Chy8G152290 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G152290
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH08: 14104232 .. 14104806 (+)
RNA-Seq Expression	Chy8G152290
Synteny	Chy8G152290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACGGACGCTCCTCGCCGCCGAATCTCAGTCGAACGCTCCTCGCCACCTAATCGCAGAAGCTCTCCCACTCCCCGCCAAATCACAGAAGCTAACCCACTCCCTCGCTCACTTGTCGTAAGTCGTCTCCTTCCCTGCTCGCCGCTGCTCACCCCAAGTAAGTTTAACTTCAGTTTATTTTTCTTTTTCAAGTATACTAGATCTTATTGTGGTATGTTTTGAGGTTGAAAATATAGTAAATTTGAAATAATTAAAAATTTAGTACATTGTGTGTTTGGAGTTTGAAAATATGGTGACTTTAGTTTGAAATATGATGGTTGTGTTTTAAGTTCAAAAATATGTAGTTTGATCTTCCTTTTTTCAGCTGATCTCTTATTTGTCGCATGAGAATGATAGAAAATGAAACCTCACCCTTTTGTTTGTTTTTAGATTTTGAGATTAATGTTTTAGGCTACCCCAAAGTGAAGGTTCTTATGGAGAAGATGTATCTTATTGGAATCGGAAAATACTATTGCCTCTTTTGTTCCAAGGTTGTTGCTTCTCTTGTTTCTACATTTTGTGGTGTGAATTAA

mRNA sequence

ATGCAAACGGACGCTCCTCGCCGCCGAATCTCAGTCGAACGCTCCTCGCCACCTAATCGCAGAAGCTCTCCCACTCCCCGCCAAATCACAGAAGCTAACCCACTCCCTCGCTCACTTGTCGTAAGTCGTCTCCTTCCCTGCTCGCCGCTGCTCACCCCAAATTTTGAGATTAATGTTTTAGGCTACCCCAAAGTGAAGGTTCTTATGGAGAAGATGTATCTTATTGGAATCGGAAAATACTATTGCCTCTTTTGTTCCAAGGTTGTTGCTTCTCTTGTTTCTACATTTTGTGGTGTGAATTAA

Coding sequence (CDS)

ATGCAAACGGACGCTCCTCGCCGCCGAATCTCAGTCGAACGCTCCTCGCCACCTAATCGCAGAAGCTCTCCCACTCCCCGCCAAATCACAGAAGCTAACCCACTCCCTCGCTCACTTGTCGTAAGTCGTCTCCTTCCCTGCTCGCCGCTGCTCACCCCAAATTTTGAGATTAATGTTTTAGGCTACCCCAAAGTGAAGGTTCTTATGGAGAAGATGTATCTTATTGGAATCGGAAAATACTATTGCCTCTTTTGTTCCAAGGTTGTTGCTTCTCTTGTTTCTACATTTTGTGGTGTGAATTAA

Protein sequence

MQTDAPRRRISVERSSPPNRRSSPTPRQITEANPLPRSLVVSRLLPCSPLLTPNFEINVLGYPKVKVLMEKMYLIGIGKYYCLFCSKVVASLVSTFCGVN*

Homology

The following BLAST results are available for this feature:

BLAST of Chy8G152290 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G152290 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G152290 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G152290 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G152290.1	Chy8G152290.1	mRNA