Chy8G146310 (gene) Cucumber (hystrix) v1

Overview
NameChy8G146310
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein MNN4-like
LocationchrH08: 924650 .. 925268 (+)
RNA-Seq ExpressionChy8G146310
SyntenyChy8G146310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGAAAATGAGATTGGACATGACATCTTAAAAAACCCAAGAGCTCAAGACTTAGAGAGTGCGTTGAAGAAAGTGGCTTGGCCGGAGACAAAGTTAGATATCATGCCAAAAGGAAAGTATCAGCTCCTCCCACACAATTTGAACACAGATGCTATAATCTGGCTAGTGTTTGTGAAGAAAAAGATCATGCCTACTCGCCATCACAGCACCATCTCGATGGAAAGAGTAATGTTGGTATACTGCATAATGAAGGAGATCCTGGTGAACATTGGCAAAATAATAAGCGAGCACATCATTGCATGGGTCAAGCATTATCACAGAGCAAGACCTTTTCCGCACTTAATTGAATAATTATGCTTAAGGGCATGCCGGCAAGAGAAATTTCCTCAGGTGGAGGTGAAAGATGGAATCTAGTCACTATCAAACCTTCACTGCATCATAGCCATTCACACAAACAATGCAAAGTCAAAACGCCTCAAAATCAAGGAAGGTTGTAAAGAGGTTGAAGAAGTACTGGATGACGTGATGACGTTGAAGAAAAAGATGAGAAAGATACTACCCCACTGAAACGCAAAAGCAAGACAAGGAGGAAGCTTTAAGATAGAAGAAAGGACTCTAA

mRNA sequence

AAGGAAAATGAGATTGGACATGACATCTTAAAAAACCCAAGAGCTCAAGACTTAGAGAGTGCGTTGAAGAAAGTGGCTTGGCCGGAGACAAAGTTAGATATCATGCCAAAAGGAAAGTATCAGCTCCTCCCACACAATTTGAACACAGATGCTATAATCTGGCTAGTGTTTGTGAAGAAAAAGATCATGCCTACTCGCCATCACAGCACCATCTCGATGGAAAGAGTAATGTTGGTATACTGCATAATGAAGGAGATCCTGGTGGAGGTGAAAGATGGAATCTAGTCACTATCAAACCTTCACTGCATCATAGCCATTCACACAAACAATGCAAAGTCAAAACGCCTCAAAATCAAGGAAGGTTGTAAAGAGGTTGAAGAAGTACTGGATGACGTGATGACGTTGAAGAAAAAGATGAGAAAGATACTACCCCACTGAAACGCAAAAGCAAGACAAGGAGGAAGCTTTAAGATAGAAGAAAGGACTCTAA

Coding sequence (CDS)

AAGGAAAATGAGATTGGACATGACATCTTAAAAAACCCAAGAGCTCAAGACTTAGAGAGTGCGTTGAAGAAAGTGGCTTGGCCGGAGACAAAGTTAGATATCATGCCAAAAGGAAAGTATCAGCTCCTCCCACACAATTTGAACACAGATGCTATAATCTGGCTAGTGTTTGTGAAGAAAAAGATCATGCCTACTCGCCATCACAGCACCATCTCGATGGAAAGAGTAATGTTGGTATACTGCATAATGAAGGAGATCCTGGTGGAGGTGAAAGATGGAATCTAGTCACTATCAAACCTTCACTGCATCATAGCCATTCACACAAACAATGCAAAGTCAAAACGCCTCAAAATCAAGGAAGGTTGTAAAGAGGTTGAAGAAGTACTGGATGACGTGATGACGTTGAAGAAAAAGATGAGAAAGATACTACCCCACTGAAACGCAAAAGCAAGACAAGGAGGAAGCTTTAAGATAGAAGAAAGGACTCTAA

Protein sequence

KENEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKIMPTRHHSTISMERVMLVYCIMKEILVEVKDGI*SLSNLHCIIAIHTNNAKSKRLKIKEGCKEVEEVLDDVMTLKKKMRKILPH*NAKARQGGSFKIEERTLX
Homology
BLAST of Chy8G146310 vs. ExPASy TrEMBL
Match: A0A0A0L2P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569710 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 125/143 (87.41%), Postives = 128/143 (89.51%), Query Frame = 0

Query: 2   ENEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKK 61
           ENEIGHDILKNPRAQDLESALKKV WPET LDI P GKYQLLPHNLNT+AIIWLVFVKKK
Sbjct: 2   ENEIGHDILKNPRAQDLESALKKVVWPETMLDITPTGKYQLLPHNLNTEAIIWLVFVKKK 61

Query: 62  IMPTRHHSTISMERVMLVYCIMKEILVEVKDGI*SLSNLHCIIAIHTNNAKSKRLKIKEG 121
           IMPTRH + ISMERVMLVYCIMKEILVEVKDGI SLS LHCIIAIHT N KSKRLKIKE 
Sbjct: 62  IMPTRHDNNISMERVMLVYCIMKEILVEVKDGIWSLSILHCIIAIHTKNVKSKRLKIKER 121

Query: 122 CKEVEEVLDDVMTLKKKMRKILP 145
           CKEVEEVLD +MTLK KMRK  P
Sbjct: 122 CKEVEEVLDGMMTLKNKMRKKYP 144

BLAST of Chy8G146310 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.3e-26
Identity = 61/87 (70.11%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 4   EIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKIM 63
           EI H I KNP+ +DLE ALK+VAWP TK DIMP GKYQL   NLNT+AIIWLVFVK  I 
Sbjct: 24  EIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIR 83

Query: 64  PTRHHSTISMERVMLVYCIMKEILVEV 91
           PTRH STISME +MLVYCIM+ +LV +
Sbjct: 84  PTRHDSTISMEHIMLVYCIMEHLLVNI 110

BLAST of Chy8G146310 vs. ExPASy TrEMBL
Match: A0A5D3D2B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001360 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 7.5e-25
Identity = 72/161 (44.72%), Postives = 84/161 (52.17%), Query Frame = 0

Query: 3   NEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKI 62
           NEIGH I KNP+ +DLE ALK+VAW  TK DI    +Y L  HNLN +  IWLVF KKKI
Sbjct: 37  NEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRYHLFLHNLNIEVSIWLVFEKKKI 96

Query: 63  MPTRHHSTISMERVMLVYCIMKEI------------------------------------ 120
           +PTRH   ISMER+MLVYCIM+EI                                    
Sbjct: 97  IPTRHDIAISMERIMLVYCIMEEIPMNIGEIISEHIIAWVKHLHGARPFSYLIEKFYLKA 156

BLAST of Chy8G146310 vs. ExPASy TrEMBL
Match: A0A5A7U670 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G00350 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22
Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0

Query: 3   NEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKI 62
           NEIGH I KN + +DLE  LK++AWPET+ DI+P  +  L PHNLNT+A IWLVFVKKK+
Sbjct: 54  NEIGHAIFKNLQERDLEDILKRIAWPETRWDILPT-RVSLFPHNLNTEANIWLVFVKKKM 113

Query: 63  MPTRHHSTISMERVMLVYCIMKEILVEVKDGI 95
           MPT H +TIS+ER++LVY IM+ +LV + + I
Sbjct: 114 MPTLHDNTISIERMVLVYDIMEHLLVNIGEKI 144

BLAST of Chy8G146310 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-21
Identity = 64/161 (39.75%), Postives = 85/161 (52.80%), Query Frame = 0

Query: 1   KENEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKK 60
           K NEIGH I +NP+A+DL+ AL+ + WP TK D MP  KYQL P++LNT+  +WLVF+KK
Sbjct: 99  KNNEIGHLIFENPKARDLQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKK 158

Query: 61  KIMPTRHHSTISMERVMLVY------------------------------CIMKEIL--- 120
            IMPTRH STISME +ML+Y                              C+ K++    
Sbjct: 159 NIMPTRHDSTISMEIIMLLYYNGDSNQFNEISCEHLIAWVKHPCGAKPFLCLTKQLYIKA 218

BLAST of Chy8G146310 vs. NCBI nr
Match: KGN54872.1 (hypothetical protein Csa_012255 [Cucumis sativus])

HSP 1 Score: 246 bits (627), Expect = 1.07e-80
Identity = 125/143 (87.41%), Postives = 128/143 (89.51%), Query Frame = 0

Query: 2   ENEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKK 61
           ENEIGHDILKNPRAQDLESALKKV WPET LDI P GKYQLLPHNLNT+AIIWLVFVKKK
Sbjct: 2   ENEIGHDILKNPRAQDLESALKKVVWPETMLDITPTGKYQLLPHNLNTEAIIWLVFVKKK 61

Query: 62  IMPTRHHSTISMERVMLVYCIMKEILVEVKDGI*SLSNLHCIIAIHTNNAKSKRLKIKEG 121
           IMPTRH + ISMERVMLVYCIMKEILVEVKDGI SLS LHCIIAIHT N KSKRLKIKE 
Sbjct: 62  IMPTRHDNNISMERVMLVYCIMKEILVEVKDGIWSLSILHCIIAIHTKNVKSKRLKIKER 121

Query: 122 CKEVEEVLDDVMTLKKKMRKILP 144
           CKEVEEVLD +MTLK KMRK  P
Sbjct: 122 CKEVEEVLDGMMTLKNKMRKKYP 144

BLAST of Chy8G146310 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (322), Expect = 1.62e-34
Identity = 61/89 (68.54%), Postives = 70/89 (78.65%), Query Frame = 0

Query: 4   EIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKIM 63
           EI H I KNP+ +DLE ALK+VAWP TK DIMP GKYQL   NLNT+AIIWLVFVK  I 
Sbjct: 24  EIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIR 83

Query: 64  PTRHHSTISMERVMLVYCIMKEILVEVKD 92
           PTRH STISME +MLVYCIM+ +LV + +
Sbjct: 84  PTRHDSTISMEHIMLVYCIMEHLLVNIVE 112

BLAST of Chy8G146310 vs. NCBI nr
Match: KAA0041933.1 (hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK17865.1 hypothetical protein E5676_scaffold306G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 1.59e-31
Identity = 72/161 (44.72%), Postives = 84/161 (52.17%), Query Frame = 0

Query: 3   NEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKI 62
           NEIGH I KNP+ +DLE ALK+VAW  TK DI    +Y L  HNLN +  IWLVF KKKI
Sbjct: 37  NEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRYHLFLHNLNIEVSIWLVFEKKKI 96

Query: 63  MPTRHHSTISMERVMLVYCIMKEI------------------------------------ 119
           +PTRH   ISMER+MLVYCIM+EI                                    
Sbjct: 97  IPTRHDIAISMERIMLVYCIMEEIPMNIGEIISEHIIAWVKHLHGARPFSYLIEKFYLKA 156

BLAST of Chy8G146310 vs. NCBI nr
Match: KAA0049837.1 (hypothetical protein E6C27_scaffold1591G00330 [Cucumis melo var. makuwa] >TYK08684.1 hypothetical protein E5676_scaffold118G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 1.28e-28
Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0

Query: 3   NEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKI 62
           NEIGH I KN + +DLE  LK++AWPET+ DI+P  +  L PHNLNT+A IWLVFVKKK+
Sbjct: 54  NEIGHAIFKNLQERDLEDILKRIAWPETRWDILPT-RVSLFPHNLNTEANIWLVFVKKKM 113

Query: 63  MPTRHHSTISMERVMLVYCIMKEILVEVKDGI 94
           MPT H +TIS+ER++LVY IM+ +LV + + I
Sbjct: 114 MPTLHDNTISIERMVLVYDIMEHLLVNIGEKI 144

BLAST of Chy8G146310 vs. NCBI nr
Match: TYK23866.1 (hypothetical protein E5676_scaffold419G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (278), Expect = 1.28e-27
Identity = 67/131 (51.15%), Postives = 80/131 (61.07%), Query Frame = 0

Query: 3   NEIGHDILKNPRAQDLESALKKVAWPETKLDIMPKGKYQLLPHNLNTDAIIWLVFVKKKI 62
           NE+GH I KN + QDLE A   VAW   K DI P GKYQL PH LNT+A I +VFVKKKI
Sbjct: 47  NELGHTIFKNLQEQDLEDASITVAWSGIKWDITPTGKYQLFPHKLNTEANILVVFVKKKI 106

Query: 63  MPTRHHSTISMERVMLVYCIMKEIL--VEVKDGI*SLSNLHCIIAIHTNNAKSKRLKIKE 122
           MPT H++T          C+  + L  V+VKD + S S LH II+I  N AK K LK K+
Sbjct: 107 MPTLHNNT----------CLTLDKLPQVDVKDRVYSSSILHHIISISKNRAKLKCLKTKQ 166

Query: 123 GCKEVEEVLDD 131
             K   E +DD
Sbjct: 167 DGKSEAEEVDD 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L2P02.0e-6287.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569710 PE=4 SV=1[more]
A0A5D3D7L32.3e-2670.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D2B57.5e-2544.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U6704.5e-2259.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CW171.0e-2139.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KGN54872.11.07e-8087.41hypothetical protein Csa_012255 [Cucumis sativus][more]
KAA0057652.11.62e-3468.54hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19... [more]
KAA0041933.11.59e-3144.72hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK1786... [more]
KAA0049837.11.28e-2859.78hypothetical protein E6C27_scaffold1591G00330 [Cucumis melo var. makuwa] >TYK086... [more]
TYK23866.11.28e-2751.15hypothetical protein E5676_scaffold419G00400 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G146310.1Chy8G146310.1mRNA