Chy8G150010 (gene) Cucumber (hystrix) v1

Overview
NameChy8G150010
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSWIB domain-containing protein
LocationchrH08: 9489871 .. 9497713 (+)
RNA-Seq ExpressionChy8G150010
SyntenyChy8G150010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTCGACGACTGGGTTTCTTCATCGGCGTGCAGGTCGTCATTCGACATCGAAATATACACTCACCGGATAAGTTGAAGAAAATGACCGAAATAAGAAAGATTGATCGATGACAGATAAATCGGACGATCAAATTATTGGATGAAAGACGCCGGAAAGTAGATGGAATTCTTATTGAAGGAAATGACCGAAGTTACAGAACCTTTCTTAAATGTGCAATTAAGATAAAATCGTTACTTTTGTGAAAAATATTCAATATATTATTACCATATTTGACTCAAATATATACCATAATTAAATTGGAACAATAATAAATGATATACTATAAGTAAATGAAAATTATTTTATTTTTTATTTAATACATTAAATAGACAAGTTTTAGATACATAATAGATGTGATATAATATAATTATGGTATTATATTATTATATATTTATAAAAATAAATAATATATATAATTAATGTGGAGGATAAAATGGTCAATAAAAATATTGAAATCTTATATAAGAAAATTAGTGAGATTTTGAGACATTTGTATAAACGAATGTGTAAAATATGTGTTTTGTTTAAAATTTTCTAACATTTAATTTAACAAAAATAATTAACTTGATCCAACAGTCATGATATTTTCGCTATTAATTTGGCAAATCTATGTTTTCAATTTGGGACACATGTCAACTTTTTATTAGTCTCAAATTCAATCATGTGTATATTTTAGCTATTAATTTGGCAAATCTATGTTTTCAATTTGGGACACATGTCAACTTCTTATTAGTCTCAAATTCAATCATGTGTATATTTTCGCTATTAATTTAGTAAATGACGTGACAATTTGTTATTACAAAATTTCTTATTCAACAAACATATTTCTTTTCTTTTGTTTATATATTGAAATTTTACAACTCTTACCACTTTTTCTAAATAAAAAAAGTTACACACTTCATAATAATGATAGAATACTATTGTTAATATAATCTAAAATTTTTCTACAACTTGTAAATATTTTGATTTATTTTGTTATTTTTAAAAATGTCTCTTTTCTAAACAACAAATATACATAACCACGATAATTAAAATACTAAAACATATCTAATGGATAGTTTATTTTCTAGAGTGTATATAGCATGGTTTGATTCGATTTTAATTGATTTTTCAAGTAAAAAAAAGAGAAATTTTCAAAAATAGCAAATTTTACAAAATATTTAGAACTTATAGTAAATTCTGATGTTGGTAGTCATTAATATGTTAGAGTAATAGAAGTCTATCATTGATAGAATCCAAAATTTTGTTACAACTTATAAATATTTTAATTTATTTTGCTATTTTAAAAAATGTCAAAAAAAATTCATTTTAAACGTTTTCTCCCATCATTGGTTGGTTTTTTTTTTTTTTTACTAAGTGTTATTCAAACCCCGACCCTCACACTCCCCCAAGAAAAAACCACCTTCTCCTTTTCGTAACCCTTTGGCTTGTCTGCAACCAGCCACGCCACCGCTCGTCCCTTTCCGGCGCCGTCTCAAGGGGCTGCAGTCGGTAAGCGCCCTTTTCCCTATTCCTGTATCTCAATAAGTTCCGTTCTGTCAGCTCCATCCGGTCGCTGTCGTTTCAGATCAGGTCCGCCGCTGGAGTCTGCAGCGTGCAAATTGTGTTGCCGTCAGAAGCCGCTGCCGGTTGCCGAAATTTTGAATTTTGGGTAAGATTTAATGGTTTTGTTGGGATTTTTCTTCAATGGGTTTTGGATGCCTAATGAGTTCTGGCCTAATTTTACGTTGCTCACAGTGTTTGAGCCTTCAAACGTTATCTTTTGTGGATTTCGTTGGATTTTGGATTGAAGAATTGGAGTGGTTTTGAATCAAACCACTATTGGGTGAGTTGTGTTGGTGATTTTGGAATGATTGAATGTTGAGAATTTGACATAAAGGTTTAATTTAAATTTTGATTCCTGATTCAGTAATTTGATTCTAAGTAGTAGAATGCAGAGGAGGTTGGTTTGTTTGTGTATATTTGGACTTATTTGAGGAAATCTTACTCCTGAAACTGCCCTTGCGCCAGACGACATAGACAGTATGATATGGATTGACTTTTTCTAATAGATATAGAAAGGATTGATATGTACATAATTTAAGTTGTATGGTCATGATATTATTTGTATGTGGCTCGTTGTATTTATATGTATGGGACTCTGAATTATGTTGCAAGTTAGATATGTTAGTGATAATTGCCTTCCTACACATAGCTGCATCCCATTGAGGTTTGCGTTTTTCGGGTTCACTAGAGGTTGTTTTCCTCTGGTTTCACTAGAGGTTGTGTTCCTCTGGGTTCACTAGAGGTTTGTGTTTCTTTAGGTTCACTAAATACAGGTTTGTGTTTCCTTCAGGATTCACCAGATTTATGGATACATCTCACCTATGGTAGGCCAGGTTTATTTATTCACCGAGATAATCATCCATGATTCGTTGATGTATGCATGCCGCACTAGTATGATTGCATTCATTGGGCATAATGCATCACCTCATCCTTGTAGTGGAGTTACTTACGGAGTATTTTGAGCCTTGGGCTTCACAAAAGGTGCGCCTTATTTTATGAGCCTCACCTTTTGAAGGCAATACCCCATACCTATGCTTTGAGCCTAGGTGTGCGCCAGGGAGGGCTTTTTTAAACACTGTCCATATGCCTGATTTTTTTCTTCTAATTTTTTTTTTCTCTGAACTGGCTTCTTGATTTGAATTAGCTTGATTTCTTTTCTCTTGATTTCCCGAGAATTTTTGTATTCTGTTTAATTCTGTGACTGAAACTTTATTGCACATAATCCATTTGATAAAATTTCCAAGAATCGATGGTCAGGTCTTGTGCAGGGCTGTCTGTTTTTCATATTTTCAAAACTTCATTCATCAGCTGAGTAAACAATTTTTTATGTATGTTACCAGTGGAGGAACAAACTCGTTGTGCACAAAAATGGCAACAAAACGGATGAAGATGGCCATTACAGATAACCCAAAGAAGCTTGCAAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACATTCCCAAATTTCTCGTCTTGGCTGTTTCAAGTGTGTGTGGTCATATATTAAAACCAACAACCTTCAGGTTCTTTTTTTGTCTCTTTTTTTTTAATATTTTTTATGGATTTTTTTAATCAGTTTTAGATGCATATGATTATGCTGCTTTCAACCTGACAGTGACCTCTCTTGTTTAATTAACTTTTAAAATATTTAGTTTAGATTCTACATTTTATGGAGAAAAGGAAAAGAACAATCAAATAGGAGAAGAAGAATCATAAGTTTGAGGGCTCAGGAGGAAAGAAAAAATCTCCTGAAATGAAAGTTATGAGAAACTAATGGAGGGTCAAGGTCGAAGACAAAGTACACTTAATAAAAGTTAAAACTATCTTTAGAGGTTACAAAGAGAGTCTGATAGAAGTAGAACCCAAATAGCAGGAGAATGATACTGAAACGTGAAAGAGAATAGTTACAAGATAACTTTCAAGGGACTTGAAAGAGTCTGGAAGGTTGTCCCTGATGAGTCGAAAAGTCGAAAATCATCTGAGCAATTCTCTACTTTCATCCCTTAGCAGTCACCCTATTAATCCTCCCAACTATATACTCTAATAATATTTCTGTTGCATTCCTAATGAAGAAGAGATGCTATCAACCATAGGATCACAAAAGGAATGTGATCTTGATTTATTACCCAAGGGAAGTTTTAAGTAGGTCACAGGCAACATAGGAACTCACCACCTACACCATATGTCCCTGTCTCTCAAGCTTGACTGGCTTACTACAGATTAACTGTAAATGAGTAAGATGGATGATTTTTTCTCTAACCTATCCTTCTACTAAACCATTATCCATGCCTCTCAAATTAAGTCTGTTAAGCACATCCACAACCACCCCAAAAGAGAATGATACTTGATTTTACGTGTAAATTCAATAGCTTTTGGTTTCAACTCCAGTTTGCAGTATATTTTACCACTTTTCTGACTTTTCCAATGTCTTATGAAATGATCTTAGAAAATTTGAAGTACTTGAAACTTTAACGAAGGAGCATCTATATATATCATATATATACTTTCTTATATTAGTTAGTGTTATAAATATGTTTCTGCTAAATATGTTTCTGCTGTGTCATCACTGGATTTCTTTTTTCAAATAAAATGTTATAAATATGTATATTTGTTGTCTAGGATCCCACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATAATGCTGGGCAAGCCCAAGGTTGAACTAGCCGAACTTCCTGCACTGATTAAATTACATTTCCCCAAAAATTCCAAGTGAGCTATGATTATAGTTTAGCCTCTAGCAGCTCCGGAATGAGGTCTTCAAGTCACCAATAGTTAGGATGTTTAGCCTCAATTTTGTATAATTGTCCTACTAGGTTTTTTTACTATGTATTAAAAAAAAGCTTCAATGGTCATTGTAATTTTGGTTTTAATTCATTGTGGTTTTAACTTTGACTCATTTTAGTTTGTCCTAATTTTAAAATGTTCATTTGGTTATTAGACTTTCAATTTTTATTCATTTTGGTCCTTAAGCTTTTAAAAAGTGTCCATTTGTATTCGTTAGAAAGGAAATAAAAATGGAAAGGAAGAGACCAAAATGTTCGTTTTTTTAAAGTACAAGGATCAAGATTACTTAAATTAAAAAGTACGAGGACCAAAATAAACATTTTTAAATTTGAGGGACCAAAATGAACCAAATTTATTTTAGTTTGCAATCTCTTCTTTGCTCCCTCTCTATAAAATGAATCACATATATACACTTGTCTTAGGGGACATTTTTAAATATAGTAAAATGAACTAAAATATTCATAAAACATAGTAAAAGTTTAGTTTTTATTAGTTTCTATCAATTCCATAGTTTTTACTAATGTTTTTAATAGGTATTGATAGAGAGTATCAATGACTATCATTAGTAGAATTTGAAAATTTATTATATTTGTAAATATTATGAGAGTTCTGTCATTTACATTATTTTTTTCTTATCCTATTAAGAGTTATTTTTCCCACATACAAGTATCTTTATCTATAGTATATATAAAAGTCTCAATATGGATAAACTGTTTTTTTCTCCATTATACTCTTGGAATGCAAATGATTTTTTATTTACATTTTGGATATTAATTAAAAATTAAATATCTTATTAATTATAATTAACAATACAAATTTAAATACTTGAAAGTTGAAAAGTTTTTTTAACATTTTTTTCTAGTATATAAAAGGCTTATTTGATTTTTTTACAACATTTTTGTGTATATTCAAAACTTCTATATTTGGAAGTCTATTGGTTTAAAAAATGTCAACATTTGAATTCTATTGTTTGATTAGAGAGTTTAAATCTTTCAACAAATCATAGAGAATCAAGCAATGAGTGATCACTTAGGAAATGGCAATGGATATCTATTCAAGTTCAACAAAAAACAATTACTCATTTGTTTATGTATTGCAATGACAATTAACAAAGAATGACAAACAATTCCTAATGTTGGAATGTATCTTCCTAAAAATGCGTTTTCTCATTGACAACTTTATGTTGCACTATCTAGAGGAATTTCAATTAGGACAACAAAAGTTTGGATCAAGCACATAGGTGACAATAAGTTACCTTCAAATTGCGTACAAAAAAAATTGTTTTTTATAAAGAAATACTTTTTTGATAGATGAAGTCTTACATTTAAATTTTTAGATTTTAATCTATTTATTGTAGCTTCTTCCTATGTACATATAATTCTATTAAATTTTAAATTTTCAACTTTTAAATTTAGCACAACCTAAATATAGTAAATACAATGTTTACTATCATCTAAAGCTACACATTAAATGTGTCATGCACGCATCTTTTACTAGTTATATTAAAAGGGGTTATAGGGAGAATTTTTACGTGCTCATTTTATCCCTACACTTATCATAAATTCTCATATTACCCTTAGGTTACTTTGTATATTTGATGTTGATAGGATGTAACTCTATGAGATAGGATGCATCTATTCGAGGTGGAAATATGTTACATTAGTACGTTGACTTTTTTAATGTCGATGTGAGATGAAAATGTAAAAGAAAAACAAAATAAATACATATATTTATATTCTTAAAAAACAATTTAATTAATGAAATCCAAAATTTAGAGAAAACATTAAAAAAAACAAAAGATTTAATTGAACGAAAGTAACAAATGAAGCAATGAATCATTTTGAGTTTAAAACATTGTAATAAATTTTGTTACAAGTAAATAGTGGAATATTAACCTATTAATTTAATAATTTAATAATTTAATTACTAGAATACTTTTCATCTCTCTAAACTAGATAATAGAATATTTTTTTAGAAGATAGATATATGAAAGCATTGAAACAATTATTTTATTATTTAACTTCTAATTTAAAAGAAATTAGGAGTTCGTTTGGATTATTTATGAAAAAAATGTTTTTCAAAAATACATTTTCTTTTAAAAGATTTCTTTAAAATGATTTTAAAATTTAAATATTTATATATTTGATTAAATCTTTTTACAAGTACATACATAATTTTGTCAAAATTTTGTTTTTAGTGTTTGCTTTAAAATGAATTATTTTTCAATTTCATTTTTTAAAAATACATTTTGAAAAGTTATCAAACACCTCAATTTTCTTTTAAAATAGTTTTTTACAAATGTAAACACTTCAGAAGGTAATCCAAACATATCCTAAATGAAACTACAAATTTTCGTATAAAGAAAGAGGAAAAGAACAAGAGAAAATCATCCAAGAAAGAAGAGAAAAAACAAAAAACTGAAGTCTCCTATGAATGGGATGTGAGATATTGTTAAATAGTTTTTTTTATTAAAAATGAAAAAGAAAAAGAACAAAAAAGAGATAGTTTAGGGCATGAAAGTTCAATTGAGATGCTGGGAAAAAATAACAAAAAAAACTTTTTTTAAAAAAGAAAAAAAAAACCTTAAACGAAGAAAGAAAGAAATTGATTTGAGATGCTCTAACTAGAGCATAAAAAAATAAGAAAAAAATTTATATTAAAAAAAAAAAACTTAAAAGAGTATGTTGTATGGAGAGGTATTAAATTATATAATAACCAGTCGGATTATAATTATAATAAACTTAAAAATAATTCATGGTAAAAAAAATGAAAAACAATCTTTTTAGTCACCTATGGATGAGATTTATTAAATTATAATACTTAAAAATAATTCATTGTAAAAAAAAAGGAAAAACAATCTTTTTAGTCCCAAAATTTGATGATTATGTGTTTTTGGTCTATGAGTTTTAAAAATGGACTTTTTTTAGTTCAAGGTTTATACCCATAGACCAATTTGATCAGAGTTTTCATAATCTACCTTTTTAGTGTACGAGTTTTAAAAATGAGGTTTATAGAATTCTAAAAGTATTTATGTTTGATTTTTTAAAAAACAATTATATGATATTTAAAATTAAAAATATTTTTTAAAACTACCAAAAACATTATTACTGGCAGATTTCTCAACTTTAATAAAGAAAATTGATTAATGTTTAATATTTATAGGGATAATCAACAATATTTTTATAAGAAGTTTCCAAAACAACAATATTAAACCAAATTGGTGTTTTAAACGGTAAGATTTGCATCAAATTAGTATCGTTCTATAATTATAAAAAATCTGCTTCTCATTTGTCATTTCCCTCGCTTTTATCCATCCTTTCTGTATTCTTAAAGACGACCACGCTCTTCCGCTGTGACCTTCTTCATCATCCCCTCGATGAACCAAATCAACTTCACAAGCTACCCAAGGAGTTGA

mRNA sequence

ATGGTGGTCGACGACTGGGTTTCTTCATCGGCGTGCAGCCACGCCACCGCTCGTCCCTTTCCGGCGCCGTCTCAAGGGGCTGCAGTCGGTAAGCGCCCTTTTCCCTATTCCTGTATCTCAATAAGTTCCGTTCTGTCAGCTCCATCCGGTCGCTGTCGTTTCAGATCAGGTCCGCCGCTGGAGTCTGCAGCGTGCAAATTGTGTTGCCGTCAGAAGCCGCTGCCGGTTGCCGAAATTTTGAATTTTGGTGGAGGAACAAACTCGTTGTGCACAAAAATGGCAACAAAACGGATGAAGATGGCCATTACAGATAACCCAAAGAAGCTTGCAAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACATTCCCAAATTTCTCGTCTTGGCTGTTTCAAGTGTGTGTGGTCATATATTAAAACCAACAACCTTCAGGATCCCACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATAATGCTGGGCAAGCCCAAGGTTGAACTAGCCGAACTTCCTGCACTGATTAAATTACATTTCCCCAAAAATTCCAAACGACCACGCTCTTCCGCTGTGACCTTCTTCATCATCCCCTCGATGAACCAAATCAACTTCACAAGCTACCCAAGGAGTTGA

Coding sequence (CDS)

ATGGTGGTCGACGACTGGGTTTCTTCATCGGCGTGCAGCCACGCCACCGCTCGTCCCTTTCCGGCGCCGTCTCAAGGGGCTGCAGTCGGTAAGCGCCCTTTTCCCTATTCCTGTATCTCAATAAGTTCCGTTCTGTCAGCTCCATCCGGTCGCTGTCGTTTCAGATCAGGTCCGCCGCTGGAGTCTGCAGCGTGCAAATTGTGTTGCCGTCAGAAGCCGCTGCCGGTTGCCGAAATTTTGAATTTTGGTGGAGGAACAAACTCGTTGTGCACAAAAATGGCAACAAAACGGATGAAGATGGCCATTACAGATAACCCAAAGAAGCTTGCAAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACATTCCCAAATTTCTCGTCTTGGCTGTTTCAAGTGTGTGTGGTCATATATTAAAACCAACAACCTTCAGGATCCCACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATAATGCTGGGCAAGCCCAAGGTTGAACTAGCCGAACTTCCTGCACTGATTAAATTACATTTCCCCAAAAATTCCAAACGACCACGCTCTTCCGCTGTGACCTTCTTCATCATCCCCTCGATGAACCAAATCAACTTCACAAGCTACCCAAGGAGTTGA

Protein sequence

MVVDDWVSSSACSHATARPFPAPSQGAAVGKRPFPYSCISISSVLSAPSGRCRFRSGPPLESAACKLCCRQKPLPVAEILNFGGGTNSLCTKMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSKRPRSSAVTFFIIPSMNQINFTSYPRS*
Homology
[Close]
BLAST of Chy8G150010 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 116 VNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI 168
           + L   L EF+G  Q+SR    K +W YIK ++LQDP +K  ++CD+KLKS+
Sbjct: 121 MKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSV 172

[Close]
BLAST of Chy8G150010 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 26/77 (33.77%), Postives = 46/77 (59.74%), Query Frame = 0 

Query: 116 VNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIMLGKPKVE 175
           V L  +L   +G  +++R    + +W+YIK +NLQ+P NK  ++CDEKL+ ++LGK    
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLE-LILGK-STN 183

Query: 176 LAELPALIKLHFPKNSK 193
           + E+  ++  H  +  K
Sbjct: 184 MFEMHKILASHMTEPKK 198

[Close]
BLAST of Chy8G150010 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 27/90 (30.00%), Postives = 51/90 (56.67%), Query Frame = 0 

Query: 97  RMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKN 156
           + K    D+P   +  +  V L + L++F+G  ++ R    K +W YIK ++LQ+P ++ 
Sbjct: 105 KRKKKKNDSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRR 164

Query: 157 VVICDEKLKSIMLGKPKVELAELPALIKLH 187
            ++CDEK++ I  GK K+ +  +  L+  H
Sbjct: 165 EILCDEKMEPI-FGK-KMTMFSMNKLLTKH 192

[Close]
BLAST of Chy8G150010 vs. ExPASy TrEMBL
Match: A0A0A0L2E1 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G493210 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.3e-92
Identity = 171/192 (89.06%), Postives = 178/192 (92.71%), Query Frame = 0 

Query: 1   MVVDDWVSSSACSHATARPFPAPSQGAAVGKRPFPYSCISISSVLSAPSGRCRFRSGPPL 60
           M+++     +   HATARPFPAP QGAAVGKRPFPY  ISISSVLSAPSGRCRF+SGPPL
Sbjct: 1   MIINQMDIFNTTYHATARPFPAPFQGAAVGKRPFPYFFISISSVLSAPSGRCRFKSGPPL 60

Query: 61  ESAACKLCCRQKPLPVAEILNFGGGTNSLCTKMATKRMKMAITDNPKKLANLIDLVNLPS 120
            SAACKLCCRQK LPVAE+LNFGGGTN LCTKMATKRMKMAITDNPKKLANLIDLVNLPS
Sbjct: 61  VSAACKLCCRQKLLPVAEVLNFGGGTNLLCTKMATKRMKMAITDNPKKLANLIDLVNLPS 120

Query: 121 TLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIMLGKPKVELAELP 180
           TLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI+LGKPKVELAELP
Sbjct: 121 TLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELP 180

Query: 181 ALIKLHFPKNSK 193
           ALIKLHFPKNSK
Sbjct: 181 ALIKLHFPKNSK 192

[Close]
BLAST of Chy8G150010 vs. ExPASy TrEMBL
Match: A0A1S3BL41 (upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.3e-45
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  +RMKMA+TDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MTIRRMKMAMTDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 193
           TNKNVV+CDEKLKSI+LGKPKVELAELPALIKLHFPKN K
Sbjct: 61  TNKNVVVCDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Chy8G150010 vs. ExPASy TrEMBL
Match: A0A6J1HWJ0 (protein TRI1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43
Identity = 92/105 (87.62%), Postives = 95/105 (90.48%), Query Frame = 0 

Query: 88  SLCTKMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTN 147
           S   KM  +RMK AITDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFK VWSYIKTN
Sbjct: 51  SCAEKMLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTN 110

Query: 148 NLQDPTNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 193
           NLQDPTNKNVVICDEKL+SI+LGK KVELAELPALIKLHFPKN K
Sbjct: 111 NLQDPTNKNVVICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 155

[Close]
BLAST of Chy8G150010 vs. ExPASy TrEMBL
Match: A0A6J1ELR1 (upstream activation factor subunit UAF30 OS=Cucurbita moschata OX=3662 GN=LOC111435564 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.4e-42
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  +RMK AITDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFK VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 193
           TNKNVVICDEKLKSI+LGK K+ELAELPALIKLHFPKN K
Sbjct: 61  TNKNVVICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 100

[Close]
BLAST of Chy8G150010 vs. ExPASy TrEMBL
Match: A0A6J1HY33 (upstream activation factor subunit UAF30 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-42
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  +RMK AITDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFK VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 193
           TNKNVVICDEKL+SI+LGK KVELAELPALIKLHFPKN K
Sbjct: 61  TNKNVVICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Chy8G150010 vs. NCBI nr
Match: KGN55149.2 (hypothetical protein Csa_012337 [Cucumis sativus])

HSP 1 Score: 346 bits (888), Expect = 4.13e-119
Identity = 170/179 (94.97%), Postives = 173/179 (96.65%), Query Frame = 0 

Query: 14  HATARPFPAPSQGAAVGKRPFPYSCISISSVLSAPSGRCRFRSGPPLESAACKLCCRQKP 73
           HATARPFPAP QGAAVGKRPFPY  ISISSVLSAPSGRCRF+SGPPL SAACKLCCRQK 
Sbjct: 11  HATARPFPAPFQGAAVGKRPFPYFFISISSVLSAPSGRCRFKSGPPLVSAACKLCCRQKL 70

Query: 74  LPVAEILNFGGGTNSLCTKMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISR 133
           LPVAE+LNFGGGTN LCTKMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISR
Sbjct: 71  LPVAEVLNFGGGTNLLCTKMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISR 130

Query: 134 LGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 192
           LGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI+LGKPKVELAELPALIKLHFPKNSK
Sbjct: 131 LGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 189

[Close]
BLAST of Chy8G150010 vs. NCBI nr
Match: XP_031739586.1 (upstream activation factor subunit spp27 [Cucumis sativus] >XP_031739587.1 upstream activation factor subunit spp27 [Cucumis sativus] >XP_031739588.1 upstream activation factor subunit spp27 [Cucumis sativus])

HSP 1 Score: 204 bits (518), Expect = 4.40e-64
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 192
           TNKNVVICDEKLKSI+LGKPKVELAELPALIKLHFPKNSK
Sbjct: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 100

[Close]
BLAST of Chy8G150010 vs. NCBI nr
Match: XP_038882021.1 (upstream activation factor subunit spp27 [Benincasa hispida])

HSP 1 Score: 194 bits (494), Expect = 1.95e-60
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  KRMKMAITDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MLPKRMKMAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 192
           TNKNVVICDEKLKSI+LGKPKVELAELPALIKLHFPKN K
Sbjct: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Chy8G150010 vs. NCBI nr
Match: XP_008449303.1 (PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449304.1 PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449305.1 PREDICTED: upstream activation factor subunit spp27 [Cucumis melo])

HSP 1 Score: 192 bits (488), Expect = 1.59e-59
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  +RMKMA+TDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MTIRRMKMAMTDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 192
           TNKNVV+CDEKLKSI+LGKPKVELAELPALIKLHFPKN K
Sbjct: 61  TNKNVVVCDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Chy8G150010 vs. NCBI nr
Match: KAG6603170.1 (hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185 bits (469), Expect = 3.19e-56
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0 

Query: 92  KMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQD 151
           KM  +RMK AITDNPKKLANLIDLVNLPSTLREFVG SQISRLGCFK VWSYIKTNNLQD
Sbjct: 30  KMLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQD 89

Query: 152 PTNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSK 192
           PTNKNVVICDEKLKSI+LGK K+ELAELPALIKLHFPKN K
Sbjct: 90  PTNKNVVICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 130

[Close]
BLAST of Chy8G150010 vs. TAIR 10
Match: AT4G26810.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41
Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  +R+K AITDNPKKL NLIDLVNLPSTLR FVG SQISRLGCF  VWSYIKTNNLQDP
Sbjct: 1   MLPQRLKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSKR 194
            NKNVVICDEKLKSI+LGK +VEL +LP+LIKLHFPK  K+
Sbjct: 61  KNKNVVICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQKK 101

[Close]
BLAST of Chy8G150010 vs. TAIR 10
Match: AT4G26810.2 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41
Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 93  MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 152
           M  +R+K AITDNPKKL NLIDLVNLPSTLR FVG SQISRLGCF  VWSYIKTNNLQDP
Sbjct: 1   MLPQRLKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDP 60

Query: 153 TNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNSKR 194
            NKNVVICDEKLKSI+LGK +VEL +LP+LIKLHFPK  K+
Sbjct: 61  KNKNVVICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQKK 101

[Close]
BLAST of Chy8G150010 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 35/102 (34.31%), Postives = 56/102 (54.90%), Query Frame = 0 

Query: 90  CTKMATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNL 149
           C  +  K          ++   ++ +V +   L  F+G +++SR    K +W YIK NNL
Sbjct: 8   CRVLMAKAASSTGAKTGRQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNL 67

Query: 150 QDPTNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNS 192
           Q+P NK  ++CDE+LK+I  GK  V   E+  L+  HFPK++
Sbjct: 68  QNPVNKREILCDEQLKTIFSGKDTVGFLEISKLLSQHFPKSA 109

[Close]
BLAST of Chy8G150010 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-12
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0 

Query: 122 LREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIMLGKPKVELAELPA 181
           L  F G  +++R    K VW Y+K +NLQ+P NK  + CD+KLK+I  GK KV + E+  
Sbjct: 43  LASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMK 102

Query: 182 LIKLHFPKN 191
           L+  HFPK+
Sbjct: 103 LLSPHFPKS 111

[Close]
BLAST of Chy8G150010 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 35/104 (33.65%), Postives = 54/104 (51.92%), Query Frame = 0 

Query: 92  KMATKRMKMAITDNPKK----LANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTN 151
           K   K    A +D+P K       +  +  +   L +F+G  + SR    K +W+YIK++
Sbjct: 40  KAKAKPKPKAKSDSPAKKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSH 99

Query: 152 NLQDPTNKNVVICDEKLKSIMLGKPKVELAELPALIKLHFPKNS 192
           +LQ+P +K  + CDE LK I  GK KV   E+  L+  HF K +
Sbjct: 100 DLQNPADKREIFCDETLKLIFEGKDKVGFLEISKLLSPHFVKTA 143

The following BLAST results are available for this feature:
BLAST of Chy8G150010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O745033.1e-0746.15Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97... [more]
Q087471.5e-0633.77Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC... [more]
Q050241.3e-0530.00Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ... [more]
BLAST of Chy8G150010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2E13.3e-9289.06SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G493210 PE=4 S... [more]
A0A1S3BL412.3e-4592.00upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221... [more]
A0A6J1HWJ04.8e-4387.62protein TRI1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1[more]
A0A6J1ELR11.4e-4290.00upstream activation factor subunit UAF30 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1HY332.4e-4290.00upstream activation factor subunit UAF30 isoform X2 OS=Cucurbita maxima OX=3661 ... [more]
BLAST of Chy8G150010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55149.24.13e-11994.97hypothetical protein Csa_012337 [Cucumis sativus][more]
XP_031739586.14.40e-6499.00upstream activation factor subunit spp27 [Cucumis sativus] >XP_031739587.1 upstr... [more]
XP_038882021.11.95e-6095.00upstream activation factor subunit spp27 [Benincasa hispida][more]
XP_008449303.11.59e-5992.00PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449304... [more]
KAG6603170.13.19e-5690.10hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Chy8G150010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26810.11.2e-4180.20SWIB/MDM2 domain superfamily protein [more]
AT4G26810.21.2e-4180.20SWIB/MDM2 domain superfamily protein [more]
AT2G35605.11.6e-1434.31SWIB/MDM2 domain superfamily protein [more]
AT1G31760.12.5e-1244.93SWIB/MDM2 domain superfamily protein [more]
AT3G03590.16.2e-1133.65SWIB/MDM2 domain superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019835SWIB domainSMARTSM00151swib_2coord: 112..192
e-value: 3.2E-11
score: 53.3
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 116..187
e-value: 1.6E-21
score: 75.9
IPR003121SWIB/MDM2 domainPROSITEPS51925SWIB_MDM2coord: 111..189
score: 17.824167
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10SWIB/MDM2 domaincoord: 109..197
e-value: 1.2E-20
score: 75.2
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 105..191
NoneNo IPR availablePANTHERPTHR13844:SF45OS09G0133000 PROTEINcoord: 90..194
NoneNo IPR availablePANTHERPTHR13844SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY Dcoord: 90..194
NoneNo IPR availableCDDcd10567SWIB-MDM2_likecoord: 116..187
e-value: 6.67474E-24
score: 88.3693

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G150010.1Chy8G150010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus