Chy8G148330 (gene) Cucumber (hystrix) v1

Overview
NameChy8G148330
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationchrH08: 5163434 .. 5173476 (-)
RNA-Seq ExpressionChy8G148330
SyntenyChy8G148330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGCAAATCAAATGAAAAGCTTTCTCATTGGACGAAAATTATGGCGTATTGTCACCGATGATATTACTAAACCAATCAAATAGGAAAACAAAGATGACAGTAAATTTATCGAACGCCTCGAAGATTGGAACAGTAAAAACCATCAGATTATCACCTGGCTTAGTAATACATCGATTTCTGCTATTCATACACAATTTGATGTCTTTGAGGATGCTAAAGAACTATGGGATTTTTTATCTACAAGATTTCAATCTGTCGGATTAGCTCACTACTATCAGCTACATAATAGTCTTGCCAATCTCAATCAAGATGCCAGTCAATCTGTTAACGAATATCTAGTTGTACTTCAACCTATCTGGACTCAACTTGATCAAGCTAAAATCAGAAAAGATCACCTTTGCCTTATTACGTCCAGAATATGAGTCTGTTCGGGCTGCTTTACTACACTGAAATCCCTTGCTCTCATTGAATGCAACTATCCAAGAGATTTTATTTGAGGAAAAACGCCTTGGCATCAATCTCTCGAAACAATCTGATGTTGTTCTTGCAAGTACTTATCCACTCAATTGAGCATCAAATGCATTTTGTAAAAACTGTAAGCTCTTCGGTCATAAATTCATTAATTGTCCTAAAATAGAGTGTAGGTACTGCCATAAACGTGGACATATTCTGGATAATTGCCCCACAAGACCACCTTGACCTCCAGGTTATTCTCCCAAAGCAAAGAACTTTACTAAACCCGACACCTCCTCTGTTGTTGGAGTTGCCTCAGATGATTCCACCTCTCCCCATTTTTAAATAAGTGATCTTCAGAGCCTATTAAATCAATTAATTTCATCATCTTCCTCTGCACTTGCCGTCTCACAAGGTAATCGATGGCTTCTTTGCTCTGCTTGTTGCAACCATATGCATCATATTTTTATCTTATGAATACTCCTCACTCTGCTAAATCTTTACCTCCAATTTATGCTGCTAATGGCAACTGTATGAACATCTCCCATATTGGCACCATTGATACCCCTAGTTTGAGTCTTCCTCATACTTATTGTGTCCCAAACTTAACCTTTAATCTAGTGTTAGTGGGTCAACTGTGTGATCTTGGATTAACCGTGTCTTTTTCTCCTAATGGTTGTCAGGTTCAGGATTCGCAGAAGGGATAGACGATTGGGACAAGTCGCAAAGTGGGAAGATTATTTGAGCTCCTATCACTCCAACTTTCTCCTCCTCCATCCATCTCTGCTCCTATCACTGACTCTGATACATATCAGTGGCACCTTCATCTTGGTCATGCTTCTTCCGAAAAACTTCGTCATTTAATTTCTGTTAACAATTTGAATAATGTCAGTAAGTTTGTTCATTTTAATTATTTAAATTGCAAACTTGCTAAGCAACCTGCTTTATCTTTTTCTCACTCCACTTCTATATGCGATAAACCTTTTGATTTAATTCATTAAGATATTTGGGGTCCTGCCCCACTACCACTGTCCATGGCTATCGCTATTATGTTATTTTTATTGATGATATTTATCGTTTTACATGGTTTTACTTTCTTAAACATCGCTCTGAATTATCTCGCACTTATATTGCGTTTGCTACCATGATTCACACTCAAATCTCTTGTCCTATTAAAATCCTCTGCACTAATAATGCCTTGGAGTATAAAGACTCCACCCTCCTTTCTTTTCTCTCTCAGCAGGGCACTCTTGTTCAGCGCTCCTGTCCCCACACTTCTCAACATAATGGGCTTGTTGAGCGCAAACATCATCACATCCTTGACTCAGTACGTGTGCTCCTTCTCTCTGCTTCTTCTCCTGAAAAATTTTGGGGTGAAGCAACCATCACATCCGTCTATACCATCAATCGACTTCCTTCCTCTGTTCTTCAGAACATCTCTCCATTCGAAAGACTTTATGGTATTTCTCCTAACTACTCTAACCTTAAAATTTTCGGTTGTGCTTGCTTTGTTCTTCTTCATCCTCATGAACACACTAAACTTGAACCACATGCCCGCCTTTGTTGCTTTCTTAGCTGTGGCACAGAACATAAAGGTTTTCGTTATTGGGACCCTATTTCTAACAGACTTCGTATATCTAGCCATGTCACATTTTGGGAACATACTATGTTCTCTCACTTGTCTTCCTTTCACACCTCCTTTTTCAGTCCCCGTTCTTTCTTCACTAATACATCAGTTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATACAGAGCTCACTCAATCTGCACCTGCTCTTGCAAACCCGAACCAGTCATCCGTCTCTGATGATAGTCCTGAACCTACTCTAGATATACCTCTTCGTTGTTCTACCCGGGTAAGAGAATCTCTCATCCATCTCCAAGATTGTCACTATTTTTCTACTATTTTTTCTCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTATTGACCCTTTATGGCAACAAGCAATGAATGATGAATTACAGGCTCTTGAAAAGACGCACACTTGGGCCTATGTTGATTTACCTCCTAGTAAAAGACCCATTGACTGCAAGTGGATTTATAAAATCAAGACTCACTCTGTTGGCATCATTGAACGTTATAAGGCTCGACTTGTGGCAAAAAGATACTCACAAGAATACGGTATTGACTATGAAGAAACGTTTGCTCATGTGGCTCGCATGACGTCTGTTAGAAGTCTATTAGTCGTTGCTGCTACCAAGCAATGACCTATCCTTCAGATGGATGTCAAAAATGCATTTCTTAATGGAACTCTTTCCAAAGAAGTCTATATGAAGCCACCTCTTGGTACGTCTCCACCTCCTCATAAGGTGTGTCTCCTACTTCGGGCATTATATGGTTTGAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTATCATTACTCAACTTGGGTTTTCTTCTAGCCCGCATGATATTGCGCTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATTACTGGTAATGATCCTCAGGCCATATCCGATCTCCAACAGTATCTTGGTCAACACTTTGAAATGACAGATCTTGGTTCTCTCAGTTACTTTCTTGGCCTTGAAGTCTCTAGAAGCTCAAATGGGTATCGATTGTCTCAAGCCAAATATGCCTCTGATCTTTTAGTCCGCTCAGGAATCACTGACTCCAACATAGCTTCAACACCATTAGATCCCAATGTTCATCTAACTTCTTATGATGGTGTTCCACTTGAAGATGTGAGTTTGTACCGACAACTTATTGGCAGTATCATCTATCTAACAGTGACTCGTCCGGACATTGCCTATGTTGTTCACATTGTCAGCCAGTTTATGGCTTCTCCTCGCACCATCTACTTTACTATTGTGTTGCGTATCCTTCGCTATATCAAAGGAATTTTTGGGCATGGACTTCAATTTTCTTCTAAATCATCTCTAGTATTATATGCTACTCTGATGCAGATTGGGCTGGGGATCCTACTGATAGACGATCTACAACAGGTTACTATTTCTACTTAGAAGATTCTCTCATCTCTTGGCGCAGTAAGAAACAAAGCGTTGTCTCTCATTCCAGTACTCCTCTGGCTTTGTTGGCTCATTGCTGATATGGGTGTTCCTCAACAGGGTCTCACCCTCTTTCATTGTGACAATCGTAGTGCCATCCAGATTGCGCACAATGATATCTTTCATGAACGTACGAAGCACATGGAAAATGACTGTCACTTTGTTCGTCATCATCTCTTGAGCAACACTCTCCTTTTACGCTCTGTGTCCACTACTGAGCAACCATCAGATATCTTCACCAAAGCCCTACCACCTAATCGCTTCAATCAGTTACTTACCAAACTCAAGTTGACAGCCACCCTACCACCTTGAGTTTGAGAGAGGGTATTAATGTAAACTACACAGTTTAGGCAAAATGTAATTTCTTACCTTATTTAGTTGTATAGGTTGTCTATATTTTCAAATTATCTCTTTGTAAAGTACACACAATATTTTTATCAATAAACAATTAAAGCACAATTATTTTGCAAGAATCTTGTATGAATTTCTTTATTTCTTTAAGAAATTTGCTTCAATTTTGTATAAATTTTGTTGTAATTCAATTCTTTGTTGAAGTAATGTATGAAATTTATTTTTAGCAAAGATTTTCTTGTAAGAAATGTCCATTTTTGGAGAAATAAAGATTTGAGTTGTGAAATTTCTTTATAACTCTTGTTCCTGTTTGAAGTTTTTTATTCTTAGCTTGGATTCCTAATGCTAAGATCATTTACAGACTTTGTTTAAAGAAATATTTTCTTTTGGGCAATTTGGTTTTCTAGAACTAAATTTGTCTTTAAATTTCAAAGTATGCAATAGGATTTGAAGTGAACACAATTGAATAATGATTCTTTCATCTCGATCTTGAAACAAATCACGAAAAACCTTTTTTCCTTTCAATTCTTTCTTGCATTTTCTTTTCCAATGATAAAGAAAACCCTCAATGCCCTAACTCTTGCCTATCTTTAATCATTTGAGTGGTTCTTTACATATTCATTACTTTTGAGTTGAAACCCACTACAATTTTCTTTGTCTCTTAATGCTTAAGTGTTTCTAACATTTTCTTTTAAGTGGAAATTCAATTAGTTCTTCCTACCTCCATTTCCTTGGGCTCGACATCTAACTAACACTACCATATTAGTAAGTAATGGTTTTACAAATTACTTTTGTCAACGTAAAATTTGGTAAGCCTTCTACCCTTATTTCAAATTACTTGAAATTTGGTAAGCTTTCTACCCTTATTCATATTCTTTCTAATAGCAGCTATCGTCCCATTTCTAATAGCACATATTATTGCATGTTTAGATATTAAGCGACCTTACCAATACAATTTGTTACACAGTTTCTTTACTCTTGTCATCATTCTAGTCATCCTCAACCTCTCTCAACAAGATTTAATGGCATAAAAGTCTACTGAACACCGACTTAACGTTCAAGAAATGACCAAATATAGTTTTCCTAAATATATATAGTTGCTTAGAAGTTAACTTATTTTTAATATTGGAGACTGTCTTAGCTAAGTGAGAACAACATGTCAAATTTGAGAAAATAAAGTTTGAAGTGAGGATTTTGGTGACTAGACATCTAACAAACAGAAAACACACATAATAGGAAAAAATAAAATAAGTCATTTGTCTAAAAACTCGAGGTTATCTCGATCTAATCTCGACCGAGAACAATATAAACACATGAAGAACTAAGGTCATTTACACTGGGACGTCACAAGATTAGGGATTTTAATGCATTATGTGAAGGATCTCGAACTAATCTCAAATGAAATCTACCTAAGGTCAAGTGAATCTAAGTTATTTTAAGAGCGAAGAAGTTGAAATCGGCAAGAATGAGCGCCTCGTTCTGCAAAATTGAAGATGAAGCTTTCAATACAAAAAGCGTATTTTGGTAATTGCATATTAGCTTTTATTTTAAATTTTAAAAGATTATATTAAATCTCAGGGTCGAGCTTGACCCAGATAGTCTGAGAAGAAACACTTTGGAGACTTTTCAAAAAAGTGTGCTATTTTTAAATGTTAAACCCACAACATGCCATTTTGGACAATTTCCCATAACCTTTTACGGGCCCTAACTTGTCCATATGAATCGAACTTATTGTTTGCAATAGACGACATTAATACACTAAGGTGGTCAAGTTTAACGTAGTCCTAACCTAATAGGTATGATCATCACGTTAAGATTAAGATAGATATTATCCCAACACAACAAGTTATAAAAAAAAGTTGTGATGAGTGTGTCATCAATCATAAAGAGTGGGTTTATGAAAGGGTCATTCGTAGAATTTTTTTCGCATAATGAACTTGAAATATTTTTTTTATTTAATAATTAGAGTTGGAACATCTAGCTTTAAAATTAATAACGTCGATATAACACGGTGTCTGTTGAGCTTATGATTCTCTTGGCAAAAGTTAGAATCAACTTTCGGAACCTATGAACAATAAATCATATGACTGATAGAAGTCTATCAACGTTAAAATCTATCATAGACATATTTTGTCTTTAAAAATATCGTTAAACACTTAGGGTGTGTTTGGACACAGAAGGGGAGTGTAACGGAGTGGAGTGGGCTATAACAATTCGCTCCTTGTGTTAGGACAATGTTTAATTAGTAGGGGATTAGGATTATGATTTAAAATAAAACATGCTTTACTATTCTTCAATCGTAGGAGTATTTATTTCCAGGGTTGGGAAGTTCATCGACGAACTTCCGAACACCACCTCCGATTATCGTCGTCGACCAATCTTTGACCACCACCTCTCTAGTGACTCTATTGGTGAACTTCCGACAACCAACTCTGGCGACCGCTACCACTGATCAACCTTAGCTTGAATTGTTTATAATAAAAACATATTTTTAGTATATAACAAACAAAAAAAACTTGTATATATGTAAATATTTTTTTAAAAAAAAATATTTTAAAACACAATTGTGTTTTTATTTTAAGAAGTTTGTATCAAAAGTGTTTAAATAAAAATGAATTATTGAAAAAAAAAATTCTAAGTCATTCCAAATACGCTTTTACTTTAATTATAATACTATTTTTTAAAAATACATTTTCTCATGTTTTTTTTCCCCTTTTTTGATGCTTTTTTTCTAAATTATTATTATCATTAGGTTATCTTTAATTTAAAATTATCTCTTTTTTCCTCTTGGTTTAAAATTAATGTTTCTTTTATTTTAATGGATAATATTAGTATATATATATATAGTATCTATATCAAATAATGAACAATATAGTTAACCAGATTTAATAAAATCACAAATCAATTTTTATAAAAGAGGTTATATTATAAAATTTTATAATAAGTACATGTAGTAAAAAACTAGTTTGTATAAATTGGTGGAGGATATAGTTTAAACTATTTGTTTCAAAAATAGTATTTCATGTACCTAAATAATTGTATGACAAAAAATAATAGTACCAAAAACATGATTTAAGTTAATCAATATTTATTTCATTTATATTGCTATAGTTTGGATTAATAATAATATGTATCTCAAACAGACACTATAATAACCTAAACTATAATATTATGCACTCCAAACACAAGACTATAATAACATATGCTAATAATCCTTTACGCACCAAACATAACTTATAATAATACACAATTTATTATAAAACTTTTAGACTATAATAACTCATTCAACACCAAAACGTGGACTTAATTATTTGATCTGAATGAGGTCTTACTATAATGAATCCAATCATAAGTAAACGACAAAAAGAAATTGATTATTATTCCATTGCTCATCACTCAACTCAAAATTTAAAAAATCAAGTCAGTATCAGTTAAATCAAGTATTGCTTAAGGACTTTTGGAGAGTTTTTCTTTCTTTCTTCTTTTTCTTTTTCTTTATATTTCTCTCACGATCAATTAAAATTGACCCAATAGTTCAGTGGTAAAAATTTGAAAGTATACATGTCATCAATCTTATTCAATTGTTTTAGAATAATATTTAGATTGATGTTACTATTTATTTAAATAAAAAAAGATGTATCATTTTCACTCCATTTTTATATGTTCAATATCTTGGAATTTATGTTTCAAAAACTTGTTGTTTGTAATTTAGAATCATATTCTATTCAATAAAGTTATTATTGAGGAACTATTAGTGAAATTAAATACTATATATTAAATCAAATAAACTAAAGTCTCAAGGCTTTCTTGAGTAAACTTGAACTTTATGTAAAAGCATATATATGTAAATCAAGTTCGAGTATGTAGCCTAAATGGTAGATAGTAGATTAATAAGGTTGGGCACCTTTGGAGACACTATGGATGCAGATCGTTTTGTAGTTAATACAAACGAAGTGATTCTAAATCGTTCATGTGGAAACATGAAAGTCAGGGCATCCTATGTAAAGAGTTTACATAAGACTAGAACCCTGAAATAGTCACTTTTACGTTATAACACCGTTGACTATATAAAACTGAATATTTTGATTATTGATGACCCATGTAACTTAATCTTAATCTTGAGCTAACTATGAACTTCTGTTTACATGAGATTATCCTTAGATATGTGTAGGTGAGGGTATCTTAATAGCGCTGGACCAATAAGCCTCGGGTAGATGGCTTAATTTCAGGGATAAGATCAGGTGGATGGCTGGAGGCACAAGGTGCCAAGATGGAATTCACTCCTATAAACTATAGGATTAGTAGAAAGGTTGTTTCTTTAAAGACTGAATCTAGGTCTTGAACAAGGGACTCCACCTTCTCATTGTCCCAAAAGGGAATCAGTTTATAAGTTGGACCTTAAACCCATTGTTTAATAGTAAATCAGTGGGACTTAAGGAGCAAGATGTAATCTCGAAGGTAAAAGGGTATTATGACTTAATCGAGGTTACGAACAACCTGTAAAAGGTTAACTTACCAATTATGGTTATATCAGATGGACACAACATATATCTATAGTGAGGGGAGTGCAACTACGATATTTTAGTGGAATGACTCGTTAGTTAATGAATCTTGATTAACTTTGTCTTAAAAGGATTTAGTTAGTTAATCTTGGATCGTTGAAGTCCATGATCTATAGATCCATTAGGTTCCCCAGCTAGCTTATATGGAATTAACTTAGAAGAATATGTTGGATTAGTTCAAATAGTTTGAATTAGAAAAGGAGAGAGAAACCGACAAGTATATGTGATCTAACAATTGGTTATCAATTTAGAGATAGAGAGCTTTATATTTAAATATGGTTTAAATATAGAAAAAATGAATGTGGATTCAATTTCAGAAGCTAAAAAATGATGGAAGTAGTCAAAGAGTTGACTTTTGACTTTGAAAAGTCAAATTTTGATTGGCAATATATTAAAATGTGATTTGAATTTTGGAAAAATGAATGTGGATTAATGCTAATGAGATTAGAAATAGTCAAGACGAGCAAAATGATAAAAAAGTCAAAATGTTGACTTTTGGCTTTATCTTGAATGGTTAAATGACCATTTTACCCTTTGACTAAAGTTAGTGAGAAAATTCAATAACTTGTTGGATAATCTCCTAACTTTTAGTAGGCTATGTGAAGACTCGTGGTAATGACATCAAGGCGACTAAGAGAAAATGCATTTTTACATAATTCCACTAACTCATTAGTGGGCTAGTTGGAAGTTCATGATGATGACACCAAGCCCACTAAGAGTTAATGGAATGTGAGATGTCGGGCTTTGGTGAGTTTAGACATAAAATGGTTGCATGCATTTTGTCTATTTAAAGGGAATAATAAGAGATATAGCAACGTTTTTATGGCTCATTTTGAAAAATGGCAAAACTACTTTCTCTTTTGAATTCTAGCAAATAGCATTTTTTGCACGTGCATGGTATTTTATAAAATACCAAAATATCCTCCTTCTCGAATTGTAATTATTTCGTTTCTACCTGGAAAAGATACAACTACCCATATCATAACTTTTTTCTTAATATCTCGGGACTCAACTAATTGATTCAACATTTTAATAATTTTATTCAATCTTACTAATTTCAAAATAACCAAATTGAATTTGAATTTCAAAATAACCCAATTAGATTTCAAAATAATAAAATTATTATTTTTCAGAATTTGAGAATCCAAGATAGATTTTGTATCAAAATAACCTTAATTGAATTTCAAAATTAAAAAATATCAACTTGTTTGCTATCTTATTTTAAAATAACATTAATGGCTTGAATATCAAGATAACCAAATTATTATTTTGAAATTGTGAGAATCTCAACATTAATTTCATTTTAAAATAAATTTCAAAATAACCAAATTATTAATTTTCGAATCAGGTAATCTCAACTATTGATTTCAAAATAACCTAGTTATTATTTTGAATTTAGGAGAAATTCAACCATTGATTTTATTTCAAAATAACGTTTTAATATCAAAATAACATTCATTGGTTGAATCACAAAAATAACTAAATTATTATTTTGAATTAAAATTTTCTTATGCTCTTTTTGTTTAAATGAGAACTCGCTTATTTGTTTGTTTCCCAA

mRNA sequence

TGGGCAAATCAAATGAAAAGCTTTCTCATTGGACGAAAATTATGGCGTATTGTCACCGATGATATTACTAAACCAATCAAATAGGAAAACAAAGATGACAGTAAATTTATCGAACGCCTCGAAGATTGGAACAGTAAAAACCATCAGATTATCACCTGGCTTAGTAATACATCGATTTCTGCTATTCATACACAATTTGATGTCTTTGAGGATGCTAAAGAACTATGGGATTTTTTATCTACAAGATTTCAATCTGTCGGATTAGCTCACTACTATCAGCTACATAATAGTCTTGCCAATCTCAATCAAGATGCCAGTCAATCTGTTAACGAATATCTAGTTGTACTTCAACCTATCTGGACTCAACTTGATCAAGCTAAAATCAGAAAAGATCACCTTTGCCTTATTACGTCCAGAATATGAGTCTGTTCGGGCTGCTTTACTACACTGAAATCCCTTGCTCTCATTGAATGCAACTATCCAAGAGATTTTATTTGAGGAAAAACATGATTCCACCTCTCCCCATTTTTAAATAAGTGATCTTCAGAGCCTATTAAATCAATTAATTTCATCATCTTCCTCTGCACTTGCCGTCTCACAAGAACTCGCTTATTTGTTTGTTTCCCAA

Coding sequence (CDS)

TGGGCAAATCAAATGAAAAGCTTTCTCATTGGACGAAAATTATGGCGTATTGTCACCGATGATATTACTAAACCAATCAAATAGGAAAACAAAGATGACAGTAAATTTATCGAACGCCTCGAAGATTGGAACAGTAAAAACCATCAGATTATCACCTGGCTTAGTAATACATCGATTTCTGCTATTCATACACAATTTGATGTCTTTGAGGATGCTAAAGAACTATGGGATTTTTTATCTACAAGATTTCAATCTGTCGGATTAGCTCACTACTATCAGCTACATAATAGTCTTGCCAATCTCAATCAAGATGCCAGTCAATCTGTTAACGAATATCTAGTTGTACTTCAACCTATCTGGACTCAACTTGATCAAGCTAAAATCAGAAAAGATCACCTTTGCCTTATTACGTCCAGAATATGAGTCTGTTCGGGCTGCTTTACTACACTGAAATCCCTTGCTCTCATTGAATGCAACTATCCAAGAGATTTTATTTGAGGAAAAACATGATTCCACCTCTCCCCATTTTTAAATAAGTGATCTTCAGAGCCTATTAAATCAATTAATTTCATCATCTTCCTCTGCACTTGCCGTCTCACAAGAACTCGCTTATTTGTTTGTTTCCCAA

Protein sequence

WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSISAIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIWTQLDQAKIRKDHLCLITSRI*VCSGCFTTLKSLALIECNYPRDFI*GKT*FHLSPFLNK*SSEPIKSINFIIFLCTCRLTRTRLFVCFPX
Homology
[Close]
BLAST of Chy8G148330 vs. ExPASy TrEMBL
Match: A0A5A7UCC7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00790 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.2e-61
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELWDFLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWDFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 137
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. ExPASy TrEMBL
Match: A0A5A7UGZ4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002020 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.3e-61
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTRDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD F++AKELWDFLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFDNAKELWDFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 137
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.3e-61
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELW+FLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 137
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.3e-61
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELW+FLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 137
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.3e-61
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELW+FLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 137
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. NCBI nr
Match: KAA0064095.1 (uncharacterized protein E6C27_scaffold99G001080 [Cucumis melo var. makuwa] >TYK18486.1 uncharacterized protein E5676_scaffold2032G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (601), Expect = 4.21e-75
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           W NQ+KSFLIGRKLWRIVT DITKP K + +DD KFI+RLE+W++KNHQIITWLSNTSI 
Sbjct: 22  WTNQIKSFLIGRKLWRIVTGDITKPTKQDKEDDGKFIKRLEEWDNKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE +KELWDFLSTRF+SVGLAHYYQLHN+L NLNQ A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFESSKELWDFLSTRFKSVGLAHYYQLHNNLVNLNQKAGQSVNEYLTVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 136
           TQLDQAKI KDHL LI
Sbjct: 142 TQLDQAKISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. NCBI nr
Match: TYK29664.1 (Zinc finger, CCHC-type [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (600), Expect = 5.59e-74
Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITK  K E +DDSKFIE LE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKLTKQEKEDDSKFIECLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELW+FLSTRF+SVGL HYYQLHNSL NLNQD  QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWNFLSTRFKSVGLTHYYQLHNSLVNLNQDVGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 136
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. NCBI nr
Match: KAA0062663.1 (putative glycosyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (619), Expect = 7.21e-73
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W+SKNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELW+FLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 136
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. NCBI nr
Match: XP_008449924.1 (PREDICTED: uncharacterized protein LOC103491654 [Cucumis melo])

HSP 1 Score: 232 bits (591), Expect = 7.58e-73
Identity = 111/136 (81.62%), Postives = 119/136 (87.50%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DI K  K + +DD KFIERLE+W++KNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDIAKLTKQDKEDDGKFIERLEEWDNKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE AKELWDFLSTRF+SV LAHYYQLHN+L NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFESAKELWDFLSTRFKSVELAHYYQLHNNLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 136
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQANISKDHLRLI 157

[Close]
BLAST of Chy8G148330 vs. NCBI nr
Match: KAA0050074.1 (Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (616), Expect = 1.45e-72
Identity = 115/136 (84.56%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   WANQMKSFLIGRKLWRIVTDDITKPIK*ENKDDSKFIERLEDWNSKNHQIITWLSNTSIS 60
           WANQMKSFLIGRKLWRIVT DITKP K + +DDSKFIERLE+W++KNHQIITWLSNTSI 
Sbjct: 22  WANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDNKNHQIITWLSNTSIP 81

Query: 61  AIHTQFDVFEDAKELWDFLSTRFQSVGLAHYYQLHNSLANLNQDASQSVNEYLVVLQPIW 120
           AIHTQFD FE+AKELW+FLSTRF+SVGLAHYYQLHNSL NLNQ+A QSVNEYL VLQPIW
Sbjct: 82  AIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIW 141

Query: 121 TQLDQAKIRKDHLCLI 136
           TQLDQA I KDHL LI
Sbjct: 142 TQLDQATISKDHLRLI 157

The following BLAST results are available for this feature:
BLAST of Chy8G148330 vs.
Match NameE-valueIdentityDescription
BLAST of Chy8G148330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UCC72.2e-6186.03Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UGZ46.3e-6185.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7VIT88.3e-6185.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3D7V88.3e-6185.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7T8F28.3e-6185.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
BLAST of Chy8G148330 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0064095.14.21e-7581.62uncharacterized protein E6C27_scaffold99G001080 [Cucumis melo var. makuwa] >TYK1... [more]
TYK29664.15.59e-7483.82Zinc finger, CCHC-type [Cucumis melo var. makuwa][more]
KAA0062663.17.21e-7385.29putative glycosyltransferase [Cucumis melo var. makuwa][more]
XP_008449924.17.58e-7381.62PREDICTED: uncharacterized protein LOC103491654 [Cucumis melo][more]
KAA0050074.11.45e-7284.56Integrase, catalytic core [Cucumis melo var. makuwa][more]
BLAST of Chy8G148330 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 49..126
e-value: 1.7E-6
score: 28.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G148330.1Chy8G148330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding