Chy8G151980 (gene) Cucumber (hystrix) v1

Overview
NameChy8G151980
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionregulatory-associated protein of TOR 1
LocationchrH08: 13714712 .. 13715049 (+)
RNA-Seq ExpressionChy8G151980
SyntenyChy8G151980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTGGGTGATTTGATGGCTTCTCGGATTTCTCAATCTTCTTTAGCCGTAGTCTCCAATCACTTGGATGACTGTTCTTCTTCTAACCACGACGACGATGGGGATTTAATTTCTCTCAGAAGAGATTCTGAGGTTGCTAGTAGTAGTTATGCCAATGCTGCTGTTACTACTGCTACTACCATGGTTTACTTGCCCCAAACTATAGTCTTGTGTGAGCTTCGTCATGATGCCTTTGAGGCTTGCTTGCCTGCTGGCCCATCTGATACCGGATTGGTCTCTAAATGGAGACCTAAAGACCGAGTAAGTAACAGCAACCACAGGAAGATAGTGCAAAG

mRNA sequence

ATGGCATTGGGTGATTTGATGGCTTCTCGGATTTCTCAATCTTCTTTAGCCGTAGTCTCCAATCACTTGGATGACTGTTCTTCTTCTAACCACGACGACGATGGGGATTTAATTTCTCTCAGAAGAGATTCTGAGGTTGCTAGTAGTAGTTATGCCAATGCTGCTGTTACTACTGCTACTACCATGGTTTACTTGCCCCAAACTATAGTCTTGTGTGAGCTTCGTCATGATGCCTTTGAGGCTTGCTTGCCTGCTGGCCCATCTGATACCGGATTGGTCTCTAAATGGAGACCTAAAGACCGAGTAAGTAACAGCAACCACAGGAAGATAGTGCAAAG

Coding sequence (CDS)

ATGGCATTGGGTGATTTGATGGCTTCTCGGATTTCTCAATCTTCTTTAGCCGTAGTCTCCAATCACTTGGATGACTGTTCTTCTTCTAACCACGACGACGATGGGGATTTAATTTCTCTCAGAAGAGATTCTGAGGTTGCTAGTAGTAGTTATGCCAATGCTGCTGTTACTACTGCTACTACCATGGTTTACTTGCCCCAAACTATAGTCTTGTGTGAGCTTCGTCATGATGCCTTTGAGGCTTGCTTGCCTGCTGGCCCATCTGATACCGGATTGGTCTCTAAATGGAGACCTAAAGACCGAGTAAGTAACAGCAACCACAGGAAGATAGTGCAAAG

Protein sequence

MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTATTMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRVSNSNHRKIVQX
Homology
BLAST of Chy8G151980 vs. ExPASy Swiss-Prot
Match: Q93YQ1 (Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana OX=3702 GN=RAPTOR1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.8e-22
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHL--DDCSSSNHDDDGDLISLRRDSEV-ASSSYANA--- 60
           MALGDLM SR SQSS+++VSNH   +DC SS+  DDGD  S R+DSE  +SSSY N    
Sbjct: 1   MALGDLMVSRFSQSSVSLVSNHRYDEDCVSSH--DDGD--SRRKDSEAKSSSSYGNGTTE 60

Query: 61  AVTTATTMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
              TAT+M YLPQTIVLCELRHDA EA  P G S+  LV KWR K+R+
Sbjct: 61  GAATATSMAYLPQTIVLCELRHDASEASAPLGTSEIVLVPKWRLKERM 104

BLAST of Chy8G151980 vs. ExPASy Swiss-Prot
Match: Q9LZW9 (Regulatory-associated protein of TOR 2 OS=Arabidopsis thaliana OX=3702 GN=RAPTOR2 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16
Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHL----DDCSSSNHDDDGDLISLRRDSEVASSSYANAAV 60
           MALGDLM SR+SQSS+ VV+NHL    D+C+SS HDD    +S+     VASSSY N  +
Sbjct: 1   MALGDLMVSRLSQSSVTVVTNHLYDDDDNCASSAHDD--SRVSIIASPRVASSSYEN--L 60

Query: 61  TTATTMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
           + AT+M YLPQT+VLC+LRHD          SD     +WR K+R+
Sbjct: 61  SAATSMAYLPQTLVLCDLRHD--------DASDIVQPPRWRLKERM 94

BLAST of Chy8G151980 vs. ExPASy Swiss-Prot
Match: Q0IQN5 (Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RAPTOR2 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07
Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 0

Query: 1   MALGDLMASRI--SQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTT 60
           MALGDLMASR+  S SS A  S  L +   +NH  D  L                     
Sbjct: 1   MALGDLMASRLVHSSSSSAAPSAALPN-HHTNHLVDDHLPVENGPDPRRDVPDEEPPPPP 60

Query: 61  ATTMVYLPQTIVLCELRHDAFE--ACLPAGPSDTGLVSKWRPKDRV 103
              +  LPQ +VLCE RH+ F+  A   AGPS +G VSKWRPKDR+
Sbjct: 61  PPQVALLPQVVVLCEQRHEGFDEAAAAAAGPSTSGPVSKWRPKDRM 105

BLAST of Chy8G151980 vs. ExPASy TrEMBL
Match: A0A5D3BDX7 (Regulatory-associated protein of TOR 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00010 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRM 102

BLAST of Chy8G151980 vs. ExPASy TrEMBL
Match: A0A0A0L034 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G325540 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRM 102

BLAST of Chy8G151980 vs. ExPASy TrEMBL
Match: A0A1S4E5C0 (regulatory-associated protein of TOR 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503193 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRL 102

BLAST of Chy8G151980 vs. ExPASy TrEMBL
Match: A0A1S4E619 (regulatory-associated protein of TOR 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503193 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR 102
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR 101

BLAST of Chy8G151980 vs. ExPASy TrEMBL
Match: A0A6J1CS41 (regulatory-associated protein of TOR 1 OS=Momordica charantia OX=3673 GN=LOC111013788 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDC+SSNH++DGDL+SLRRDSE ASSSY NAAV+TAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCASSNHEEDGDLVSLRRDSETASSSYGNAAVSTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
           TMVYLPQTIVLCELRHDAFEACLPAGPSD+GLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDSGLVSKWRPKDRM 102

BLAST of Chy8G151980 vs. NCBI nr
Match: XP_016903419.1 (PREDICTED: regulatory-associated protein of TOR 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 198 bits (503), Expect = 2.61e-63
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 102
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRL 102

BLAST of Chy8G151980 vs. NCBI nr
Match: XP_016903420.1 (PREDICTED: regulatory-associated protein of TOR 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 197 bits (501), Expect = 4.49e-63
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR 101
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR 101

BLAST of Chy8G151980 vs. NCBI nr
Match: XP_004149929.1 (regulatory-associated protein of TOR 1 [Cucumis sativus] >KGN54429.1 hypothetical protein Csa_011923 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 4.23e-56
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 102
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRM 102

BLAST of Chy8G151980 vs. NCBI nr
Match: KAA0050391.1 (regulatory-associated protein of TOR 1 isoform X1 [Cucumis melo var. makuwa] >TYJ97982.1 regulatory-associated protein of TOR 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 4.23e-56
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 102
           TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRM 102

BLAST of Chy8G151980 vs. NCBI nr
Match: XP_022144003.1 (regulatory-associated protein of TOR 1 [Momordica charantia])

HSP 1 Score: 187 bits (475), Expect = 2.51e-52
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHLDDCSSSNHDDDGDLISLRRDSEVASSSYANAAVTTAT 60
           MALGDLMASRISQSSLAVVSNHLDDC+SSNH++DGDL+SLRRDSE ASSSY NAAV+TAT
Sbjct: 1   MALGDLMASRISQSSLAVVSNHLDDCASSNHEEDGDLVSLRRDSETASSSYGNAAVSTAT 60

Query: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 102
           TMVYLPQTIVLCELRHDAFEACLPAGPSD+GLVSKWRPKDR+
Sbjct: 61  TMVYLPQTIVLCELRHDAFEACLPAGPSDSGLVSKWRPKDRM 102

BLAST of Chy8G151980 vs. TAIR 10
Match: AT3G08850.1 (HEAT repeat ;WD domain, G-beta repeat protein protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.2e-23
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHL--DDCSSSNHDDDGDLISLRRDSEV-ASSSYANA--- 60
           MALGDLM SR SQSS+++VSNH   +DC SS+  DDGD  S R+DSE  +SSSY N    
Sbjct: 1   MALGDLMVSRFSQSSVSLVSNHRYDEDCVSSH--DDGD--SRRKDSEAKSSSSYGNGTTE 60

Query: 61  AVTTATTMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
              TAT+M YLPQTIVLCELRHDA EA  P G S+  LV KWR K+R+
Sbjct: 61  GAATATSMAYLPQTIVLCELRHDASEASAPLGTSEIVLVPKWRLKERM 104

BLAST of Chy8G151980 vs. TAIR 10
Match: AT5G01770.1 (HEAT repeat ;WD domain, G-beta repeat protein protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-17
Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 0

Query: 1   MALGDLMASRISQSSLAVVSNHL----DDCSSSNHDDDGDLISLRRDSEVASSSYANAAV 60
           MALGDLM SR+SQSS+ VV+NHL    D+C+SS HDD    +S+     VASSSY N  +
Sbjct: 1   MALGDLMVSRLSQSSVTVVTNHLYDDDDNCASSAHDD--SRVSIIASPRVASSSYEN--L 60

Query: 61  TTATTMVYLPQTIVLCELRHDAFEACLPAGPSDTGLVSKWRPKDRV 103
           + AT+M YLPQT+VLC+LRHD          SD     +WR K+R+
Sbjct: 61  SAATSMAYLPQTLVLCDLRHD--------DASDIVQPPRWRLKERM 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q93YQ18.8e-2261.11Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana OX=3702 GN=RAPTOR... [more]
Q9LZW94.2e-1650.94Regulatory-associated protein of TOR 2 OS=Arabidopsis thaliana OX=3702 GN=RAPTOR... [more]
Q0IQN51.6e-0742.45Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Match NameE-valueIdentityDescription
A0A5D3BDX71.6e-4799.02Regulatory-associated protein of TOR 1 isoform X1 OS=Cucumis melo var. makuwa OX... [more]
A0A0A0L0341.6e-4799.02WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G... [more]
A0A1S4E5C01.6e-4799.02regulatory-associated protein of TOR 1-like isoform X1 OS=Cucumis melo OX=3656 G... [more]
A0A1S4E6192.8e-47100.00regulatory-associated protein of TOR 1-like isoform X2 OS=Cucumis melo OX=3656 G... [more]
A0A6J1CS412.9e-4491.18regulatory-associated protein of TOR 1 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
Match NameE-valueIdentityDescription
XP_016903419.12.61e-6399.02PREDICTED: regulatory-associated protein of TOR 1-like isoform X1 [Cucumis melo][more]
XP_016903420.14.49e-63100.00PREDICTED: regulatory-associated protein of TOR 1-like isoform X2 [Cucumis melo][more]
XP_004149929.14.23e-5699.02regulatory-associated protein of TOR 1 [Cucumis sativus] >KGN54429.1 hypothetica... [more]
KAA0050391.14.23e-5699.02regulatory-associated protein of TOR 1 isoform X1 [Cucumis melo var. makuwa] >TY... [more]
XP_022144003.12.51e-5291.18regulatory-associated protein of TOR 1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT3G08850.16.2e-2361.11HEAT repeat ;WD domain, G-beta repeat protein protein [more]
AT5G01770.13.0e-1750.94HEAT repeat ;WD domain, G-beta repeat protein protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..112
NoneNo IPR availablePANTHERPTHR12848:SF18BNAA05G37130D PROTEINcoord: 1..103
IPR004083Regulatory associated protein of TORPANTHERPTHR12848REGULATORY-ASSOCIATED PROTEIN OF MTORcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G151980.1Chy8G151980.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071230 cellular response to amino acid stimulus
biological_process GO:0009267 cellular response to starvation
biological_process GO:0030307 positive regulation of cell growth
biological_process GO:0071902 positive regulation of protein serine/threonine kinase activity
biological_process GO:0010506 regulation of autophagy
biological_process GO:0031929 TOR signaling
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031931 TORC1 complex
molecular_function GO:0030674 protein-macromolecule adaptor activity