Chy8G151130 (gene) Cucumber (hystrix) v1

Overview
NameChy8G151130
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMethyltransferase-related protein
LocationchrH08: 12313229 .. 12314372 (-)
RNA-Seq ExpressionChy8G151130
SyntenyChy8G151130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCCTCTCAGATTCATCCTCCTTTTCCTCTCTGCAATTCTCGCCGGATACTTCACCTGGAGATCCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCGATATCTTTCAAGCGACTGAAGCTTCCCATAAATCGGCGCCAGAAAACGAGAATCGGAGCGTGACGGAGGACGGACTTGGAGTGAACCGGATGGTTGAGAAGGGATTCTGGACGTTCGTGGACATGGCGAGCGGGAGATTCTTGTGGAGAAATTTTAACGATTCGATTCTCAACAAGAACAAGCAGGTTAAGGAAGATTGAGAGTAATTACATTATGTTCATTCTTTTAATTTGATTGTGTTGTTGGATTTGGAAATATCGCTGTTTCTTGATCCGATGGGAGATTGAAATGTTCATACAACGATGTTCATCTCATAGAGAAACATAAAAGAAGATTTTAATGAAATGTAAATGTTTGATGTTTAACGATATTATATATAGCTATAATTTTCTTTTTTGAATAACCAATTTATTGTTCATTTAAGAAAGTTAATGCAAAGTATATACTTACCATAGCCTACAACAATCATAACATCCATTATCATCTAGAGGATCTTTTTTAGTACCAATACGAGTGGTGGTAGAAACCACAAAACCTATCCTTGAATCCTTGATCACCTTATCTTTTGGAAGAAAGTCCTAACGTTCCATCATCTCTTAAATTAAACTTTTATAAAGAAAAATGTTTTCTTTAACTCAGAAAAAAATGTTTAAAAATGTTAACGTGTCTTAACTCAAAAGTTATTTACCTTAATTATTGTAAATAATAATAAATAGAGAAAAACAAACTTAAACAATATAATATATTTATTGGACGAAAATTATGATATATTTAATGGACAAAAATCAATTATTGACTTTAATCACTTCTTAACGAAATTGTTATTTGTTTTTCAAAAGCTTGTTAATTATTGATTGTTGACTTAATTTTTTTTTAATACAATCTTTTGGGTGAAGAATTCAAACCCTCGGCATGTCCTATGCCATGTTTACTATTGACTTTTTTTTTTTTTTTTTAATTCTTTAAGACTATATGCGTTATAAATTTTTCATCAAGATAGTCATTTTATGAACACTATATAATATGTTGTAGGAATAA

mRNA sequence

ATGTGTCCTCTCAGATTCATCCTCCTTTTCCTCTCTGCAATTCTCGCCGGATACTTCACCTGGAGATCCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCGATATCTTTCAAGCGACTGAAGCTTCCCATAAATCGGCGCCAGAAAACGAGAATCGGAGCGTGACGGAGGACGGACTTGGAGTGAACCGGATGGTTGAGAAGGGATTCTGGACGTTCGTGGACATGGCGAGCGGGAGATTCTTGTGGAGAAATTTTAACGATTCGATTCTCAACAAGAACAAGCAGGAATAA

Coding sequence (CDS)

ATGTGTCCTCTCAGATTCATCCTCCTTTTCCTCTCTGCAATTCTCGCCGGATACTTCACCTGGAGATCCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCGATATCTTTCAAGCGACTGAAGCTTCCCATAAATCGGCGCCAGAAAACGAGAATCGGAGCGTGACGGAGGACGGACTTGGAGTGAACCGGATGGTTGAGAAGGGATTCTGGACGTTCGTGGACATGGCGAGCGGGAGATTCTTGTGGAGAAATTTTAACGATTCGATTCTCAACAAGAACAAGCAGGAATAA

Protein sequence

MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDGLGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNKQE*
Homology
BLAST of Chy8G151130 vs. ExPASy TrEMBL
Match: A0A0A0KWN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192100 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.4e-36
Identity = 87/97 (89.69%), Postives = 87/97 (89.69%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLRFILLFLSAILAGYF WRSA    SSSSSSSDIFQATEAS KSAPENENRS TED 
Sbjct: 1  MCPLRFILLFLSAILAGYFAWRSA----SSSSSSSDIFQATEASDKSAPENENRSGTEDR 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNKQ 98
          LGVNRMVEKGFWTFVDMASGRFLWRN N SILNKNKQ
Sbjct: 61 LGVNRMVEKGFWTFVDMASGRFLWRNLNGSILNKNKQ 93

BLAST of Chy8G151130 vs. ExPASy TrEMBL
Match: A0A5A7V0V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00360 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0

Query: 1   MCPLRFILLFLSAILAGYFTWRSA-----SSSSSSSSSSSDIFQATEASHKSAPENENRS 60
           MCPLRFIL+FLSAILAGYF WRSA     SSSSSSSSSSSDIFQATEA  KSAP+NENRS
Sbjct: 1   MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSSSSDIFQATEAPDKSAPQNENRS 60

Query: 61  VTEDGLGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNKQ 98
           V EDG GV RMVE GFWTFVDMASGRFLWRN N+SILNKNKQ
Sbjct: 61  VREDGFGVKRMVENGFWTFVDMASGRFLWRNMNESILNKNKQ 102

BLAST of Chy8G151130 vs. ExPASy TrEMBL
Match: A0A1S3B5E4 (uncharacterized protein LOC103485982 OS=Cucumis melo OX=3656 GN=LOC103485982 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0

Query: 1   MCPLRFILLFLSAILAGYFTWRSA-----SSSSSSSSSSSDIFQATEASHKSAPENENRS 60
           MCPLRFIL+FLSAILAGYF WRSA     SSSSSSSSSSSDIFQATEA  KSAP+NENRS
Sbjct: 1   MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSSSSDIFQATEAPDKSAPQNENRS 60

Query: 61  VTEDGLGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNKQ 98
           V EDG GV RMVE GFWTFVDMASGRFLWRN N+SILNKNKQ
Sbjct: 61  VREDGFGVKRMVENGFWTFVDMASGRFLWRNMNESILNKNKQ 102

BLAST of Chy8G151130 vs. ExPASy TrEMBL
Match: A0A6J1DRJ4 (uncharacterized protein LOC111023174 OS=Momordica charantia OX=3673 GN=LOC111023174 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.4e-15
Identity = 53/90 (58.89%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLRFIL+FLSA+LAGY  WRSASSSS SSS          AS KS P +E R      
Sbjct: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSD--------VASEKSPPSDEKR------ 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFNDS 91
           GV   ++ GFW FVDMASGR+LWRN N S
Sbjct: 61 -GVGTTIQNGFWIFVDMASGRYLWRNLNGS 75

BLAST of Chy8G151130 vs. ExPASy TrEMBL
Match: A0A498HXD2 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019004 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.4e-12
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTE-D 60
          MCPLRFILLF SAILAGYF WR+      SS S +DI  +++    +  EN   S  E +
Sbjct: 1  MCPLRFILLFFSAILAGYFAWRTV----HSSPSGTDIITSSQLDSTNINENMGSSKHEQE 60

Query: 61 GLGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNK 97
                M++ GFW FVDMASG++LWRNF +  +N+ K
Sbjct: 61 AFNFKFMIQNGFWVFVDMASGKYLWRNFKE--MNEGK 91

BLAST of Chy8G151130 vs. NCBI nr
Match: XP_008441985.1 (PREDICTED: uncharacterized protein LOC103485982 [Cucumis melo] >KAA0060106.1 uncharacterized protein E6C27_scaffold39G00250 [Cucumis melo var. makuwa] >TYK08421.1 uncharacterized protein E5676_scaffold654G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (404), Expect = 1.14e-48
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0

Query: 1   MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSS-----DIFQATEASHKSAPENENRS 60
           MCPLRFIL+FLSAILAGYF WRSASSSSSSSSSSS     DIFQATEA  KSAP+NENRS
Sbjct: 1   MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSSSSDIFQATEAPDKSAPQNENRS 60

Query: 61  VTEDGLGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNKQ 97
           V EDG GV RMVE GFWTFVDMASGRFLWRN N+SILNKNKQ
Sbjct: 61  VREDGFGVKRMVENGFWTFVDMASGRFLWRNMNESILNKNKQ 102

BLAST of Chy8G151130 vs. NCBI nr
Match: XP_038882347.1 (uncharacterized protein LOC120073608 [Benincasa hispida])

HSP 1 Score: 150 bits (379), Expect = 7.64e-45
Identity = 81/99 (81.82%), Postives = 85/99 (85.86%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSS--DIFQATEASHKSAPENENRSVTE 60
          MCPLRFIL+FLSAILAGYF WRSASSSSSSSSSSS  DIFQATE S KS  E ENRSVTE
Sbjct: 1  MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSDIFQATEDSDKSPAETENRSVTE 60

Query: 61 DGLGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKNKQ 97
          DG G+ R ++ GFWTFVDMASGRFLWRN N SILNKNKQ
Sbjct: 61 DGFGLKRTIQNGFWTFVDMASGRFLWRNLNASILNKNKQ 99

BLAST of Chy8G151130 vs. NCBI nr
Match: KAE8649374.1 (hypothetical protein Csa_021566 [Cucumis sativus])

HSP 1 Score: 146 bits (368), Expect = 1.44e-42
Identity = 79/88 (89.77%), Postives = 79/88 (89.77%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLRFILLFLSAILAGYF WRSASSSSSSS    DIFQATEAS KSAPENENRS TED 
Sbjct: 1  MCPLRFILLFLSAILAGYFAWRSASSSSSSS----DIFQATEASDKSAPENENRSGTEDR 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFN 88
          LGVNRMVEKGFWTFVDMASGRFLWRN N
Sbjct: 61 LGVNRMVEKGFWTFVDMASGRFLWRNLN 84

BLAST of Chy8G151130 vs. NCBI nr
Match: KAG6595503.1 (hypothetical protein SDJN03_12056, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027489.1 hypothetical protein SDJN02_11502, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124 bits (311), Expect = 1.60e-34
Identity = 68/95 (71.58%), Postives = 78/95 (82.11%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLRFIL+FLSAILAGY  WRSASSSSSSSSSS D+F A E S KS  E+ENR V EDG
Sbjct: 1  MCPLRFILVFLSAILAGYVAWRSASSSSSSSSSS-DLFPAVE-SEKSPLESENRRVEEDG 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFNDSILNKN 95
           G+ +M++KGFW FVDMASGRFLWRN + S L+K+
Sbjct: 61 FGLKKMIQKGFWIFVDMASGRFLWRNLHSSALDKD 93

BLAST of Chy8G151130 vs. NCBI nr
Match: XP_022156242.1 (uncharacterized protein LOC111023174 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 2.36e-21
Identity = 54/90 (60.00%), Postives = 61/90 (67.78%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLRFIL+FLSA+LAGY  WRSASSSS SSS   D+     AS KS P +E R      
Sbjct: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSS---DV-----ASEKSPPSDEKR------ 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFNDS 90
           GV   ++ GFW FVDMASGR+LWRN N S
Sbjct: 61 -GVGTTIQNGFWIFVDMASGRYLWRNLNGS 75

BLAST of Chy8G151130 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLRF+L+F SA+LAGY  WR+   +S+    S ++ QA EA  K             G
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTV--NSTPELFSDELLQA-EAKEK------------QG 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFND 90
          L   R ++ G WTFVDMASGR+LWRN  +
Sbjct: 61 LDFKRKMDNGLWTFVDMASGRYLWRNLKE 74

BLAST of Chy8G151130 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCP+RF+L+F SA+LAGYF W++ SSS    S                P+  N    +  
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPEFDS----------------PDELNE---KQE 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRNFND 90
          L + + +E GFW FVDMASGR+LWRN  +
Sbjct: 61 LNLKKKMENGFWVFVDMASGRYLWRNLKE 70

BLAST of Chy8G151130 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 54.7 bits (130), Expect = 5.0e-08
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 1  MCPLRFILLFLSAILAGYFTWRSASSSSSSSSSSSDIFQATEASHKSAPENENRSVTEDG 60
          MCPLR IL+FLSA LAG+F  +  +S+S      S     T+A H  A ++     ++ G
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDS----FTDAEH--ADDDSVSGFSKVG 60

Query: 61 LGVNRMVEKGFWTFVDMASGRFLWRN 87
          +     ++ GFWT VDMASGR+LW N
Sbjct: 61 MA----MKSGFWTCVDMASGRYLWNN 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWN34.4e-3689.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192100 PE=4 SV=1[more]
A0A5A7V0V11.3e-3584.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B5E41.3e-3584.31uncharacterized protein LOC103485982 OS=Cucumis melo OX=3656 GN=LOC103485982 PE=... [more]
A0A6J1DRJ49.4e-1558.89uncharacterized protein LOC111023174 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A498HXD23.4e-1248.45Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019004 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008441985.11.14e-4884.31PREDICTED: uncharacterized protein LOC103485982 [Cucumis melo] >KAA0060106.1 unc... [more]
XP_038882347.17.64e-4581.82uncharacterized protein LOC120073608 [Benincasa hispida][more]
KAE8649374.11.44e-4289.77hypothetical protein Csa_021566 [Cucumis sativus][more]
KAG6595503.11.60e-3471.58hypothetical protein SDJN03_12056, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022156242.12.36e-2160.00uncharacterized protein LOC111023174 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT5G14602.11.1e-1246.07FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G18150.11.5e-1242.70Methyltransferase-related protein [more]
AT5G58375.15.0e-0843.02Methyltransferase-related protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..59
NoneNo IPR availablePANTHERPTHR34132EMB|CAB87627.1-RELATEDcoord: 1..91
NoneNo IPR availablePANTHERPTHR34132:SF2EMB|CAB87627.1-RELATEDcoord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G151130.1Chy8G151130.1mRNA