Chy8G151480 (gene) Cucumber (hystrix) v1

Overview
NameChy8G151480
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH08: 12948883 .. 12949101 (-)
RNA-Seq ExpressionChy8G151480
SyntenyChy8G151480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACAAAGCGACTCCGGTCTGGGCGTGCAAAGTGGATAGGCTCGGCCCGAGAACGAAACGGAGAAGCTACAGCTGAACTGAGCAAAGACGGCTTAATGGTCTACGAGAAGCTTGTGATGAAGAGGACGACGCCGACGCATAACAACAAGATGCTACGTCGTTCAGCTTGGGCCAATAACATAACGACTGGAGACGATGAGCTTTGGCTTCAATAG

mRNA sequence

ATGGAGACAAAGCGACTCCGGTCTGGGCGTGCAAAGTGGATAGGCTCGGCCCGAGAACGAAACGGAGAAGCTACAGCTGAACTGAGCAAAGACGGCTTAATGGTCTACGAGAAGCTTGTGATGAAGAGGACGACGCCGACGCATAACAACAAGATGCTACGTCGTTCAGCTTGGGCCAATAACATAACGACTGGAGACGATGAGCTTTGGCTTCAATAG

Coding sequence (CDS)

ATGGAGACAAAGCGACTCCGGTCTGGGCGTGCAAAGTGGATAGGCTCGGCCCGAGAACGAAACGGAGAAGCTACAGCTGAACTGAGCAAAGACGGCTTAATGGTCTACGAGAAGCTTGTGATGAAGAGGACGACGCCGACGCATAACAACAAGATGCTACGTCGTTCAGCTTGGGCCAATAACATAACGACTGGAGACGATGAGCTTTGGCTTCAATAG

Protein sequence

METKRLRSGRAKWIGSARERNGEATAELSKDGLMVYEKLVMKRTTPTHNNKMLRRSAWANNITTGDDELWLQ*
Homology
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BLAST of Chy8G151480 vs. NCBI nr
Match: KAA0042154.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK26728.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 9.11e-06
Identity = 24/33 (72.73%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 39  LVMKRTTPTHNNKMLRRSAWANNITTGDDELWL 71
           L  KRTT T NNKML  SAW  NITTGDDEL L
Sbjct: 207 LATKRTTSTRNNKMLHHSAWVKNITTGDDELQL 239

The following BLAST results are available for this feature:
BLAST of Chy8G151480 vs.
Match NameE-valueIdentityDescription
BLAST of Chy8G151480 vs.
Match NameE-valueIdentityDescription
BLAST of Chy8G151480 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042154.19.11e-0672.73NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK26728.1 NBS-LRR t... [more]
BLAST of Chy8G151480 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G151480.1Chy8G151480.1mRNA