Chy8G151800 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G151800
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-H2 finger protein ATL74
Location	chrH08: 13311319 .. 13311867 (-)
RNA-Seq Expression	Chy8G151800
Synteny	Chy8G151800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATTTCTTCTCAAAATATATCCCCAAATACCCACCACACCCCCACCAAATATGTTCAAGGTCCACCGCCACCACCATTTCCAGCCGAGACCACTCTCGACAACAACATGGTGATCGTCTTAGCAGCTCTGCTCTATGCCCTCCTCGGCGCACTCTTCATGAACTTAATTCTCCGCTGCATATGGCGGCGGTGGAGGAGTGCCGCCGCGGCAAGAGTCGAGAGGCAGGAATTGGAAGAGATTCCGGTGGCGGTTTACGAAGGGGAAGGGAGAATGAGAATCAGAGGTACGGAATGTGCGATTTGTTTAGGTGAATTTGAAAATGGCGAAGATTTGAGGATTATGCCCAAATGTAACCATGGATTTCATGTTCGGTGTATTGATGCTTGGCTAGTTTCCCATTCCTCTTGCCCTAATTGTCGGCATACTCTGCCAGTGAAGACGGTAGCGGATGGTGGCAGTGGCAGTGGCGGAGTTAGTGAGGTGCGACGGGGGGGGAATGATGGGTCGGATGATATAATTATAATAGTGATCGCAGCCATTTAG

mRNA sequence

ATGTCCATTTCTTCTCAAAATATATCCCCAAATACCCACCACACCCCCACCAAATATGTTCAAGGTCCACCGCCACCACCATTTCCAGCCGAGACCACTCTCGACAACAACATGGTGATCGTCTTAGCAGCTCTGCTCTATGCCCTCCTCGGCGCACTCTTCATGAACTTAATTCTCCGCTGCATATGGCGGCGGTGGAGGAGTGCCGCCGCGGCAAGAGTCGAGAGGCAGGAATTGGAAGAGATTCCGGTGGCGGTTTACGAAGGGGAAGGGAGAATGAGAATCAGAGTTTCCCATTCCTCTTGCCCTAATTGTCGGCATACTCTGCCAGTGAAGACGGTAGCGGATGGTGGCAGTGGCAGTGGCGGAGTTAGTGAGGTGCGACGGGGGGGGAATGATGGGTCGGATGATATAATTATAATAGTGATCGCAGCCATTTAG

Coding sequence (CDS)

ATGTCCATTTCTTCTCAAAATATATCCCCAAATACCCACCACACCCCCACCAAATATGTTCAAGGTCCACCGCCACCACCATTTCCAGCCGAGACCACTCTCGACAACAACATGGTGATCGTCTTAGCAGCTCTGCTCTATGCCCTCCTCGGCGCACTCTTCATGAACTTAATTCTCCGCTGCATATGGCGGCGGTGGAGGAGTGCCGCCGCGGCAAGAGTCGAGAGGCAGGAATTGGAAGAGATTCCGGTGGCGGTTTACGAAGGGGAAGGGAGAATGAGAATCAGAGTTTCCCATTCCTCTTGCCCTAATTGTCGGCATACTCTGCCAGTGAAGACGGTAGCGGATGGTGGCAGTGGCAGTGGCGGAGTTAGTGAGGTGCGACGGGGGGGGAATGATGGGTCGGATGATATAATTATAATAGTGATCGCAGCCATTTAG

Protein sequence

MSISSQNISPNTHHTPTKYVQGPPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRRWRSAAAARVERQELEEIPVAVYEGEGRMRIRVSHSSCPNCRHTLPVKTVADGGSGSGGVSEVRRGGNDGSDDIIIIVIAAI*

Homology

[Close]

BLAST of Chy8G151800 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 46/128 (35.94%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 28  FPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWR----RWRSAAA------ARVERQ 87
           +  +   D NMVI+LAALL AL+ AL +N ILRC  R       SAAA      A ++++
Sbjct: 24  YTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKR 83

Query: 88  ELEEIPVAVYEGEGRMRIR------------------------------------VSHSS 110
           EL++ PVA Y G G ++I                                     VSHSS
Sbjct: 84  ELKKFPVAEY-GSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSS 143

[Close]

BLAST of Chy8G151800 vs. ExPASy TrEMBL
Match: A0A0A0L057 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G333870 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58
Identity = 131/182 (71.98%), Postives = 136/182 (74.73%), Query Frame = 0


Query: 1   MSISSQNISPNTHHTPTKYVQGPPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILR 60
           MSISSQ ISPNTHHTPTKYVQGPPPP FPA TTLDNNMVI+LAALLYAL+GAL MN ILR
Sbjct: 1   MSISSQTISPNTHHTPTKYVQGPPPPAFPAHTTLDNNMVILLAALLYALVGALVMNSILR 60

Query: 61  CIWRRWRSAAAARVERQELEEIPVAVYEGEGRMRIR------------------------ 120
           CIWRRW SAAAARVERQELEEIPVAVYEGEGRM+IR                        
Sbjct: 61  CIWRRWWSAAAARVERQELEEIPVAVYEGEGRMKIRGTECAICLGEFESGEGLRIMPKCN 120

Query: 121 ------------VSHSSCPNCRHTLPVKTVADGGSGSGGVSEVRRGGNDGSDDIIIIVIA 147
                       VSHSSCPNCRH+LPVKTVADG  GSGGV EVRR GNDGSDDIIII+IA
Sbjct: 121 HGFHVHCIDAWLVSHSSCPNCRHSLPVKTVADG--GSGGVGEVRRAGNDGSDDIIIILIA 180

[Close]

BLAST of Chy8G151800 vs. ExPASy TrEMBL
Match: A0A5A7SL64 (RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00400 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 96/164 (58.54%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 25  PPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRRWRSAAAARVERQELEEIPV 84
           PPPFPAET L NNMVI LAALLYAL+GAL +N I+RC+WRRW   AAARVERQELEEIPV
Sbjct: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRW-WRAAARVERQELEEIPV 71

Query: 85  AVYEGEGRMRIR------------------------------------VSHSSCPNCRHT 144
           AV+EGEGRMR+R                                    VSHSSCPNCRH+
Sbjct: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPRCNHGFHVHCIDAWLVSHSSCPNCRHS 131

Query: 145 LPVKTVADGGSGSGGVSEVRRGGNDG------SDDIIIIVIAAI 147
           +P+KTV DG  GSGG+SE+RR GN        SDDIIII+IAAI
Sbjct: 132 VPLKTVGDG--GSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of Chy8G151800 vs. ExPASy TrEMBL
Match: A0A5D3CEJ5 (RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00540 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.9e-35
Identity = 96/164 (58.54%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 25  PPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRRWRSAAAARVERQELEEIPV 84
           PPPFPAET L NNMVI LAALLYAL+GAL +N I+RC+WRRW S AAARVERQELE IPV
Sbjct: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWS-AAARVERQELEAIPV 71

Query: 85  AVYEGEGRMRIR------------------------------------VSHSSCPNCRHT 144
           AV+EGEGRMR+R                                    VSHSSCPNCRH+
Sbjct: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPNCRHS 131

Query: 145 LPVKTVADGGSGSGGVSEVRRGGNDG------SDDIIIIVIAAI 147
           +P+KTV DG  GSGG+SE+RR GN        SDDIIII+IAAI
Sbjct: 132 VPLKTVGDG--GSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of Chy8G151800 vs. ExPASy TrEMBL
Match: A0A1S3CKD5 (RING-H2 finger protein ATL74 OS=Cucumis melo OX=3656 GN=LOC103501464 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.9e-35
Identity = 96/164 (58.54%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 25  PPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRRWRSAAAARVERQELEEIPV 84
           PPPFPAET L NNMVI LAALLYAL+GAL +N I+RC+WRRW S AAARVERQELE IPV
Sbjct: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWS-AAARVERQELEAIPV 71

Query: 85  AVYEGEGRMRIR------------------------------------VSHSSCPNCRHT 144
           AV+EGEGRMR+R                                    VSHSSCPNCRH+
Sbjct: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPNCRHS 131

Query: 145 LPVKTVADGGSGSGGVSEVRRGGNDG------SDDIIIIVIAAI 147
           +P+KTV DG  GSGG+SE+RR GN        SDDIIII+IAAI
Sbjct: 132 VPLKTVGDG--GSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of Chy8G151800 vs. ExPASy TrEMBL
Match: A0A6J1CR99 (RING-H2 finger protein ATL74-like OS=Momordica charantia OX=3673 GN=LOC111013867 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.3e-16
Identity = 78/170 (45.88%), Postives = 89/170 (52.35%), Query Frame = 0


Query: 23  PPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCI-WRRW-----RSAAAARVER 82
           P PP   +E  LD N+VIVLAALL AL+GAL +N ILRC+  RRW      SAA A V+R
Sbjct: 13  PSPPSNTSEKNLDFNVVIVLAALLCALVGALAVNSILRCVARRRWGELSRESAALAGVKR 72

Query: 83  Q-ELEEIPVAVYEGEGRMRIR------------------------------------VSH 142
           + ELEEIPVAV+ G    RIR                                    VSH
Sbjct: 73  RGELEEIPVAVFAGAAEGRIRGTECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSH 132

Query: 143 SSCPNCRHTLPVKTVADGGSGSGGVSEVRRGGNDGSDDI---IIIVIAAI 147
           SSCPNCRH+L  KT  DGG G     EVRR  N  S  +   III+IAAI
Sbjct: 133 SSCPNCRHSLLQKTAEDGGGG-----EVRRPENPDSGQLPGDIIILIAAI 177

[Close]

BLAST of Chy8G151800 vs. NCBI nr
Match: XP_011653722.1 (RING-H2 finger protein ATL74 isoform X1 [Cucumis sativus] >KGN54449.1 hypothetical protein Csa_012932 [Cucumis sativus])

HSP 1 Score: 238 bits (607), Expect = 1.10e-77
Identity = 131/182 (71.98%), Postives = 136/182 (74.73%), Query Frame = 0


Query: 1   MSISSQNISPNTHHTPTKYVQGPPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILR 60
           MSISSQ ISPNTHHTPTKYVQGPPPP FPA TTLDNNMVI+LAALLYAL+GAL MN ILR
Sbjct: 1   MSISSQTISPNTHHTPTKYVQGPPPPAFPAHTTLDNNMVILLAALLYALVGALVMNSILR 60

Query: 61  CIWRRWRSAAAARVERQELEEIPVAVYEGEGRMRIR------------------------ 120
           CIWRRW SAAAARVERQELEEIPVAVYEGEGRM+IR                        
Sbjct: 61  CIWRRWWSAAAARVERQELEEIPVAVYEGEGRMKIRGTECAICLGEFESGEGLRIMPKCN 120

Query: 121 ------------VSHSSCPNCRHTLPVKTVADGGSGSGGVSEVRRGGNDGSDDIIIIVIA 146
                       VSHSSCPNCRH+LPVKTVADGGSG  GV EVRR GNDGSDDIIII+IA
Sbjct: 121 HGFHVHCIDAWLVSHSSCPNCRHSLPVKTVADGGSG--GVGEVRRAGNDGSDDIIIILIA 180

[Close]

BLAST of Chy8G151800 vs. NCBI nr
Match: XP_031739744.1 (RING-H2 finger protein ATL74 isoform X2 [Cucumis sativus])

HSP 1 Score: 174 bits (442), Expect = 1.06e-53
Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MSISSQNISPNTHHTPTKYVQGPPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILR 60
          MSISSQ ISPNTHHTPTKYVQGPPPP FPA TTLDNNMVI+LAALLYAL+GAL MN ILR
Sbjct: 1  MSISSQTISPNTHHTPTKYVQGPPPPAFPAHTTLDNNMVILLAALLYALVGALVMNSILR 60

Query: 61 CIWRRWRSAAAARVERQELEEIPVAVYEGEGRMRIRV 97
          CIWRRW SAAAARVERQELEEIPVAVYEGEGRM+IRV
Sbjct: 61 CIWRRWWSAAAARVERQELEEIPVAVYEGEGRMKIRV 97

[Close]

BLAST of Chy8G151800 vs. NCBI nr
Match: KAA0025403.1 (RING-H2 finger protein ATL74 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (406), Expect = 3.14e-47
Identity = 96/164 (58.54%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 25  PPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRRWRSAAAARVERQELEEIPV 84
           PPPFPAET L NNMVI LAALLYAL+GAL +N I+RC+WRRW  AAA RVERQELEEIPV
Sbjct: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWRAAA-RVERQELEEIPV 71

Query: 85  AVYEGEGRMRIR------------------------------------VSHSSCPNCRHT 144
           AV+EGEGRMR+R                                    VSHSSCPNCRH+
Sbjct: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPRCNHGFHVHCIDAWLVSHSSCPNCRHS 131

Query: 145 LPVKTVADGGSGSGGVSEVRRGGNDG------SDDIIIIVIAAI 146
           +P+KTV DGGSG  G+SE+RR GN        SDDIIII+IAAI
Sbjct: 132 VPLKTVGDGGSG--GISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of Chy8G151800 vs. NCBI nr
Match: XP_008463261.1 (PREDICTED: RING-H2 finger protein ATL74 [Cucumis melo] >TYK09770.1 RING-H2 finger protein ATL74 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (405), Expect = 4.46e-47
Identity = 96/164 (58.54%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 25  PPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRRWRSAAAARVERQELEEIPV 84
           PPPFPAET L NNMVI LAALLYAL+GAL +N I+RC+WRRW SAAA RVERQELE IPV
Sbjct: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAA-RVERQELEAIPV 71

Query: 85  AVYEGEGRMRIR------------------------------------VSHSSCPNCRHT 144
           AV+EGEGRMR+R                                    VSHSSCPNCRH+
Sbjct: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPNCRHS 131

Query: 145 LPVKTVADGGSGSGGVSEVRRGGNDG------SDDIIIIVIAAI 146
           +P+KTV DGGSG  G+SE+RR GN        SDDIIII+IAAI
Sbjct: 132 VPLKTVGDGGSG--GISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of Chy8G151800 vs. NCBI nr
Match: XP_022144089.1 (RING-H2 finger protein ATL74-like [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 4.26e-22
Identity = 78/170 (45.88%), Postives = 89/170 (52.35%), Query Frame = 0


Query: 23  PPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWRR-W-----RSAAAARVER 82
           P PP   +E  LD N+VIVLAALL AL+GAL +N ILRC+ RR W      SAA A V+R
Sbjct: 13  PSPPSNTSEKNLDFNVVIVLAALLCALVGALAVNSILRCVARRRWGELSRESAALAGVKR 72

Query: 83  Q-ELEEIPVAVYEGEGRMRIR------------------------------------VSH 142
           + ELEEIPVAV+ G    RIR                                    VSH
Sbjct: 73  RGELEEIPVAVFAGAAEGRIRGTECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSH 132

Query: 143 SSCPNCRHTLPVKTVADGGSGSGGVSEVRRGGNDGSDDI---IIIVIAAI 146
           SSCPNCRH+L  KT  DGG G     EVRR  N  S  +   III+IAAI
Sbjct: 133 SSCPNCRHSLLQKTAEDGGGG-----EVRRPENPDSGQLPGDIIILIAAI 177

[Close]

BLAST of Chy8G151800 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 46/128 (35.94%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 28  FPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWR----RWRSAAA------ARVERQ 87
           +  +   D NMVI+LAALL AL+ AL +N ILRC  R       SAAA      A ++++
Sbjct: 24  YTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKR 83

Query: 88  ELEEIPVAVYEGEGRMRIR------------------------------------VSHSS 110
           EL++ PVA Y G G ++I                                     VSHSS
Sbjct: 84  ELKKFPVAEY-GSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSS 143

[Close]

BLAST of Chy8G151800 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04
Identity = 41/136 (30.15%), Postives = 59/136 (43.38%), Query Frame = 0


Query: 33  TLDNNMVIVLAALLYALLGALFMNLILRCIWRRWR------------SAAAARVERQELE 92
           ++D +MVI+LAALL AL+ AL +N +LRC+ R  R            +  A  ++++ L+
Sbjct: 36  SMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKRALK 95

Query: 93  EIPVAVYEGEGRMR----------------IRV------------------SHSSCPNCR 123
            IPV  Y  E +M+                +RV                  SHSSCP CR
Sbjct: 96  VIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155

[Close]

BLAST of Chy8G151800 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 41.6 bits (96), Expect = 6.4e-04
Identity = 32/85 (37.65%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 23  PPPPPFPAETTLDNNMVIVLAALLYALLGALFMNLILRCIWR------------------ 82
           P P     +T  D NMVI+LAALL AL+ AL +N  LRC+ R                  
Sbjct: 18  PKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNAN 77

Query: 83  --RWRSAAAARVERQELEEIPVAVY 88
               R AAA  +++Q L++IPV +Y
Sbjct: 78  ANLGRLAAATGLKKQALKQIPVGLY 102

The following BLAST results are available for this feature:

BLAST of Chy8G151800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZV8	1.8e-06	35.94	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]

BLAST of Chy8G151800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L057	1.6e-58	71.98	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G333870 P...	[more]
A0A5A7SL64	1.4e-35	58.54	RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3CEJ5	1.9e-35	58.54	RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CKD5	1.9e-35	58.54	RING-H2 finger protein ATL74 OS=Cucumis melo OX=3656 GN=LOC103501464 PE=4 SV=1	[more]
A0A6J1CR99	3.3e-16	45.88	RING-H2 finger protein ATL74-like OS=Momordica charantia OX=3673 GN=LOC111013867...	[more]

BLAST of Chy8G151800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653722.1	1.10e-77	71.98	RING-H2 finger protein ATL74 isoform X1 [Cucumis sativus] >KGN54449.1 hypothetic...	[more]
XP_031739744.1	1.06e-53	90.72	RING-H2 finger protein ATL74 isoform X2 [Cucumis sativus]	[more]
KAA0025403.1	3.14e-47	58.54	RING-H2 finger protein ATL74 [Cucumis melo var. makuwa]	[more]
XP_008463261.1	4.46e-47	58.54	PREDICTED: RING-H2 finger protein ATL74 [Cucumis melo] >TYK09770.1 RING-H2 finge...	[more]
XP_022144089.1	4.26e-22	45.88	RING-H2 finger protein ATL74-like [Momordica charantia]	[more]

BLAST of Chy8G151800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01880.1	1.3e-07	35.94	RING/U-box superfamily protein	[more]
AT5G05280.1	1.3e-04	30.15	RING/U-box superfamily protein	[more]
AT3G10910.1	6.4e-04	37.65	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 30..92 coord: 97..119
None	No IPR available	PANTHER	PTHR45798:SF44	RING-H2 FINGER PROTEIN ATL74	coord: 30..92 coord: 97..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G151800.1	Chy8G151800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane