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Chy8G147860 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGAGGTTTGGGGTGTGAGAGGATCTAACTTTCTGAAGCTCATTTGTCAGGTAAGACATAAGCGAGGCAGATTGACTTTGCAGGAGGAGGATGAACAACCAAAGAAGAAGGTTCAGATGGGCATGCCTGCAACACAATGGATCAGTGTGTATAATGCTCGGCGGCCTATGAAACAAAGGTATTCATTCATAAAATGATAGATTGTGCTTTAACCACATTGAGATGCATAAACTATTCATAAATTATACACCATGTTTGTTTCTGGGTCGCCACATAATTCTGAAATGTATATACTGTATCATCCTTACAAGATGGGGTGAAATAATGAATTATTTTGTTGTGTAGGTATCACTATAATGTAGCTGATGCAAGGCTTGCGCAACATATAGAGAAAGGGAATGATGATGGCTTGTTTATAAGTAGTGTAGCCTCATGTCAGAATTTATGGGCCTTGATAATGGATGTTGGCACTGGGTTTTCATCACAGGTTTATGAACTTTCACCCCATTTTCTTCACATGGTAACTTACTTTTTATCCCTTCTTGGAATGGCATCAATAATTTTGGTACCTATCACACGAACTGAACTTATCTCATTTAACCTTTAACTTCTATGGGTCCAATTTTATTTATTGACGAATTGGTTTGTGAATGAAGGAATGGATCATGGAGCAATGAGAAAAGAACTATTATATTACAGCAGTAGCCGGAGTCATCAATGGCAGCTCATTGGTTGTAATGTCAAAGGGTCAGTTTGAATATTTTACCAATCTTCAATTGTAGAGTTCTCATGATTTTATCATTATGTTTATAAATGTTAATTGAGTTAATTTAATGATGACTGGCACCCAGTACTTGCAACAGTCATACAAAATCAGTGATTCATTTCCATTCAAATGGATAAACAAAAGGTTGAGGGAGAGATTCTATGTAACGACAATGGCCACCTGGGGAAGTAGGTGGGCCGTCGTAATGTCCCGTGGATCAGGATTTTTTGATCAG ATGGTAGAGGTTTGGGGTGTGAGAGGATCTAACTTTCTGAAGCTCATTTGTCAGGTAAGACATAAGCGAGGCAGATTGACTTTGCAGGAGGAGGATGAACAACCAAAGAAGAAGGTTCAGATGGGCATGCCTGCAACACAATGGATCAGTGTGTATAATGCTCGGCGGCCTATGAAACAAAGGTATCACTATAATGTAGCTGATGCAAGGCTTGCGCAACATATAGAGAAAGGGAATGATGATGGCTTGTTTATAAGTAGTGTAGCCTCATGTCAGAATTTATGGGCCTTGATAATGGATGTTGGCACTGGGTTTTCATCACAGTACTTGCAACAGTCATACAAAATCAGTGATTCATTTCCATTCAAATGGATAAACAAAAGGTTGAGGGAGAGATTCTATGTAACGACAATGGCCACCTGGGGAAGTAGGTGGGCCGTCGTAATGTCCCGTGGATCAGGATTTTTTGATCAG ATGGTAGAGGTTTGGGGTGTGAGAGGATCTAACTTTCTGAAGCTCATTTGTCAGGTAAGACATAAGCGAGGCAGATTGACTTTGCAGGAGGAGGATGAACAACCAAAGAAGAAGGTTCAGATGGGCATGCCTGCAACACAATGGATCAGTGTGTATAATGCTCGGCGGCCTATGAAACAAAGGTATCACTATAATGTAGCTGATGCAAGGCTTGCGCAACATATAGAGAAAGGGAATGATGATGGCTTGTTTATAAGTAGTGTAGCCTCATGTCAGAATTTATGGGCCTTGATAATGGATGTTGGCACTGGGTTTTCATCACAGTACTTGCAACAGTCATACAAAATCAGTGATTCATTTCCATTCAAATGGATAAACAAAAGGTTGAGGGAGAGATTCTATGTAACGACAATGGCCACCTGGGGAAGTAGGTGGGCCGTCGTAATGTCCCGTGGATCAGGATTTTTTGATCAG MVEVWGVRGSNFLKLICQVRHKRGRLTLQEEDEQPKKKVQMGMPATQWISVYNARRPMKQRYHYNVADARLAQHIEKGNDDGLFISSVASCQNLWALIMDVGTGFSSQYLQQSYKISDSFPFKWINKRLRERFYVTTMATWGSRWAVVMSRGSGFFDQ Homology
BLAST of Chy8G147860 vs. ExPASy Swiss-Prot
Match: Q852L0 (Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 3.4e-48 Identity = 100/186 (53.76%), Postives = 121/186 (65.05%), Query Frame = 0
BLAST of Chy8G147860 vs. ExPASy TrEMBL
Match: A0A1S3CGY9 (uncharacterized protein LOC103500783 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500783 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.7e-63 Identity = 132/190 (69.47%), Postives = 137/190 (72.11%), Query Frame = 0
BLAST of Chy8G147860 vs. ExPASy TrEMBL
Match: A0A5D3BXI5 (Casein kinase 1-like protein HD16 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00270 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.7e-63 Identity = 132/190 (69.47%), Postives = 137/190 (72.11%), Query Frame = 0
BLAST of Chy8G147860 vs. ExPASy TrEMBL
Match: A0A6J1JST5 (casein kinase 1-like protein HD16 OS=Cucurbita maxima OX=3661 GN=LOC111488576 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.6e-62 Identity = 130/190 (68.42%), Postives = 136/190 (71.58%), Query Frame = 0
BLAST of Chy8G147860 vs. ExPASy TrEMBL
Match: A0A0A0KB34 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452910 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.6e-62 Identity = 130/190 (68.42%), Postives = 137/190 (72.11%), Query Frame = 0
BLAST of Chy8G147860 vs. ExPASy TrEMBL
Match: A0A6J1GN24 (casein kinase 1-like protein HD16 OS=Cucurbita moschata OX=3662 GN=LOC111455941 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.6e-62 Identity = 130/190 (68.42%), Postives = 136/190 (71.58%), Query Frame = 0
BLAST of Chy8G147860 vs. NCBI nr
Match: XP_008462429.1 (PREDICTED: uncharacterized protein LOC103500783 isoform X1 [Cucumis melo] >XP_008462430.1 PREDICTED: uncharacterized protein LOC103500783 isoform X1 [Cucumis melo] >XP_008462431.1 PREDICTED: uncharacterized protein LOC103500783 isoform X1 [Cucumis melo] >XP_008462432.1 PREDICTED: uncharacterized protein LOC103500783 isoform X1 [Cucumis melo] >KAA0051040.1 casein kinase 1-like protein HD16 isoform X1 [Cucumis melo var. makuwa] >TYK03835.1 casein kinase 1-like protein HD16 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 246 bits (629), Expect = 1.28e-74 Identity = 133/201 (66.17%), Postives = 140/201 (69.65%), Query Frame = 0
BLAST of Chy8G147860 vs. NCBI nr
Match: XP_023547801.1 (casein kinase 1-like protein HD16 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 244 bits (622), Expect = 1.33e-73 Identity = 131/201 (65.17%), Postives = 139/201 (69.15%), Query Frame = 0
BLAST of Chy8G147860 vs. NCBI nr
Match: XP_022953372.1 (casein kinase 1-like protein HD16 [Cucurbita moschata]) HSP 1 Score: 244 bits (622), Expect = 1.33e-73 Identity = 131/201 (65.17%), Postives = 139/201 (69.15%), Query Frame = 0
BLAST of Chy8G147860 vs. NCBI nr
Match: KAG6575511.1 (Casein kinase 1-like protein HD16, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244 bits (622), Expect = 1.33e-73 Identity = 131/201 (65.17%), Postives = 139/201 (69.15%), Query Frame = 0
BLAST of Chy8G147860 vs. NCBI nr
Match: XP_022992166.1 (casein kinase 1-like protein HD16 [Cucurbita maxima]) HSP 1 Score: 244 bits (622), Expect = 1.33e-73 Identity = 131/201 (65.17%), Postives = 139/201 (69.15%), Query Frame = 0
BLAST of Chy8G147860 vs. TAIR 10
Match: AT2G25760.1 (Protein kinase family protein ) HSP 1 Score: 221.1 bits (562), Expect = 6.4e-58 Identity = 112/189 (59.26%), Postives = 129/189 (68.25%), Query Frame = 0
BLAST of Chy8G147860 vs. TAIR 10
Match: AT2G25760.2 (Protein kinase family protein ) HSP 1 Score: 221.1 bits (562), Expect = 6.4e-58 Identity = 112/189 (59.26%), Postives = 129/189 (68.25%), Query Frame = 0
BLAST of Chy8G147860 vs. TAIR 10
Match: AT3G03940.1 (Protein kinase family protein ) HSP 1 Score: 204.5 bits (519), Expect = 6.2e-53 Identity = 107/186 (57.53%), Postives = 123/186 (66.13%), Query Frame = 0
BLAST of Chy8G147860 vs. TAIR 10
Match: AT3G13670.1 (Protein kinase family protein ) HSP 1 Score: 201.1 bits (510), Expect = 6.8e-52 Identity = 104/190 (54.74%), Postives = 127/190 (66.84%), Query Frame = 0
BLAST of Chy8G147860 vs. TAIR 10
Match: AT5G18190.1 (Protein kinase family protein ) HSP 1 Score: 197.6 bits (501), Expect = 7.6e-51 Identity = 103/186 (55.38%), Postives = 121/186 (65.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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