Chy8G149710 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G149710
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
Location	chrH08: 8744512 .. 8747545 (-)
RNA-Seq Expression	Chy8G149710
Synteny	Chy8G149710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATCATGGCAAACCCAATGCCTGCTCACCACCAAAAATTTACTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGATTTCAATGGCGCCAGACTCCACGCCCAAGTTCAGGTCTATTTCTCGTTTCTTTTCTCCTATCTATCTTTCTGTTTTGGGTTTTGCTTTTATCTCTTAAATTTTGATTCAATCTGGATATTATTTGAGCGGTTCTTGTTGTTAAAGCCTAAAAATCAGTGGACATTGAACTGGGTTTCCCCTTAAGTGGCCATATTGCTATATGCGAGTTTCTTTTCCCTCCGTTTTGATTGATTCATATATGTTGTTTGCCACTAAACACAAAAGCTTAGAAGAAATAGGATACATCGACTATTAATTGGATTAAAAAAACTCATTCAACATGAAAGCTGTTAACATGAATTTGAGGGTGAGTGTGGTTTCGGAACATTCTGCGTTGATCCTATGTTAATCACGAAAGCTTTGAAATATAAGTTTAATTCATGAAGCCTGATTAGCATGTGAGCTGCTAAAATGAATAAGTGGGGAAATGAGGTTTCAAATACGAGTTTTTGTTTTTTAACCTGATACTGTGTTAAATTACATTACGTTGGGAAGTGTAGGCTGATTGATTATGGTGCATTTAGTGCTTTATATGTTTTCTCAATTTGGTTTGGCCTTGGATTGCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGGATTACATGTTACAGCAAGTGCCAAAAAGAACATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTTCTAGTCAAAGAGGGTCATCAGGTTTTGCCATTCTCTTTCTTCTTTCTTTGGTTGCTGCAGATTCCCCATTAGAAGATTCATGGACTTTGCTAATTTTGGCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATGCCGATTTTAAATCCAAGGTCTTCTAAGCTTCCATTTAAGCCTTAAAACTCTTGTGGCTTTCATAAAAAAGAAATGTGGTACCATGGTTTTATTTTTAAGCATATTACTTGTGAATTTGTTGGAGTACAGATGCTAAATTTGTATATTTGATTCCCATTTCTCAGATTCTGCATTTGAAGGGAGACAGAAAAGACTTTGATTTTGTTAAATCCAGTCTCTCGGCCGCGGGGTTTGATGTAGTTTACGACATTAATGGTGAGTCTTATTTCGGGTCGATCACTTCTGGTTTTAAAAAATTTTCACCCTGATTTGTTTTAAAACCCAATCGTTTTTTCGGTCTACACACTGCTACATGATTTCAGGGCGAGAAGCAGATGAAGTTGAACCAATTATAGATGCTTTGCCTAAGCTAGAGCAGTAAGATTTCCTAAATAATATCTGCTTTCTTTTCACAGCAATTGTTGTTAGTCATGTGCATCATGTTTCCCAATGCTAGAGGGAACAATTTTGATTTACAAAAATGATTTTGTGCCATTGGTGATACGGGATTGGTTTGTTGAGTTTCGGTGGGTGCAAGTATTCAGATTGTTGGACTTGAATTCGGAAACGTTGCCAGCATTGTTAATTTTATGAAGGTATAGAAGATATATTATTCAGCTGTCAAGGTAAATTTAGGTGTTTCAAGGAATCAAAGGTCATATATTCAAATCATAGTGATAATCCAGTGGAAATATTAAATGTTCTACAAGTTTTCCAAACTGAAATGTTACATTATAAGATAATTGTCCTATGAAATCAGTAAAGTACGTAAGCTAGTCCAAATATTACGATTCACAAAAATTTGCATAAAGAACCATGAAACAGAATATAGATTTTGCGGAGTTCGATGAAATGTGATGTATCTAATTATTCTCAGGTTTATTTACTGCTCTTCAGCTGGTGTATACCTCAAGTCTGATCTCCTACCTCATTTTGAGGTACCTTTTCTTTCCTTATAAACAAAAGCTTTCAGATTACTTTCTTTGTCCAATACCAAAATAATTGGTTCACTCAAAGTTTGACCTCCATTTCTCTTTCATTTCGTAGGTAGATGCAGTTGATCCAAAGAGTAGACATAAGGGAAAGCTTGAGACAGAGAGCTTACTGGCGTCGAAGGATGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAATCCTGTGGAAGAATGGTTCTTCCACCGATTGAAAGCCGGTCGCCCCATTCCAATTCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGTCTGTGCTGTTAAGGTCATTTAATGCAATAGGAACAAATCGTTAAGTCTGTTGTAGGTAGCAGGCCAATAGAGATCCTTTGATGTGAATAGCCTGGGAAAAGGATTATAGTTTAAAACATTTCTTGATGTTAATGTAGCAATTGAGATCAAGTTAATAATTGAACCTTTTTTGTCAACTGCAGGATTTGGCAAATGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATTTCCGGTGAAAAATATGTTTCATTTGATGGGTTAGCCAAAGCTTGTGCTAAGGTGATCTCTTGAAGAAATAATCAGGACACCGTAGTATTCATCATTGAGATAACATCTGAATTGGCTTCTTTCTCCTGTAATAAACTTCACAGGCTGGAGGCTTTCCTGAGCCCGAGATTGTTCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCATTCCCTTTCCGTGATCAGGTAATCTGGTGGATATAATGATAAATATGATGCAGTTTACTGGAATCTGATGGCTGAAATAGCACCATTGTTAATATAAATGTCATGCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGCGTGCTCGGGTGGAAGCCTGAATTTGATTTGGTGGAAGGTCTTGCAGACTCCTACAATTTGGACTTTGGCAGAGGCACTTTCAGAAAAGAGGCTGATTTTTCAACAGATGACATAATCCTTGGCAAGAGCCTGGTTCTTCAAGCTTGA

mRNA sequence

ATGGGGATCATGGCAAACCCAATGCCTGCTCACCACCAAAAATTTACTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGATTTCAATGGCGCCAGACTCCACGCCCAATATAAAAGGAAGGTTATGCAGCCAAAAGGAGGATTACATGTTACAGCAAGTGCCAAAAAGAACATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTTCTAGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATGCCGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGAAAAGACTTTGATTTTGTTAAATCCAGTCTCTCGGCCGCGGGGTTTGATGTAGTTTACGACATTAATGGGCGAGAAGCAGATGAAGTTGAACCAATTATAGATGCTTTGCCTAAGCTAGAGCAGTTTATTTACTGCTCTTCAGCTGGTGTATACCTCAAGTCTGATCTCCTACCTCATTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACATAAGGGAAAGCTTGAGACAGAGAGCTTACTGGCGTCGAAGGATGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAATCCTGTGGAAGAATGGTTCTTCCACCGATTGAAAGCCGGTCGCCCCATTCCAATTCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAATGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATTTCCGGTGAAAAATATGTTTCATTTGATGGGTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCTGAGCCCGAGATTGTTCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCATTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGCGTGCTCGGGTGGAAGCCTGAATTTGATTTGGTGGAAGGTCTTGCAGACTCCTACAATTTGGACTTTGGCAGAGGCACTTTCAGAAAAGAGGCTGATTTTTCAACAGATGACATAATCCTTGGCAAGAGCCTGGTTCTTCAAGCTTGA

Coding sequence (CDS)

ATGGGGATCATGGCAAACCCAATGCCTGCTCACCACCAAAAATTTACTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGATTTCAATGGCGCCAGACTCCACGCCCAATATAAAAGGAAGGTTATGCAGCCAAAAGGAGGATTACATGTTACAGCAAGTGCCAAAAAGAACATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTTCTAGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATGCCGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGAAAAGACTTTGATTTTGTTAAATCCAGTCTCTCGGCCGCGGGGTTTGATGTAGTTTACGACATTAATGGGCGAGAAGCAGATGAAGTTGAACCAATTATAGATGCTTTGCCTAAGCTAGAGCAGTTTATTTACTGCTCTTCAGCTGGTGTATACCTCAAGTCTGATCTCCTACCTCATTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACATAAGGGAAAGCTTGAGACAGAGAGCTTACTGGCGTCGAAGGATGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAATCCTGTGGAAGAATGGTTCTTCCACCGATTGAAAGCCGGTCGCCCCATTCCAATTCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAATGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATTTCCGGTGAAAAATATGTTTCATTTGATGGGTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCTGAGCCCGAGATTGTTCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCATTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGCGTGCTCGGGTGGAAGCCTGAATTTGATTTGGTGGAAGGTCTTGCAGACTCCTACAATTTGGACTTTGGCAGAGGCACTTTCAGAAAAGAGGCTGATTTTTCAACAGATGACATAATCCTTGGCAAGAGCCTGGTTCTTCAAGCTTGA

Protein sequence

MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA*

Homology

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BLAST of Chy8G149710 vs. ExPASy Swiss-Prot
Match: Q9SA52 (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41B PE=1 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 6.3e-189
Identity = 314/366 (85.79%), Postives = 344/366 (93.99%), Query Frame = 0


Query: 17  SFSVLPSSLSDFNGARLH--AQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFLSRL 76
           SFS+L SSLSDFNGA+LH   QYKRKV QPKG L+V+AS++K ILIMGGTRFIG+FLSR+
Sbjct: 13  SFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRI 72

Query: 77  LVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFD 136
           LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVKSSLSA GFD
Sbjct: 73  LVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFD 132

Query: 137 VVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLE 196
           VVYDINGREA+EVEPI++ALPKLEQ+IYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLE
Sbjct: 133 VVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLE 192

Query: 197 TESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKD 256
           TESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKD
Sbjct: 193 TESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKD 252

Query: 257 LANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKK 316
           LA AF+ VLGN+KAS+++FNISGEKYV+FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKK
Sbjct: 253 LATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKK 312

Query: 317 KPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILG 376
           K FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEADF+TDD+IL 
Sbjct: 313 KAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILS 372

Query: 377 KSLVLQ 381
           K LVLQ
Sbjct: 373 KKLVLQ 378

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BLAST of Chy8G149710 vs. ExPASy Swiss-Prot
Match: Q9LYA9 (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41A PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.6e-51
Identity = 130/370 (35.14%), Postives = 193/370 (52.16%), Query Frame = 0


Query: 16  TSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASA---KKNILIM----GGTRFIG 75
           +SFS L SS S  +     +    + + P+    V AS+   KKN+LI+    GG   IG
Sbjct: 38  SSFSSLSSSSSSSSSLLTFSLRTSRRLSPQ-KFTVKASSVGEKKNVLIVNTNSGGHAVIG 97

Query: 76  IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 135
            + ++ L+  GH VT+ T G   +   ++ P    ++      K +   G+  +   V +
Sbjct: 98  FYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVW--GNPAN---VAN 157

Query: 136 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 195
            +    FDVV D NG++ D V P++D      ++QF++ SSAG+Y  ++  PH E DAV 
Sbjct: 158 VVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVK 217

Query: 196 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 255
             + H   +  E  LA    NW S RP Y+ G  N    EEWFF R+   R +PIP SG+
Sbjct: 218 ADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGL 277

Query: 256 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 315
           Q+T + HV+DL++     + N + AS  +FN   ++ V+ DG+AK CA A G    EIVH
Sbjct: 278 QLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIVH 337

Query: 316 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 374
           Y+PK      KK F FR+ HF+A    AK +LGW+ + +L E L + +      G  +KE
Sbjct: 338 YDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKE 397

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BLAST of Chy8G149710 vs. ExPASy Swiss-Prot
Match: Q8NBZ7 (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.1e-11
Identity = 81/349 (23.21%), Postives = 147/349 (42.12%), Query Frame = 0


Query: 55  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 114
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 115 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 174
             Y +   +I HL       +++ + +     + +  +N         ++    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 175 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 234
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  + V     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 235 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 294
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL N  V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 295 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 354
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 355 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 376
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]

BLAST of Chy8G149710 vs. ExPASy Swiss-Prot
Match: Q91XL3 (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.1e-11
Identity = 81/349 (23.21%), Postives = 147/349 (42.12%), Query Frame = 0


Query: 55  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 114
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 115 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 174
             Y +   +I HL       +++ + +     + +  +N         ++    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 175 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 234
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  + V     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 235 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 294
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL N  V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 295 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 354
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 355 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 376
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]

BLAST of Chy8G149710 vs. ExPASy Swiss-Prot
Match: Q5R885 (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.1e-11
Identity = 81/349 (23.21%), Postives = 147/349 (42.12%), Query Frame = 0


Query: 55  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 114
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 115 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 174
             Y +   +I HL       +++ + +     + +  +N         ++    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 175 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 234
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  + V     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 235 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 294
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL N  V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 295 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 354
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 355 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 376
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

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BLAST of Chy8G149710 vs. ExPASy TrEMBL
Match: A0A0A0KZ66 (Epimerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G500330 PE=3 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.2e-220
Identity = 380/383 (99.22%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHA--QYKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHA  QYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 382
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. ExPASy TrEMBL
Match: A0A5A7SYF9 (Chloroplast stem-loop binding protein of 41 kDa b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00580 PE=3 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 2.7e-219
Identity = 375/381 (98.43%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILI 60

Query: 61  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 120
           MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD
Sbjct: 61  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 120

Query: 121 FDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEV 180
           FDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHFEV
Sbjct: 121 FDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEV 180

Query: 181 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
           DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 241 NSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPE 300
           NSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPEPE
Sbjct: 241 NSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPEPE 300

Query: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360
           IVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF
Sbjct: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360

Query: 361 RKEADFSTDDIILGKSLVLQA 382
           RKEADFSTDDIILGKSLVLQA
Sbjct: 361 RKEADFSTDDIILGKSLVLQA 381

[Close]

BLAST of Chy8G149710 vs. ExPASy TrEMBL
Match: A0A5D3C0Z4 (Chloroplast stem-loop binding protein of 41 kDa b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001730 PE=3 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 8.7e-218
Identity = 375/383 (97.91%), Postives = 378/383 (98.69%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHA--QYKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHA  QYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 382
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. ExPASy TrEMBL
Match: A0A1S3B4I6 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486073 PE=3 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 8.7e-218
Identity = 375/383 (97.91%), Postives = 378/383 (98.69%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHA--QYKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHA  QYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 382
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. ExPASy TrEMBL
Match: A0A6J1HAG5 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462045 PE=3 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.2e-213
Identity = 366/383 (95.56%), Postives = 374/383 (97.65%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHA--QYKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQK  SFSVLPSSLSDF+GARLHA  QYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           L+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADYADFKSK+LHLKGDR
Sbjct: 61  LVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGN+KASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGL DSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 382
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. NCBI nr
Match: XP_004146391.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativus])

HSP 1 Score: 768 bits (1982), Expect = 6.57e-280
Identity = 380/383 (99.22%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQ--YKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHAQ  YKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 381
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. NCBI nr
Match: KAA0034926.1 (chloroplast stem-loop binding protein of 41 kDa b [Cucumis melo var. makuwa])

HSP 1 Score: 764 bits (1974), Expect = 1.01e-278
Identity = 375/381 (98.43%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASAKKNILI 60

Query: 61  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 120
           MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD
Sbjct: 61  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 120

Query: 121 FDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEV 180
           FDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHFEV
Sbjct: 121 FDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEV 180

Query: 181 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
           DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 241 NSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPE 300
           NSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPEPE
Sbjct: 241 NSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPEPE 300

Query: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360
           IVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF
Sbjct: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360

Query: 361 RKEADFSTDDIILGKSLVLQA 381
           RKEADFSTDDIILGKSLVLQA
Sbjct: 361 RKEADFSTDDIILGKSLVLQA 381

[Close]

BLAST of Chy8G149710 vs. NCBI nr
Match: XP_008442117.1 (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis melo] >TYK05467.1 chloroplast stem-loop binding protein of 41 kDa b [Cucumis melo var. makuwa])

HSP 1 Score: 759 bits (1961), Expect = 1.04e-276
Identity = 375/383 (97.91%), Postives = 378/383 (98.69%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQ--YKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHAQ  YKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 381
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. NCBI nr
Match: KAE8649725.1 (hypothetical protein Csa_012138 [Cucumis sativus])

HSP 1 Score: 757 bits (1954), Expect = 1.22e-275
Identity = 374/378 (98.94%), Postives = 374/378 (98.94%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQ--YKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQKFTSFSVLPSSLSDFNGARLHAQ  YKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKS 376
           TFRKEADFSTDDIILG S
Sbjct: 361 TFRKEADFSTDDIILGVS 378

[Close]

BLAST of Chy8G149710 vs. NCBI nr
Match: XP_022961476.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita moschata] >KAG6590501.1 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 745 bits (1923), Expect = 6.47e-271
Identity = 366/383 (95.56%), Postives = 374/383 (97.65%), Query Frame = 0


Query: 1   MGIMANPMPAHHQKFTSFSVLPSSLSDFNGARLHAQ--YKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPM AHHQK  SFSVLPSSLSDF+GARLHAQ  YKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           L+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADYADFKSK+LHLKGDR
Sbjct: 61  LVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGN+KASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGL DSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 381
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Chy8G149710 vs. TAIR 10
Match: AT1G09340.1 (chloroplast RNA binding )

HSP 1 Score: 661.4 bits (1705), Expect = 4.5e-190
Identity = 314/366 (85.79%), Postives = 344/366 (93.99%), Query Frame = 0


Query: 17  SFSVLPSSLSDFNGARLH--AQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFLSRL 76
           SFS+L SSLSDFNGA+LH   QYKRKV QPKG L+V+AS++K ILIMGGTRFIG+FLSR+
Sbjct: 13  SFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRI 72

Query: 77  LVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFD 136
           LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVKSSLSA GFD
Sbjct: 73  LVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFD 132

Query: 137 VVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLE 196
           VVYDINGREA+EVEPI++ALPKLEQ+IYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLE
Sbjct: 133 VVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLE 192

Query: 197 TESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKD 256
           TESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKD
Sbjct: 193 TESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKD 252

Query: 257 LANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKK 316
           LA AF+ VLGN+KAS+++FNISGEKYV+FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKK
Sbjct: 253 LATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKK 312

Query: 317 KPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILG 376
           K FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEADF+TDD+IL 
Sbjct: 313 KAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILS 372

Query: 377 KSLVLQ 381
           K LVLQ
Sbjct: 373 KKLVLQ 378

[Close]

BLAST of Chy8G149710 vs. TAIR 10
Match: AT3G63140.1 (chloroplast stem-loop binding protein of 41 kDa )

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-52
Identity = 130/370 (35.14%), Postives = 193/370 (52.16%), Query Frame = 0


Query: 16  TSFSVLPSSLSDFNGARLHAQYKRKVMQPKGGLHVTASA---KKNILIM----GGTRFIG 75
           +SFS L SS S  +     +    + + P+    V AS+   KKN+LI+    GG   IG
Sbjct: 38  SSFSSLSSSSSSSSSLLTFSLRTSRRLSPQ-KFTVKASSVGEKKNVLIVNTNSGGHAVIG 97

Query: 76  IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 135
            + ++ L+  GH VT+ T G   +   ++ P    ++      K +   G+  +   V +
Sbjct: 98  FYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVW--GNPAN---VAN 157

Query: 136 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 195
            +    FDVV D NG++ D V P++D      ++QF++ SSAG+Y  ++  PH E DAV 
Sbjct: 158 VVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVK 217

Query: 196 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 255
             + H   +  E  LA    NW S RP Y+ G  N    EEWFF R+   R +PIP SG+
Sbjct: 218 ADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGL 277

Query: 256 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 315
           Q+T + HV+DL++     + N + AS  +FN   ++ V+ DG+AK CA A G    EIVH
Sbjct: 278 QLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIVH 337

Query: 316 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 374
           Y+PK      KK F FR+ HF+A    AK +LGW+ + +L E L + +      G  +KE
Sbjct: 338 YDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKE 397

[Close]

BLAST of Chy8G149710 vs. TAIR 10
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein )

HSP 1 Score: 46.2 bits (108), Expect = 6.8e-05
Identity = 42/164 (25.61%), Postives = 72/164 (43.90%), Query Frame = 0


Query: 52  ASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKI 111
           A+ K  IL++GGT +IG FL     K GH      R +A ++  + G++   + D    I
Sbjct: 2   ATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTI 61

Query: 112 LHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQ--FIYCSSAGVY 171
           LH  GD  D + +  ++             ++ D V   + ++  L+Q   I        
Sbjct: 62  LH--GDLNDHESLVKAI-------------KQVDVVISTVGSMQILDQTKIISAIKEAGN 121

Query: 172 LKSDLLPHFEVD-----AVDP-KSRHKGKLETESLLASKDVNWT 208
           +K  L   F VD     AV+P KS   GK++    + ++ + +T
Sbjct: 122 VKRFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

The following BLAST results are available for this feature:

BLAST of Chy8G149710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA52	6.3e-189	85.79	Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ...	[more]
Q9LYA9	3.6e-51	35.14	Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ...	[more]
Q8NBZ7	8.1e-11	23.21	UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1	[more]
Q91XL3	8.1e-11	23.21	UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1	[more]
Q5R885	8.1e-11	23.21	UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1	[more]

BLAST of Chy8G149710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ66	3.2e-220	99.22	Epimerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G500330 P...	[more]
A0A5A7SYF9	2.7e-219	98.43	Chloroplast stem-loop binding protein of 41 kDa b OS=Cucumis melo var. makuwa OX...	[more]
A0A5D3C0Z4	8.7e-218	97.91	Chloroplast stem-loop binding protein of 41 kDa b OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3B4I6	8.7e-218	97.91	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucumis melo...	[more]
A0A6J1HAG5	2.2e-213	95.56	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucurbita mo...	[more]

BLAST of Chy8G149710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146391.1	6.57e-280	99.22	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativu...	[more]
KAA0034926.1	1.01e-278	98.43	chloroplast stem-loop binding protein of 41 kDa b [Cucumis melo var. makuwa]	[more]
XP_008442117.1	1.04e-276	97.91	PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc...	[more]
KAE8649725.1	1.22e-275	98.94	hypothetical protein Csa_012138 [Cucumis sativus]	[more]
XP_022961476.1	6.47e-271	95.56	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita mosc...	[more]

BLAST of Chy8G149710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09340.1	4.5e-190	85.79	chloroplast RNA binding	[more]
AT3G63140.1	2.5e-52	35.14	chloroplast stem-loop binding protein of 41 kDa	[more]
AT1G75280.1	6.8e-05	25.61	NmrA-like negative transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 58..275 e-value: 6.3E-13 score: 48.7
None	No IPR available	GENE3D	3.40.50.720		coord: 53..353 e-value: 8.5E-42 score: 145.3
None	No IPR available	PANTHER	PTHR43725	UDP-GLUCOSE 4-EPIMERASE	coord: 34..374
None	No IPR available	PANTHER	PTHR43725:SF6	CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC	coord: 34..374
None	No IPR available	CDD	cd05265	SDR_a1	coord: 56..309 e-value: 6.20619E-97 score: 287.265
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 55..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G149710.1	Chy8G149710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003723	RNA binding