Chy8G146390 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCGCTTTTTCGTGCTTGATTTTAACGATCAAGCACTTACTAGATTTGTTGAGCATCAAATGCTCACATCTTTTAAAGAGTTCAGGGGCGACTGTCACAGGCATTTCAAACGGTACAACGATCTAGAACAGACACGTGCCAACCCACCTAACATATTGGTAGGACGTAGGGAAGATTGGCAGTTCCTGTGCGATCACTACATGAGCCGTGCATGTCAGGTGAGATCTACGAATTGTAATGATATGTGTTATTTCACTTAATATTCTTAACGCACGTTTGTACTTTTAACAAACATTTTCATGCAGGAGCAATCACGGACGAACAAGGCTGCTAGGCAGAAGCAGCCTTACAGTCATAGTAGTGGGTCGAAGTCGTTTCTACAACGACAACCTGACCTCGCTGAAGAACGAGGTCTACCAGTCGACCGACTGGAATTATTCAAAGAAACCCACGCATGTTAGTTTAAACTTGATTTTGTCTAAATTATGTCCTTATACTTCTCCAATTCATAACTTACATAAAATTTTATTTGTTGTAGAGTAAAATGCTGGAACTTCAATCTCAGCCTACCCCAGAGGGTTCTCAGCCACTCTCTG AGCGCTTTTTCGTGCTTGATTTTAACGATCAAGCACTTACTAGATTTGTTGAGCATCAAATGCTCACATCTTTTAAAGAGTTCAGGGGCGACTGTCACAGGCATTTCAAACGGTACAACGATCTAGAACAGACACGTGCCAACCCACCTAACATATTGGAGCAATCACGGACGAACAAGGCTGCTAGGCAGAAGCAGCCTTACAGTCATAGTAGTGGGTCGAAGTCGTTTCTACAACGACAACCTGACCTCGCTGAAGAACGAGGTCTACCAGTCGACCGACTGGAATTATTCAAAGAAACCCACGCATGTTAAGTAAAATGCTGGAACTTCAATCTCAGCCTACCCCAGAGGGTTCTCAGCCACTCTCTG AGCGCTTTTTCGTGCTTGATTTTAACGATCAAGCACTTACTAGATTTGTTGAGCATCAAATGCTCACATCTTTTAAAGAGTTCAGGGGCGACTGTCACAGGCATTTCAAACGGTACAACGATCTAGAACAGACACGTGCCAACCCACCTAACATATTGGAGCAATCACGGACGAACAAGGCTGCTAGGCAGAAGCAGCCTTACAGTCATAGTAGTGGGTCGAAGTCGTTTCTACAACGACAACCTGACCTCGCTGAAGAACGAGGTCTACCAGTCGACCGACTGGAATTATTCAAAGAAACCCACGCATGTTAAGTAAAATGCTGGAACTTCAATCTCAGCCTACCCCAGAGGGTTCTCAGCCACTCTCTG SAFSCLILTIKHLLDLLSIKCSHLLKSSGATVTGISNGTTI*NRHVPTHLTYWSNHGRTRLLGRSSLTVIVVGRSRFYNDNLTSLKNEVYQSTDWNYSKKPTHVK*NAGTSISAYPRGFSATLX Homology
BLAST of Chy8G146390 vs. ExPASy TrEMBL
Match: A0A5A7T1N6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002030 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.1e-15 Identity = 55/109 (50.46%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Chy8G146390 vs. ExPASy TrEMBL
Match: A0A5D3DIR3 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003130 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.2e-12 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Chy8G146390 vs. ExPASy TrEMBL
Match: A0A5A7SJB0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00210 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 5.1e-10 Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Chy8G146390 vs. ExPASy TrEMBL
Match: A0A5D3DTP7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2133G00270 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.7e-09 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Chy8G146390 vs. ExPASy TrEMBL
Match: A0A5A7VKG1 (Flocculation protein FLO1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00670 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.7e-08 Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Chy8G146390 vs. NCBI nr
Match: KAA0036833.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 6.11e-19 Identity = 55/109 (50.46%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Chy8G146390 vs. NCBI nr
Match: TYK23260.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 1.47e-15 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Chy8G146390 vs. NCBI nr
Match: KAA0026290.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK21486.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.19e-12 Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Chy8G146390 vs. NCBI nr
Match: KAA0058377.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26884.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 2.57e-11 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Chy8G146390 vs. NCBI nr
Match: TYJ96308.1 ((R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 6.90e-11 Identity = 34/59 (57.63%), Postives = 38/59 (64.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|