Chy8G150480 (gene) Cucumber (hystrix) v1

Overview
NameChy8G150480
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionWGS project CBME000000000 data, contig CS3487_c000987
LocationchrH08: 10921882 .. 10922673 (+)
RNA-Seq ExpressionChy8G150480
SyntenyChy8G150480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTCAAAAGATTTCTAACCTCCTAATTGTTTGTGTTGTTTTTGGAATTGTCTTTAGCCATATAGGTGTAGTTGATGCAACCCGAGTGCTCTTAGGGTCTGGACCGAGTCCAAGCGGTCCAGGACACGGCACGAAACCTCCAGCTGATCCATATACGTTCAAAGCAAAGGAAAGCATCAAACCATGGCTTGAAAACTTAGATTCTAGACCGAGTCCTAAAGGCCCAGGACACGACATGAAACCCCCAACTGATCCATATTCGATCAAAGCAAAGGACAACGTCAAACCTTGGCTTGAAAACTTAGATTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCTTGAAACCCCCAGCTGATCTATATTCGATCAAAGGAAAGGAAAGTGTCAAACCTTGGTTTGAAAACTTAAGTTCTGGACCGAGTCCTAAGGGTCCAGGACACGGCATGAAACCCCCAGCTGATCCATATTCGATCAAAGCAAAGGAAAGCTTCAAACCTTGGCTTGAAAACTTAAGTTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCATGAAACCCCCAGCCGATCCATATTCAATCAAAGCAAAGGAAAGCGTCAAACCTTGGCTTGAAAACTTAGATTCTGGACCGAGTCCTAAGGGCCCAGGACATGGCTTGAAACCCCCAGCTGATCCATATTCGATCAAAGCAAAGGAAAGTGTCAAACCTTGGCTTGAAAACTTAGGGTCTGGACCGAGTCCTAAGGGTCCAGAACACGGCACGAAACCCCCAGCACACGTCGTCTAG

mRNA sequence

ATGAAGTTTCAAAAGATTTCTAACCTCCTAATTGTTTGTGTTGTTTTTGGAATTGTCTTTAGCCATATAGGTGTAGTTGATGCAACCCGAGTGCTCTTAGGGTCTGGACCGAGTCCAAGCGGTCCAGGACACGGCACGAAACCTCCAGCTGATCCATATACGTTCAAAGCAAAGGAAAGCATCAAACCATGGCTTGAAAACTTAGATTCTAGACCGAGTCCTAAAGGCCCAGGACACGACATGAAACCCCCAACTGATCCATATTCGATCAAAGCAAAGGACAACGTCAAACCTTGGCTTGAAAACTTAGATTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCTTGAAACCCCCAGCTGATCTATATTCGATCAAAGGAAAGGAAAGTGTCAAACCTTGGTTTGAAAACTTAAGTTCTGGACCGAGTCCTAAGGGTCCAGGACACGGCATGAAACCCCCAGCTGATCCATATTCGATCAAAGCAAAGGAAAGCTTCAAACCTTGGCTTGAAAACTTAAGTTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCATGAAACCCCCAGCCGATCCATATTCAATCAAAGCAAAGGAAAGCGTCAAACCTTGGCTTGAAAACTTAGATTCTGGACCGAGTCCTAAGGGCCCAGGACATGGCTTGAAACCCCCAGCTGATCCATATTCGATCAAAGCAAAGGAAAGTGTCAAACCTTGGCTTGAAAACTTAGGGTCTGGACCGAGTCCTAAGGGTCCAGAACACGGCACGAAACCCCCAGCACACGTCGTCTAG

Coding sequence (CDS)

ATGAAGTTTCAAAAGATTTCTAACCTCCTAATTGTTTGTGTTGTTTTTGGAATTGTCTTTAGCCATATAGGTGTAGTTGATGCAACCCGAGTGCTCTTAGGGTCTGGACCGAGTCCAAGCGGTCCAGGACACGGCACGAAACCTCCAGCTGATCCATATACGTTCAAAGCAAAGGAAAGCATCAAACCATGGCTTGAAAACTTAGATTCTAGACCGAGTCCTAAAGGCCCAGGACACGACATGAAACCCCCAACTGATCCATATTCGATCAAAGCAAAGGACAACGTCAAACCTTGGCTTGAAAACTTAGATTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCTTGAAACCCCCAGCTGATCTATATTCGATCAAAGGAAAGGAAAGTGTCAAACCTTGGTTTGAAAACTTAAGTTCTGGACCGAGTCCTAAGGGTCCAGGACACGGCATGAAACCCCCAGCTGATCCATATTCGATCAAAGCAAAGGAAAGCTTCAAACCTTGGCTTGAAAACTTAAGTTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCATGAAACCCCCAGCCGATCCATATTCAATCAAAGCAAAGGAAAGCGTCAAACCTTGGCTTGAAAACTTAGATTCTGGACCGAGTCCTAAGGGCCCAGGACATGGCTTGAAACCCCCAGCTGATCCATATTCGATCAAAGCAAAGGAAAGTGTCAAACCTTGGCTTGAAAACTTAGGGTCTGGACCGAGTCCTAAGGGTCCAGAACACGGCACGAAACCCCCAGCACACGTCGTCTAG

Protein sequence

MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTFKAKESIKPWLENLDSRPSPKGPGHDMKPPTDPYSIKAKDNVKPWLENLDSGPSPKGPGHGLKPPADLYSIKGKESVKPWFENLSSGPSPKGPGHGMKPPADPYSIKAKESFKPWLENLSSGPSPKGPGHGMKPPADPYSIKAKESVKPWLENLDSGPSPKGPGHGLKPPADPYSIKAKESVKPWLENLGSGPSPKGPEHGTKPPAHVV*
Homology
BLAST of Chy8G150480 vs. ExPASy TrEMBL
Match: A0A0A0L125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 101/120 (84.17%), Postives = 104/120 (86.67%), Query Frame = 0

Query: 1   MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTFKAKES 60
           MKFQ IS LLIVCVVFGIVFSH GVVDATRVLLGSGPSP GPGHGTKPPADPYTFKAKE 
Sbjct: 1   MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPADPYTFKAKER 60

Query: 61  IKPWLENLDSRPSPKGPGHDMKPPTDPYSIKAKDNVKPWLENLDSGPSPKGPGHGLKPPA 120
           +KPWLENL S PSP GPGH  KPP DPY+ KAK+ VKPWLENL SGPSP GPGHG KPPA
Sbjct: 61  VKPWLENLGSGPSPGGPGHGTKPPADPYTFKAKERVKPWLENLGSGPSPGGPGHGTKPPA 120

BLAST of Chy8G150480 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13
Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 0

Query: 1  MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTF---KA 60
          MKFQKI+ LLI+CVVFGIVFSHIG VDA R+L     S +          D Y+    KA
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60

Query: 61 KESIKPWLENLDSRPSPKGPGHDMKPP 85
          K+S+K WLENL+S PSPKGPGH  +PP
Sbjct: 61 KDSVKCWLENLESGPSPKGPGHGTRPP 82

BLAST of Chy8G150480 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.7e-13
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0

Query: 1  MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTF---KA 60
          MKFQKI+ LLI+C+VFGIVFSHIG VDA R+L     S +          D Y+    KA
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60

Query: 61 KESIKPWLENLDSRPSPKGPGHDMKPP 85
          K+S+K WLENL+S PSPKGPGH  +PP
Sbjct: 61 KDSVKCWLENLESGPSPKGPGHGTRPP 82

BLAST of Chy8G150480 vs. ExPASy TrEMBL
Match: A0A2P5DN38 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_047560 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.2e-13
Identity = 80/262 (30.53%), Postives = 94/262 (35.88%), Query Frame = 0

Query: 32  LLGSGPSPSGPGHGTKPPADPYTFKAKESIKPWLENLDSRPSPKGPGHDMKPPTDPYSIK 91
           L  SGPSP GPGH   PPA         +IK  +   +S PS  G GH+  PP       
Sbjct: 232 LADSGPSPGGPGHEFPPPA--------RTIK-GVHLANSGPSSGGLGHEFSPPI------ 291

Query: 92  AKDNVKPWLENLDSGPSPKGPGHGLKP----------------PADL-YSIKGKESVKPW 151
                    +  +SGPSP GP H  +P                P  L +S          
Sbjct: 292 ---RTSQGAQLANSGPSPIGPSHQFQPLARTLNGAHLVDSGPSPGSLDHSFPSSVRTSKG 351

Query: 152 FENLSSGPSPKGPGH-----------------GMKPPADPYSIKAKESFKPWLENLSSGP 211
               +S PSP GPGH                  + P    +      S     +   SGP
Sbjct: 352 VYLGNSSPSPSGPGHVFSRPKRTLKSAHLADSSLSPSEPDHEFPIVASTSKGAQLADSGP 411

Query: 212 SPKGPGHGMKPPADPYSIKAKESVKPWLENLDSGPSPKGPGHGLKPPADPYSIKAKESVK 260
           SP GPGH   PPA  +               DSGPSP GPGH   PPA         +  
Sbjct: 412 SPSGPGHEFPPPAKTFKN---------AHLADSGPSPGGPGHQFLPPA---------TTS 457

BLAST of Chy8G150480 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-11
Identity = 51/89 (57.30%), Postives = 57/89 (64.04%), Query Frame = 0

Query: 1  MKFQKISNLLIVCVVFGIVFSH--IGVVDATRVLLGSGPSPSGPGHGTKPPADPYTF--- 60
          MKFQKI+ LLIVCVVFGIVFSH  IG VDA R+L           H      DPY+    
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLF----ETLRDDHDV-DCVDPYSIDHH 60

Query: 61 KAKESIKPWLENLDSRPSPKGPGHDMKPP 85
          KAK+S+K WLENL S PS KGPGH  +PP
Sbjct: 61 KAKDSVKCWLENLGSGPSLKGPGHGTRPP 84

BLAST of Chy8G150480 vs. NCBI nr
Match: XP_031739745.1 (basic proline-rich protein-like [Cucumis sativus])

HSP 1 Score: 459 bits (1182), Expect = 1.98e-161
Identity = 212/259 (81.85%), Postives = 221/259 (85.33%), Query Frame = 0

Query: 1   MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTFKAKES 60
           MKFQ IS LLIVCVVFGIVFSH GVVDATRVLLGSGPSP GPGHGTKPP DPYTFKAKES
Sbjct: 1   MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTFKAKES 60

Query: 61  IKPWLENLDSRPSPKGPGHDMKPPTDPYSIKAKDNVKPWLENLDSGPSPKGPGHGLKPPA 120
           +KPWLENL S PSP GPGH  KPP DPY+ KAK++VKPWLENL SGPSP GPGHG KPP 
Sbjct: 61  VKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPPV 120

Query: 121 DLYSIKGKESVKPWFENLSSGPSPKGPGHGMKPPADPYSIKAKESFKPWLENLSSGPSPK 180
           D Y+ K KESVKPW ENL SGPSP GPGHG KPP DPY+ KAKES KPWLENL SGPSP 
Sbjct: 121 DPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPG 180

Query: 181 GPGHGMKPPADPYSIKAKESVKPWLENLDSGPSPKGPGHGLKPPADPYSIKAKESVKPWL 240
           GPGHG KPP DPY+ KAKESVKPWLENL SGPSP GPGHG KPP DPY+ KAKES+KPWL
Sbjct: 181 GPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESIKPWL 240

Query: 241 ENLGSGPSPKGPEHGTKPP 259
           ENLGSGPSP GP HGTKPP
Sbjct: 241 ENLGSGPSPGGPGHGTKPP 259

BLAST of Chy8G150480 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 4.23e-19
Identity = 58/123 (47.15%), Postives = 68/123 (55.28%), Query Frame = 0

Query: 1   MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTFKAKES 60
           MKFQKI+ LLI+CVVFGIVFSHIG VDA R+L                          E+
Sbjct: 1   MKFQKIAALLIICVVFGIVFSHIGTVDAARML-------------------------SET 60

Query: 61  IKPWLENLDSRPSPKGPGHDMKPPTDPYSI---KAKDNVKPWLENLDSGPSPKGPGHGLK 120
           ++                HD+    D YSI   KAKD+VK WLENL+SGPSPKGPGHG +
Sbjct: 61  LRD--------------DHDVDC-IDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTR 83

BLAST of Chy8G150480 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.17e-18
Identity = 57/123 (46.34%), Postives = 68/123 (55.28%), Query Frame = 0

Query: 1   MKFQKISNLLIVCVVFGIVFSHIGVVDATRVLLGSGPSPSGPGHGTKPPADPYTFKAKES 60
           MKFQKI+ LLI+C+VFGIVFSHIG VDA R+L                          E+
Sbjct: 1   MKFQKIAALLIICLVFGIVFSHIGTVDAARML-------------------------SET 60

Query: 61  IKPWLENLDSRPSPKGPGHDMKPPTDPYSI---KAKDNVKPWLENLDSGPSPKGPGHGLK 120
           ++                HD+    D YSI   KAKD+VK WLENL+SGPSPKGPGHG +
Sbjct: 61  LRD--------------DHDVDC-IDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTR 83

BLAST of Chy8G150480 vs. NCBI nr
Match: GEY46327.1 (hypothetical protein [Tanacetum cinerariifolium])

HSP 1 Score: 92.4 bits (228), Expect = 1.29e-18
Identity = 79/230 (34.35%), Postives = 92/230 (40.00%), Query Frame = 0

Query: 35  SGPSPSGPGHGTKPPADPYTFKAKESIKPWLENLDSRPSPKGPGHDMKPPTDPYSIKAKD 94
           SGPSP G GH   PP  P       +   WL    S PSP G GH +             
Sbjct: 35  SGPSPRGKGHDV-PPGVP-------NPPGWLAQKKSGPSPSGEGHRVP------------ 94

Query: 95  NVKPWLENLDSGPSPKGPGHGL-KPPADLYSIKGKESVKPWFENLSSGPSPKGPGHGMKP 154
           N   WL   +SGPSP G GH +  PP  L  +  K           SGPSP+G GH + P
Sbjct: 95  NPPGWLSQKESGPSPPGEGHKVPNPPGWLVDMPQK----------ISGPSPRGKGHDV-P 154

Query: 155 PADPYSIKAKESFKPWLENLSSGPSPKGPGHGMKPPADPYSIKAKESVKPWLENLDSGPS 214
           P  P           WL    SGPSP G GH +  P              WL   +SGPS
Sbjct: 155 PGVPNPPG-------WLAQKKSGPSPSGEGHRVPNPPG------------WLSQKESGPS 202

Query: 215 PKGPGHGLKPPADPYSIKAKESVKPWLENLG---SGPSPKGPEHGTKPPA 260
           P G GH +  P              WL ++    SGPSP+G  H   P A
Sbjct: 215 PPGEGHKVPNPPG------------WLVDMPQKISGPSPRGKGHDVPPGA 202

BLAST of Chy8G150480 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 5.07e-17
Identity = 59/127 (46.46%), Postives = 68/127 (53.54%), Query Frame = 0

Query: 1   MKFQKISNLLIVCVVFGIVFSHI--GVVDATRVLLGSGPSPSGPGHGTKPPADPYTFKAK 60
           MKFQKI+ LLIVCVVFGIVFSHI  G VDA R+L                          
Sbjct: 1   MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLF------------------------- 60

Query: 61  ESIKPWLENLDSRPSPKGPGHDMKPPTDPYSI---KAKDNVKPWLENLDSGPSPKGPGHG 120
           E+++                HD+    DPYSI   KAKD+VK WLENL SGPS KGPGHG
Sbjct: 61  ETLRD--------------DHDVDC-VDPYSIDHHKAKDSVKCWLENLGSGPSLKGPGHG 87

Query: 121 LKPPADL 122
            +PPA +
Sbjct: 121 TRPPAHV 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L1252.0e-5184.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1[more]
A0A5A7TL442.1e-1357.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BS334.7e-1356.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2P5DN386.2e-1330.53Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_047560 PE... [more]
A0A5A7TJV82.0e-1157.30Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
XP_031739745.11.98e-16181.85basic proline-rich protein-like [Cucumis sativus][more]
KAA0043548.14.23e-1947.15hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa][more]
TYK02483.11.17e-1846.34hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa][more]
GEY46327.11.29e-1834.35hypothetical protein [Tanacetum cinerariifolium][more]
KAA0043550.15.07e-1746.46hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..122
NoneNo IPR availablePANTHERPTHR37245:SF4PAMP-INDUCED SECRETED PEPTIDE 1coord: 223..254
coord: 187..219
NoneNo IPR availablePANTHERPTHR37245:SF4PAMP-INDUCED SECRETED PEPTIDE 1coord: 118..149
NoneNo IPR availablePANTHERPTHR37245:SF4PAMP-INDUCED SECRETED PEPTIDE 1coord: 1..79
coord: 152..184
NoneNo IPR availablePANTHERPTHR37245:SF4PAMP-INDUCED SECRETED PEPTIDE 1coord: 86..114
IPR040273PAMP-induced secreted peptide 1PANTHERPTHR37245PAMP-INDUCED SECRETED PEPTIDE 1coord: 86..114
IPR040273PAMP-induced secreted peptide 1PANTHERPTHR37245PAMP-INDUCED SECRETED PEPTIDE 1coord: 1..79
coord: 152..184
IPR040273PAMP-induced secreted peptide 1PANTHERPTHR37245PAMP-INDUCED SECRETED PEPTIDE 1coord: 118..149
IPR040273PAMP-induced secreted peptide 1PANTHERPTHR37245PAMP-INDUCED SECRETED PEPTIDE 1coord: 223..254
coord: 187..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G150480.1Chy8G150480.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response