Chy8G147500 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G147500
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Plant transposase
Location	chrH08: 3159106 .. 3160067 (+)
RNA-Seq Expression	Chy8G147500
Synteny	Chy8G147500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTGAAATGTCTCAAATGAGATCTTTAATATCTCACCTTCTTAAATCATAAGTATGAAGTTTCATAGCATTTTTTAACATAGGTTTATATTCTTTATTTCTAATTGTTTAACTTGTACACACTTTTTTTCTATTTTCTAACTTTAGGGTAATGGAAGCGGCCAACTTTCTAACTCTACAAATGATCAAATTGTTAACAATGTTGCTACTAACCCGATTGGAACTTCACCTCCGGTAAGGTCTTTAATTATTTATTTCTAATACTTTATTTCTAATTGTTATAACTAGCTCATTATGCTTAATATTACACTTTATATTGTCCTGTTGGTATAGAGTATCAATAACAACAATACTCTCCGCAAGTGCACATTGCTAGATTGGTGTGGTATAGGAGAGGTGGTTACTGAAGGTAGCTGGTCCTCAAATGATCCTAAAGTTACTTTTTACCATGTTCCTCTCAGTCCACACGCTGCTAGAGTTTGGGTGGACTTGCCAAAGAAGGCAGATGCATTTTTATGGAGACCTAACTCAAAGATGACATACATTGAGGATGTTGTTGGAAGTATAGTAGCATGGCCTCTTGACAAAGTTATTTTAAGTATGTACATTTTTTAACTATTAACTTCTAGTTAGCTTTTTTCACTAAAATCTTTGTGTATAAAGTTAATTATTTATTTAGTTTTTGTTCATCATTTTTTTGTAGGTTGATAAAAGAATAATTGTACAAAGTCCAAAAATGTCATTATCAAGACACAACAAGCTTAAGTGTTTATATTTACACATCATATTAACTTTTTGTAACTAATGGATAGGCACTATAGGAAAAAATAAGTCTACGATATCATATTACCTTTTTGTAACTATTACCTAGGTTGATCATTGTGTTATGTTGAATGATCTATTCGTGACTATTTTTTGTGAGACAACATGAATAACATTTTGTGCAGTGCAATATAA

mRNA sequence

ATGGAGGTTGAAATGTCTCAAATGAGATCTTTAATATCTCACCTTCTTAAATCATAAGGTAATGGAAGCGGCCAACTTTCTAACTCTACAAATGATCAAATTGTTAACAATGTTGCTACTAACCCGATTGGAACTTCACCTCCGAGTATCAATAACAACAATACTCTCCGCAAGTGCACATTGCTAGATTGGTGTGGTATAGGAGAGGTGGTTACTGAAGGTAGCTGGTCCTCAAATGATCCTAAAGTTACTTTTTACCATGTTCCTCTCAGTCCACACGCTGCTAGAGTTTGGGTGGACTTGCCAAAGAAGGCAGATGCATTTTTATGGAGACCTAACTCAAAGATGACATACATTGAGGATGTTGTTGGAAGTATATGCAATATAA

Coding sequence (CDS)

ATGGAGGTTGAAATGTCTCAAATGAGATCTTTAATATCTCACCTTCTTAAATCATAAGGTAATGGAAGCGGCCAACTTTCTAACTCTACAAATGATCAAATTGTTAACAATGTTGCTACTAACCCGATTGGAACTTCACCTCCGAGTATCAATAACAACAATACTCTCCGCAAGTGCACATTGCTAGATTGGTGTGGTATAGGAGAGGTGGTTACTGAAGGTAGCTGGTCCTCAAATGATCCTAAAGTTACTTTTTACCATGTTCCTCTCAGTCCACACGCTGCTAGAGTTTGGGTGGACTTGCCAAAGAAGGCAGATGCATTTTTATGGAGACCTAACTCAAAGATGACATACATTGAGGATGTTGTTGGAAGTATATGCAATATAA

Protein sequence

MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCTLLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIEDVVGSICNIX

Homology

[Close]

BLAST of Chy8G147500 vs. ExPASy TrEMBL
Match: A0A5D3DEJ8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00110 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 108/125 (86.40%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPPSINNNNTLRKCT
Sbjct: 311 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCT 370

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW G GEVV EG WSSNDP VT +HVPL PHA RVWVDLPKK+DAFLWRPNS+MTYIE
Sbjct: 371 LLDWGGTGEVVAEGRWSSNDPNVTVHHVPLGPHAIRVWVDLPKKSDAFLWRPNSEMTYIE 430

Query: 121 DVVGS 126
           D VGS
Sbjct: 431 DAVGS 435

[Close]

BLAST of Chy8G147500 vs. ExPASy TrEMBL
Match: A0A5D3BM96 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00630 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 107/125 (85.60%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPPSINNNNTLRKCT
Sbjct: 341 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCT 400

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW GIGEVV EG WSSNDP V  +HVPL PHA RVWVDLPKK D FLWRPNS+MTYIE
Sbjct: 401 LLDWGGIGEVVAEGRWSSNDPNVIVHHVPLGPHAVRVWVDLPKKLDTFLWRPNSEMTYIE 460

Query: 121 DVVGS 126
           D VGS
Sbjct: 461 DAVGS 465

[Close]

BLAST of Chy8G147500 vs. ExPASy TrEMBL
Match: A0A5A7SMK7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00730 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 107/125 (85.60%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPPSINNNNTLRKCT
Sbjct: 744 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCT 803

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW GIGEVV EG WSSNDP V  +HVPL PHA RVWVDLPKK D FLWRPNS+MTYIE
Sbjct: 804 LLDWGGIGEVVAEGRWSSNDPNVIVHHVPLGPHAVRVWVDLPKKLDTFLWRPNSEMTYIE 863

Query: 121 DVVGS 126
           D VGS
Sbjct: 864 DAVGS 868

[Close]

BLAST of Chy8G147500 vs. ExPASy TrEMBL
Match: A0A5D3CA24 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00160 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPP+INNNNTLRKCT
Sbjct: 1   MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPNINNNNTLRKCT 60

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW G  EVV+EG WSSND  VT +HVPL PHA RVWVDLPKK+DAFLWRPNS+MTYI+
Sbjct: 61  LLDWGGTEEVVSEGRWSSNDLNVTVHHVPLGPHAVRVWVDLPKKSDAFLWRPNSEMTYID 120

Query: 121 DVVGS 126
           D VGS
Sbjct: 121 DAVGS 125

[Close]

BLAST of Chy8G147500 vs. ExPASy TrEMBL
Match: A0A5A7UVE9 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G004090 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPP+INNNNTLRKCT
Sbjct: 157 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPNINNNNTLRKCT 216

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW G  EVV+EG WSSND  VT +HVPL PHA RVWVDLPKK+DAFLWRPNS+MTYI+
Sbjct: 217 LLDWGGTEEVVSEGRWSSNDLNVTVHHVPLGPHAVRVWVDLPKKSDAFLWRPNSEMTYID 276

Query: 121 DVVGS 126
           D VGS
Sbjct: 277 DAVGS 281

[Close]

BLAST of Chy8G147500 vs. NCBI nr
Match: TYK08200.1 (uncharacterized protein E5676_scaffold1503G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 6.42e-70
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPP+INNNNTLRKCT
Sbjct: 1   MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPNINNNNTLRKCT 60

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW G  EVV+EG WSSND  VT +HVPL PHA RVWVDLPKK+DAFLWRPNS+MTYI+
Sbjct: 61  LLDWGGTEEVVSEGRWSSNDLNVTVHHVPLGPHAVRVWVDLPKKSDAFLWRPNSEMTYID 120

Query: 121 DVVGS 125
           D VGS
Sbjct: 121 DAVGS 125

[Close]

BLAST of Chy8G147500 vs. NCBI nr
Match: TYK21965.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (572), Expect = 4.82e-68
Identity = 108/125 (86.40%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPPSINNNNTLRKCT
Sbjct: 311 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCT 370

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW G GEVV EG WSSNDP VT +HVPL PHA RVWVDLPKK+DAFLWRPNS+MTYIE
Sbjct: 371 LLDWGGTGEVVAEGRWSSNDPNVTVHHVPLGPHAIRVWVDLPKKSDAFLWRPNSEMTYIE 430

Query: 121 DVVGS 125
           D VGS
Sbjct: 431 DAVGS 435

[Close]

BLAST of Chy8G147500 vs. NCBI nr
Match: TYK00394.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (566), Expect = 5.47e-68
Identity = 107/125 (85.60%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPPSINNNNTLRKCT
Sbjct: 341 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCT 400

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW GIGEVV EG WSSNDP V  +HVPL PHA RVWVDLPKK D FLWRPNS+MTYIE
Sbjct: 401 LLDWGGIGEVVAEGRWSSNDPNVIVHHVPLGPHAVRVWVDLPKKLDTFLWRPNSEMTYIE 460

Query: 121 DVVGS 125
           D VGS
Sbjct: 461 DAVGS 465

[Close]

BLAST of Chy8G147500 vs. NCBI nr
Match: KAA0057519.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 9.43e-68
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMRSLISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSPP+INNNNTLRKCT
Sbjct: 157 MEVEMTQMRSLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPPNINNNNTLRKCT 216

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLDW G  EVV+EG WSSND  VT +HVPL PHA RVWVDLPKK+DAFLWRPNS+MTYI+
Sbjct: 217 LLDWGGTEEVVSEGRWSSNDLNVTVHHVPLGPHAVRVWVDLPKKSDAFLWRPNSEMTYID 276

Query: 121 DVVGS 125
           D VGS
Sbjct: 277 DAVGS 281

[Close]

BLAST of Chy8G147500 vs. NCBI nr
Match: KAA0051313.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (536), Expect = 2.75e-65
Identity = 103/125 (82.40%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MEVEMSQMRSLISHLLKS*GNGSGQLSNSTNDQIVNNVATNPIGTSPPSINNNNTLRKCT 60
           MEVEM+QMR LISHLLKS GNGS QLSN+TNDQ+VNNVATNPIGTSP SINNNNTLRKCT
Sbjct: 184 MEVEMTQMRYLISHLLKSQGNGSDQLSNATNDQVVNNVATNPIGTSPLSINNNNTLRKCT 243

Query: 61  LLDWCGIGEVVTEGSWSSNDPKVTFYHVPLSPHAARVWVDLPKKADAFLWRPNSKMTYIE 120
           LLD  G GEVV EG WSSNDP VT +HVPL PHA +VWVDLPKK+DAFLWRPNS+MTY E
Sbjct: 244 LLDCGGTGEVVAEGRWSSNDPNVTVHHVPLGPHAVKVWVDLPKKSDAFLWRPNSEMTYTE 303

Query: 121 DVVGS 125
           D VGS
Sbjct: 304 DAVGS 308

The following BLAST results are available for this feature:

BLAST of Chy8G147500 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G147500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEJ8	1.3e-56	86.40	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00...	[more]
A0A5D3BM96	6.5e-56	85.60	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G0...	[more]
A0A5A7SMK7	6.5e-56	85.60	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CA24	4.7e-54	83.20	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7UVE9	4.7e-54	83.20	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00...	[more]

BLAST of Chy8G147500 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08200.1	6.42e-70	83.20	uncharacterized protein E5676_scaffold1503G00160 [Cucumis melo var. makuwa]	[more]
TYK21965.1	4.82e-68	86.40	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK00394.1	5.47e-68	85.60	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0057519.1	9.43e-68	83.20	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051313.1	2.75e-65	82.40	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of Chy8G147500 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G147500.1	Chy8G147500.1	mRNA