Chy8G150570 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G150570
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	chrH08: 11133396 .. 11135041 (-)
RNA-Seq Expression	Chy8G150570
Synteny	Chy8G150570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGCAAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGACGCAACGTGCTATTGGGTTTGTTTTGATGGAACCTCTTAAAGGAGAACTTAGGACATTGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGTGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAGCTATCTGCTCGGACAGAAGGAAGAAACCAGGAAAAAGGGGAAAAGGTTGATTCGAGATACAAGAAGAACTACAAGTTGTGAATTAGAAAATACTAGAAGTTCATCTGATTCATGGAAGTTGTCTTTGCCAACAAGTTGGCATCATGCAGCTTTCCACATTGCAAGACTTGGCAGGAATCTTTCTAACAGCATGGTCCTCACAAACATTTTTGTTAGTTATAAATATAATAGTTCAGGAAGCGAAAGAAACATATATTAATGGTTTGAGCTATATCTTATTGAGCCATATCAGATGGTAGGGAAAATTTTGTAGTTCCACCCCTATTCATTTATATATGTTAAATTACATTTGAGAATTTGCTTTGAGAATTTGTTAAATTACAAGTTTAGTCTTTATTCTTCTATGTCCAAATTAACTACATCACTGATTTTTTTTGTGAAAGGATATCATTGCCTATTAGTTCATTAACATTAACCAGATAAATTTCCCTGATAAATCCAGACTTTTCGCAGGACACACAAACACTTCAACTTGAAATTAAAAAAAAAAAGTTTAATTTGAGCCTTTTACAATTCTTATTGCTGAACCTGTTGCTGTGTTTGAAACTTCACCTGGTCCTAAAAACCTGTATGAAAGATAAATAGAAACCACACACTGCCGCTTATTTCTTCCCCACGGGTGCATATAACAATGTTAAATTTACATGCTTATGTACTTTAAGAGTATTAGATGTCAATAGATGCATATATATATTTAAAAATTCACATCTTCAACTTGTTTGTGTCCTACTTTTCTGTTGAAGTTTGTGTTTGTGGTCCTCGTTGTCTTTGTGCATGTGTCTGTCTGTATTCAAGTCCACATTGGTTTAGTATGGGTGCAGTTTGACGTAATTCTGTGTGTAGTATGGTTCAATTGATTTGGGAACATATTAGTTCATTGCAGTTAGAAGATGGCAGCAAAATACATAGTAGGTTCTTTACTTGGAGCAAGTGCAGTTGCATATATATGTGACCATCTAATTTCTGACAAGAAAATATTTGGAGGTAACTATCGGTCTGGTCTCACAGTTTCTTTGATCTGCTACGTTGCTTGGCTTTGCCATTTCTTTGATGTACCTCCATTTCTCTAATTTCTTAATCTCTCTTTCTTTTTAATGGATTTCTTTCTTGTTCAGGAACAACTCCAAGTACTGTTTCAAACAGCGAGTGGTTGGAAGAAACTGACAAAAAATTCCAAGCATGGCCTCGTACAGCCGGTCCACCTGTAGTCATGAACCCCATCAGTCGCCAAAATTTCATCGTCAAAACCCGCCCTGAATCTTAA

mRNA sequence

ATGGAAGAGGCAAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGACGCAACGTGCTATTGGGTTTGTTTTGATGGAACCTCTTAAAGGAGAACTTAGGACATTGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGTGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAGCTATCTGCTCGGACAGAAGGAAGAAACCAGGAAAAAGGGGAAAAGGAACAACTCCAAGTACTGTTTCAAACAGCGAGTGGTTGGAAGAAACTGACAAAAAATTCCAAGCATGGCCTCGTACAGCCGGTCCACCTGTAGTCATGAACCCCATCAGTCGCCAAAATTTCATCGTCAAAACCCGCCCTGAATCTTAA

Coding sequence (CDS)

ATGGAAGAGGCAAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGACGCAACGTGCTATTGGGTTTGTTTTGATGGAACCTCTTAAAGGAGAACTTAGGACATTGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGTGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAGCTATCTGCTCGGACAGAAGGAAGAAACCAGGAAAAAGGGGAAAAGGAACAACTCCAAGTACTGTTTCAAACAGCGAGTGGTTGGAAGAAACTGACAAAAAATTCCAAGCATGGCCTCGTACAGCCGGTCCACCTGTAGTCATGAACCCCATCAGTCGCCAAAATTTCATCGTCAAAACCCGCCCTGAATCTTAA

Protein sequence

MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRAIGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKRGKGTTPSTVSNSEWLEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPES*

Homology

[Close]

BLAST of Chy8G150570 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.0e-53
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKT RA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSA-LNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGK 120
           IGFVLME LKGELRT DVSDLSQSA LN CNLLDSN+EKILSIDEIMA+ICSDRRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RGKGTTPSTVS 131
           RGK    +T++
Sbjct: 180 RGKKLLTTTLT 190

[Close]

BLAST of Chy8G150570 vs. ExPASy TrEMBL
Match: A0A0A0KW48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.4e-52
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK QRA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKR 120
           IGFVLME LKGELRT DVSDLSQSALN CNLLDSNLEKILSIDEIMA+ICSDRRKKPGKR
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 299

Query: 121 GKGTTPSTVSNSEWL 136
            +    S    ++ L
Sbjct: 300 PQEKVDSRYKKNDKL 314

[Close]

BLAST of Chy8G150570 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKT RA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSA-LNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGK 120
           IGFVLME LKGELRT DVSDLSQSA LN CNLLDSN+EKILSIDEIMA+ICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

[Close]

BLAST of Chy8G150570 vs. ExPASy TrEMBL
Match: A0A0A0LBP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.9e-50
Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+T RA
Sbjct: 59  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 118

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKR 120
           IGFVLME LKG+LRT DVSDLSQS  N CNLLDSNLEKILSIDEIMA+ICSDRRKKPGKR
Sbjct: 119 IGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 178

Query: 121 GK 123
            +
Sbjct: 179 SR 180

[Close]

BLAST of Chy8G150570 vs. ExPASy TrEMBL
Match: A0A1S3CBX7 (uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.2e-50
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKT R 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKR 120
           IGFVLME LKGELRT DV+DLSQSALN CNLLDSNLEK L IDEIM +IC DRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSALNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGKR 120

[Close]

BLAST of Chy8G150570 vs. NCBI nr
Match: KAA0055731.1 (hypothetical protein E6C27_scaffold181G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 217 bits (552), Expect = 1.10e-68
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKT RA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSA-LNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGK 120
           IGFVLME LKGELRT DVSDLSQSA LN CNLLDSN+EKILSIDEIMA+ICSDRRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RGKGTTPSTVS 130
           RGK    +T++
Sbjct: 180 RGKKLLTTTLT 190

[Close]

BLAST of Chy8G150570 vs. NCBI nr
Match: XP_011653427.1 (uncharacterized protein LOC105435221 [Cucumis sativus])

HSP 1 Score: 213 bits (543), Expect = 3.69e-68
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK QRA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKR 120
           IGFVLME LKGELRT DVSDLSQSALN CNLLDSNLEKILSIDEIMA+ICSDRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120

Query: 121 GKGTTPSTVSNSEWL 135
            +    S    ++ L
Sbjct: 121 PQEKVDSRYKKNDKL 135

[Close]

BLAST of Chy8G150570 vs. NCBI nr
Match: XP_011651663.2 (uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651665.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651666.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651667.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738444.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738445.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738446.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738447.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738449.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738450.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738451.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738452.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738453.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738454.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738455.1 uncharacterized protein LOC101210446 [Cucumis sativus] >KAE8650857.1 hypothetical protein Csa_002034 [Cucumis sativus])

HSP 1 Score: 212 bits (540), Expect = 1.06e-67
Identity = 111/122 (90.98%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+T RA
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 60

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKR 120
           IGFVLME LKG+LRT DVSDLSQS  N CNLLDSNLEKILSIDEIMA+ICSDRRKKPGKR
Sbjct: 61  IGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120

Query: 121 GK 122
            +
Sbjct: 121 SR 122

[Close]

BLAST of Chy8G150570 vs. NCBI nr
Match: XP_008450999.1 (PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo])

HSP 1 Score: 211 bits (538), Expect = 1.54e-67
Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKT RA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSA-LNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGK 120
           IGFVLME LKGELRT DVSDLSQSA LN CNLLDSN+EKILSIDEIMA+ICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

[Close]

BLAST of Chy8G150570 vs. NCBI nr
Match: KGN53863.2 (hypothetical protein Csa_019174 [Cucumis sativus])

HSP 1 Score: 213 bits (543), Expect = 2.76e-66
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK QRA
Sbjct: 135 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 194

Query: 61  IGFVLMEPLKGELRTLDVSDLSQSALNVCNLLDSNLEKILSIDEIMAAICSDRRKKPGKR 120
           IGFVLME LKGELRT DVSDLSQSALN CNLLDSNLEKILSIDEIMA+ICSDRRKKPGKR
Sbjct: 195 IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 254

Query: 121 GKGTTPSTVSNSEWL 135
            +    S    ++ L
Sbjct: 255 PQEKVDSRYKKNDKL 269

[Close]

BLAST of Chy8G150570 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 60/124 (48.39%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK  R+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEPLKGELR---TLDVSDLSQ-SALNVCNLLDSNLEKILSIDEIMAAICSDRRKK 120
           +G VLME  +  ++   +L  S + Q   L+ CNLL ++++  + I+EI+  IC ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

[Close]

BLAST of Chy8G150570 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 60/124 (48.39%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK  R+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEPLKGELR---TLDVSDLSQ-SALNVCNLLDSNLEKILSIDEIMAAICSDRRKK 120
           +G VLME  +  ++   +L  S + Q   L+ CNLL ++++  + I+EI+  IC ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

[Close]

BLAST of Chy8G150570 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 60/124 (48.39%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTQRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK  R+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEPLKGELR---TLDVSDLSQ-SALNVCNLLDSNLEKILSIDEIMAAICSDRRKK 120
           +G VLME  +  ++   +L  S + Q   L+ CNLL ++++  + I+EI+  IC ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

[Close]

BLAST of Chy8G150570 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23
Identity = 61/127 (48.03%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLKTQR 60
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLK  R
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEPLKGELRTLDVSDLSQSA------LNVCNLLDSNLEKILSIDEIMAAICSDR 120
           ++G VLME ++   R  D + L+ S       L+ CNLL ++++  + I+EI+  IC+ +
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKK 120

[Close]

BLAST of Chy8G150570 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23
Identity = 61/127 (48.03%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLKTQR 60
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLK  R
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEPLKGELRTLDVSDLSQSA------LNVCNLLDSNLEKILSIDEIMAAICSDR 120
           ++G VLME ++   R  D + L+ S       L+ CNLL ++++  + I+EI+  IC+ +
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKK 120

The following BLAST results are available for this feature:

BLAST of Chy8G150570 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G150570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQA1	4.0e-53	88.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KW48	4.4e-52	84.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1	[more]
A0A1S3BQH9	1.3e-51	93.39	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A0A0LBP9	1.9e-50	89.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1	[more]
A0A1S3CBX7	3.2e-50	90.83	uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=...	[more]

BLAST of Chy8G150570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055731.1	1.10e-68	88.55	hypothetical protein E6C27_scaffold181G001160 [Cucumis melo var. makuwa]	[more]
XP_011653427.1	3.69e-68	84.44	uncharacterized protein LOC105435221 [Cucumis sativus]	[more]
XP_011651663.2	1.06e-67	90.98	uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651665.2 uncharact...	[more]
XP_008450999.1	1.54e-67	93.39	PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]	[more]
KGN53863.2	2.76e-66	84.44	hypothetical protein Csa_019174 [Cucumis sativus]	[more]

BLAST of Chy8G150570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	3.5e-25	48.39	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	3.5e-25	48.39	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	3.5e-25	48.39	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	2.5e-23	48.03	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	2.5e-23	48.03	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009515	Protein of unknown function DUF1138	PFAM	PF06592	DUF1138	coord: 122..166 e-value: 2.0E-26 score: 91.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..135
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G150570.1	Chy8G150570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity