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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTAAAAGGGGAACCAAGAGCACGACTGTAGGCGGCGGAGGAAGTGGCGGAAGAAGCACAGGCAGCAGCACAAGAAGGCACACTATCCAAACTAACAAAGTCGCCTTCGAATACCCGAAACCGCCGCCACCGGCCATTATTATCTCAGGCAATATACTCATGGATTGTGGCCGTGCCGGCGTGGAAAAGGGCGGTGCTATGAGTTGGTGA mRNA sequence ATGATTAAAAGGGGAACCAAGAGCACGACTGTAGGCGGCGGAGGAAGTGGCGGAAGAAGCACAGGCAGCAGCACAAGAAGGCACACTATCCAAACTAACAAAGTCGCCTTCGAATACCCGAAACCGCCGCCACCGGCCATTATTATCTCAGGCAATATACTCATGGATTGTGGCCGTGCCGGCGTGGAAAAGGGCGGTGCTATGAGTTGGTGA Coding sequence (CDS) ATGATTAAAAGGGGAACCAAGAGCACGACTGTAGGCGGCGGAGGAAGTGGCGGAAGAAGCACAGGCAGCAGCACAAGAAGGCACACTATCCAAACTAACAAAGTCGCCTTCGAATACCCGAAACCGCCGCCACCGGCCATTATTATCTCAGGCAATATACTCATGGATTGTGGCCGTGCCGGCGTGGAAAAGGGCGGTGCTATGAGTTGGTGA Protein sequence MIKRGTKSTTVGGGGSGGRSTGSSTRRHTIQTNKVAFEYPKPPPPAIIISGNILMDCGRAGVEKGGAMSW*
Homology
BLAST of Chy8G148850 vs. NCBI nr
Match: KAG6603315.1 (hypothetical protein SDJN03_03924, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.2 bits (165), Expect = 1.57e-12 Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 3 KRGTKSTTVGGGGSGGRSTGSSTRRHTIQTNKVAFEYPKPPPPAIIISGNIL 54
K GTKSTTVGGGGSGGRS GS TRR T+QTNK E+ K PAII+SGN++
Sbjct: 19 KMGTKSTTVGGGGSGGRSRGS-TRRQTVQTNKATLEHQKKQQPAIILSGNLV 69
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6603315.1 | 1.57e-12 | 69.23 | hypothetical protein SDJN03_03924, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 9..32 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..42 |
Relationships
The following mRNA feature(s) are a part of this gene:
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