRSSKRHGDKEYP KLREDDKRRERD+SVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDKRRERDVSVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395
           YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR
Sbjct: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395

[Close]

BLAST of Chy8G152530 vs. NCBI nr
Match: XP_008449221.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo] >KAA0045039.1 zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 684 bits (1766), Expect = 1.49e-246
Identity = 367/392 (93.62%), Postives = 373/392 (95.15%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
            RKN +KEL AKGRK SDNLGRHPRETSGSLRQENR +G DDSKESELKSREDH  KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGN DPKSGDD YK EEKRSRRNHDDNRKDEK+SRKHDD DEMK EDDRYRKE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGD EYP KLREDDKRRERDISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNED 392
           +RRENPDEKRDY SS GGRDSSSHSHRERNED
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERNED 392

[Close]

BLAST of Chy8G152530 vs. NCBI nr
Match: XP_008449231.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 681 bits (1757), Expect = 3.14e-245
Identity = 365/390 (93.59%), Postives = 371/390 (95.13%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
            RKN +KEL AKGRK SDNLGRHPRETSGSLRQENR +G DDSKESELKSREDH  KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMKLEDDRYRKE 300
           RSRRYDLDGN DPKSGDD YK EEKRSRRNHDDNRKDEK+SRKHDD DEMK EDDRYRKE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRSES 360
           ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGD EYP KLREDDKRRERDISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERN 390
           +RRENPDEKRDY SS GGRDSSSHSHRERN
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERN 390

[Close]

BLAST of Chy8G152530 vs. NCBI nr
Match: TYK15418.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 680 bits (1755), Expect = 7.62e-245
Identity = 364/397 (91.69%), Postives = 379/397 (95.47%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+EEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHVGKDEK 240
           SR NHDKEL AKGRK SD+LGRHPRETSGSLRQENRP+GWDDSK SELK REDH  +DEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSRRNH--DDNRKDEKKSRKHDDGDEMKLEDDRYR 300
           RSRRYDLDGN DPK GDD+YK EEKRS RNH  DDNRKDEK+SRKHD+ +EMKLEDDRYR
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD+EY  KL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360

Query: 361 ESYRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395
           ES+RRENP+EKRD+RSSHGGRDSSSHSH ERNEDRRR
Sbjct: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397

[Close]

BLAST of Chy8G152530 vs. NCBI nr
Match: TYJ96288.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 654 bits (1686), Expect = 2.89e-233
Identity = 367/461 (79.61%), Postives = 373/461 (80.91%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQ-- 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQ  
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQGN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HMRRVGMFEDTSLGPRFISQVENSAPIDVIKNSILSLKKYANHGTQNLCFLAGASLGVGK 120

Query: 121 -------YGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH 180
                  YGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH
Sbjct: 121 ASWQLAGYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDH 180

Query: 181 VSKYKKKEEEDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDAS 240
            SKYKKKEEED+EE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWG AEDAS
Sbjct: 181 ASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDAS 240

Query: 241 SKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSR 300
           SKWGHDKFD RKN +KEL AKGRK SDNLGRHPRETSGSLRQENR +G DDSKESELKSR
Sbjct: 241 SKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSR 300

Query: 301 EDHVGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDDNRKDEKKSRKHDDGDEMK 360
           EDH  KDEKRSRRYDLDGN DPKSGDD YK EEKRSRRNHDDNRKDEK+SRKHDD DEMK
Sbjct: 301 EDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMK 360

Query: 361 LEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDKEYPSKLREDDKRRERD 392
            EDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGD EYP KLREDDKRRERD
Sbjct: 361 SEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERD 420

[Close]

BLAST of Chy8G152530 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 275.4 bits (703), Expect = 7.1e-74
Identity = 185/357 (51.82%), Postives = 232/357 (64.99%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AF+AYEDQRST LAVDNLNGA +LGR ++VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDDEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
           ED+E  ++ REARGVCRAFQRGECTRG  CKFSHDE+RAA+TGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 181 SRKNHDKELH----AKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELK------- 240
             +   +        +G     +       T+G   +E+R   WD  K +  K       
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKKGGTSFG 240

Query: 241 SREDHVGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSRRNHDD---------NRKDEKK 300
           +R D     E++S R    G  D   GD  Y   ++R R + +D         + K++K+
Sbjct: 241 NRGDFKPDVEEKSYR----GRGD---GDASYGRPKERERVDREDMGPRSRDAYDMKEQKR 300

Query: 301 SRKHDDGDEMKLEDDRYRKEENRYRRNQDNELPQ-HSRRDYNTREE-DRSSKRHGDK 336
           S ++D+    +  D+     E++  R QD E  +  SRRD N REE DR S R  D+
Sbjct: 301 SGRYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREEKDRDSLRREDR 350

[Close]

BLAST of Chy8G152530 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-12
Identity = 34/105 (32.38%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 11  QKINSQ-EAALGISEEASWHA-KYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLI 70
           Q  N Q  A + +S  + + A +   S+ +F+GG+ Y + E  L   F +YGE+VD  +I
Sbjct: 13  QTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVI 72

Query: 71  RDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVS 114
            D+ TG+S+G+ FV +    + + A+  L+G  + GR+V+V++ +
Sbjct: 73  LDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 117

[Close]

BLAST of Chy8G152530 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-11
Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 38  VFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNL 97
           VFVG IPYD TE  L  +  + G +V   L+ D+ TGK KGY F  Y+D+ +   A  NL
Sbjct: 11  VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70

Query: 98  NGAQILGRIVRVDHVSKYKKKEEEDDEEE 127
              +I GR +RVD     K  ++  D+ +
Sbjct: 71  QSYEINGRQLRVDFAENDKGTDKTRDQSQ 99

[Close]

BLAST of Chy8G152530 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 59.7 bits (143), Expect = 6.2e-09
Identity = 28/101 (27.72%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 33  KDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNL 92
           K+ + +FVGG+  ++T+ DL   F+++G+I+D  ++ ++ TG+S+G+ F+ + D+R+ + 
Sbjct: 4   KEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDE 63

Query: 93  AVDNLNGAQILGRIVRVDHVSKYKKKEEEDDEEEQKKREAR 134
           ++  ++G     R++    V++ + K   DD E    R  R
Sbjct: 64  SIREMHGRDFGDRVI---SVNRAEPKLGRDDGESHGSRGGR 101

The following BLAST results are available for this feature:

BLAST of Chy8G152530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10B98	2.7e-78	54.55	Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SD61	1.0e-72	51.82	Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8R0F5	7.5e-36	35.99	RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=...	[more]
B0BN49	2.2e-35	34.76	RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=...	[more]
Q9Y388	2.7e-33	35.51	RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2	[more]

BLAST of Chy8G152530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZW7	1.4e-207	97.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1	[more]
A0A5A7TUW9	2.7e-193	93.16	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S3BLJ3	2.7e-193	93.16	zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX...	[more]
A0A1S3BLK5	2.2e-192	93.59	zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX...	[more]
A0A5D3CVY9	3.8e-192	91.69	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]

BLAST of Chy8G152530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147921.1	3.86e-265	97.72	zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypo...	[more]
XP_008449221.1	1.49e-246	93.62	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumi...	[more]
XP_008449231.1	3.14e-245	93.59	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumi...	[more]
TYK15418.1	7.62e-245	91.69	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]
TYJ96288.1	2.89e-233	79.61	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]

BLAST of Chy8G152530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47120.1	7.1e-74	51.82	RNA recognition motif (RRM)-containing protein	[more]
AT5G61030.1	1.6e-12	32.38	glycine-rich RNA-binding protein 3	[more]
AT1G71800.1	2.3e-11	39.33	cleavage stimulating factor 64	[more]
AT5G04280.1	6.2e-09	27.72	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	GENE3D	4.10.1000.10		coord: 118..201 e-value: 1.5E-7 score: 33.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..395
None	No IPR available	PANTHER	PTHR45880:SF1	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..310
None	No IPR available	PANTHER	PTHR45880	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..310
None	No IPR available	CDD	cd12411	RRM_ist3_like	coord: 27..113 e-value: 6.08825E-57 score: 179.371
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 132..156 e-value: 0.001 score: 28.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 135..155 e-value: 7.8E-5 score: 22.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 130..157 score: 14.802481
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 37..110 e-value: 3.3E-26 score: 103.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..106 e-value: 3.4E-21 score: 74.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 36..114 score: 19.877102
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..111 e-value: 1.5E-27 score: 98.3
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 133..155
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 27..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G152530.1	Chy8G152530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005686	U2 snRNP
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding