Chy7G145940 (gene) Cucumber (hystrix) v1

Overview
NameChy7G145940
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 21234102 .. 21241251 (-)
RNA-Seq ExpressionChy7G145940
SyntenyChy7G145940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAAGGTCGATTACCGATCGATACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGGTGATCTTTCATTGTTCATCTGCAATTCTAATTTTCTCATTAATTTTGATCCACTAACATAAACATCTACACGCTTGCCGTACTTTGAATGAAGCATAGACATTGAGAGAAGTCTCTAGTTTAAAAGCCTAAATGCGAATGCGATGTTCAATCTAGATAAAGAGTCTCTAGTTTAGGGAAAGCCTAAACCCTTCATTAGGAGTAAAGTTTGTTGTGACTTGCAAGTCTTGATAGTGTGTACTATATCAAATAAGTTCTTTTGTAATCATTTAACTCTATTAGTAAAGTATTTTTTATCAGACTCTCTGCCCCTGACGTAGGTGTGTTCTTTTTGTTGTATGGATATTTTTATTGTCTTGTTTTATATCATGTCAGTGACATCGGCCTGTGGATCATCCAGGCAGATTCTTTTTTTTTTTTTTTTCCGAAAGAGAAGGGAACTTTAATTGATGTAATGAAAAGGAACCAAGTCTTAAAGATACAAGGATCAAAATATAATGAAAGTGTAATAAGCACCTTAAGACTAGTTCTGGGCCTCTGTCAATACTGTTGGTGTCTTTACCTACCGGCTACAATCCTTTGTACAAACATTTAGCTTATTATCCTTCTCCAATCCTCTTCTCTAAACTTTGGAAGCAAAACATCTCATGAAAAAAGTTTGATTCTACTCCTAGCTCATAGGTTAGACTTTATTAGCAGAGCCTCTCCTTGGCTCCAATTAGTGTATTCTGTGAAAATGAGCTGAAAAGGATTTGAACTACCTTTTGTCGCTTCTCCATTTTCCTTTTTCCTTTTTCCTTTTAAAGGTATGGTATTGCTTTGGAAATCAATTGTATGTCCACGGTTCTGAGCTCAAGTATGCGAACAATGAGCTGTTTTCTATCCATTAAAGGATAAAAATTACTTATTTCGGACTTCGGAGGCTGGTTTTATTTGTTTAGTCTCCTAAAACATTTGATTGGAGAAAAACATGATAACCTTCTCAGGCATCAATAGTATTGGAATTTTATTTTTTAAAGATATCCATAAGTATTTGAGTTAGCTTGTACATTGTTGTGAAGACAACTTATAGGATATTAAATCTTAAAGGATATTAAATCTTAAATACACATTTATGACACATTTCCTCTAAATTAAATTGCTACTTATTGACCACTAGCTGGTCAGCCCAAGGTGGTTGAGAATATATATAAAATATTATATATATTATAACCTATGGACCTAGTTTGAGTCGAATATTAATTCAAAGTAAGAAGTTAGTGTTTGAACCTTGCAACATTGTTTGGGCCTACGTCGGACTTAATGAATCACAATGGTACAATACCAGTGGTATTTAAGCTCACATAAGGAGAGTGTTTAGAATACAAATGAAAGATCATAGTAGTGATATATAATTAAATTTGTCTTCAACCACTGGCTTAAGCTTTTGGGTGAATTGGTATTATAATATGGTATCAGAGCAAGTGGTCCGGGAAGTCCTGTGTTCAAGACCCTGCTTTGTCGTTTCCTCCCCAATTAAAATTGATTTTCACTTGTTGGATTTTTCAAATATTTCAAGCCTACAAGTGAGGGGAGGGTTGGTGATATATCACTAAATTTGCCTTCAACCACTAGTTTAAGCTTTTGGGTGAATTGATGGTTTAAAATATTATATTAATCTTGCCTAAGCTTTCTGGAGCTTAGTGTTAGTGAAGATCTACTGGACAGATTTGTTTCTTATTCCAGGCCTCTCCTTTGCTTGATGGTTAGGAATTATGCCTACTTGTAATATATATATATATATATCCAGTTTGTTTTGGGTGGGCTGGTTTTGCCTTAATTTTCCTTCTTTTTAAGACAACAAATCTGCACGAACCCAAAGGCTCAAACTCTGAAGATATCAAGGTATGTTAGGTACAACTGCAAAATTTATTTTAAATCGTGGATATTATACTATAGCCTTGAAAGAAAAAAATGCATTTACTCCAGTCAGTAATTACAGTACAGAAATAATAGTTTGTTATGTCTTAACAAATACATACATACACATATATATTAATTCCTTAGTGGCAATATATCCCTTTTTGTTCAAAAGTGACGTAAAGTCGGGCCTTACAAATAAATTAGTTAAAATCATTAGAATGTTCAACTCACCTATGCCACAAGTAATACTGTAAAGCTGACCATTTATTCTATGATTTCTAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAACTGCATTACTTGCAAGAATGTCACAGGTACTCAAACTCCTCCTGTACTTTATAATATACAAGGAGAAAAAAACCTAGTAATTAAAGCACAGAAATATTGATATGGCTTTTAAAAACTATATATATTCCTTTTTTTTTCTTATATCCATGAATGTCTGAGCTAGCTTATGCGCACCTCGACTAATCTCACAGAACAAGCTACCTAACCCTACAACATTTGAGTGCCAAGGAAACTCGTAGAAAATTAATTCATAGGTAGATGATCATCATGGATTGAACCCATGACCTCTTAGTTAGATATTGAGACTGTTTCCCTTTTCACTAATAGGCAAACCCATGATGGCTTAAAAAAACTATATTCAAACCCGAAAATTTCTCAAAGAGATCCTATTACTGAGGTTTCAGCCAGGACATTTGGTCTTACATCAACTAGCGAGCAAAAGCCAAATGTTCCTCTATTTTCACAGGTCATTCACAAGAAACCAAATTTTCTTGACATCTGGCGCCGAATATTAGATGAGGAACAAGAAAAATTTAAGAGTTAAGTTAGGAGTAAAAAGGCTGTTGCCAAAAGCAAAAAAGAGAAGCACAAATAAGGAGCTAAAGAGATAGGTGTTTCTTTTCCTATTAAGGGTCAAAATCATTTACTCAATTCAATGAATCGAGTAAATGATCAACAAGAAGCACCATAGAGATCAATAATTGCATGTGCCATTTCAATTAGGCATATAGAAGAACTGTTGCACATCCCAGCTAGAAATAGGACACACTTTAGGTACACCAGGATTATTTTATATTTGAATGTACGAGGAACAATAGAATTTTATAATCAGAATGTAAGTGTCAAAATAAAATTTTAAGAGAAATGAGAGAACTTGGAAGAAGTTTGGTCACTTGTTGGGTTCATACCTCTCTACAAGCCTCGGTGGGTATACATTTTTCGTAATAATCTTCTAACTTTTATTTTGCTTGATTAGGCTCCATGTTAGTTTTATTTGGCTCCTTCTGAAGGTTGAGTTCTGTTGAATTACCCCAGTACTTTTTCATTTTTCCTGAATGAAAGAATAGTTTCTCATTCTATACATGTGTAGCATGTTGGAAAATTGAAACAAGGCAAACAAGATCGATAAATTGAAAGGATCTTGTTGTGTGTTTGAATTGCCACCACACGCCGAAAAACCAAGTGAAGATCAAATGATCAAACATGTAGATTATCACACTCGCACAATATCGATTTTATGTGTGCACTGCCAAAATATAGCAACTAACTAGTCTAGAATGTTCTCGAAGTATTAAATATGTAAATTAATTTATAGAATTGAAAATTTCTAGAAATATCCTAGATTTTTTTAGGTTTAGGAATTCTCCTTTAGATAAGGATGAAATAAAAAATATCTAGAATAGTTAGAATTTTAGAGAAATCCTTTTGTAGAGGATTTCATGACTATAAATAAGAGGTGTGATCCTCATTTGTGAAACAAGCAAGCAAAACAAGTAAAGAGAGGAAGAAAGAAAGCAAGAGAGTTAGAGAGAAATATTGAGTGAAAAGTGAGTTAGTGTTTTGAGAGCAATGAGAGTGTTCTCTCCAAAAGTGTCCATCTCCGTAAACTTTCATAATAAAAGTTTCTTTATTCCGAGGGAGTGTTGTTGGAACTCAATTTTCCAACAAGATTGTTTAGAATATGCGATCACTATATTGATAGTATTGGGGATTACAATATAGAAATCGAATTGAATATAAAGATCAATTCGATGAAACAAACAAAAAATAAACTCTCACTCTGTTATTCTCTCTTTCAAAAATATACAGAAATGATTTCCTCCACAAAATACTCAATACCCAATCTCTCTCTTCCACTTCTTATTTATATTCTCCCTCCCACTCAGTGGGGTCCCCTCCTAGTCAGTTACATGTTAACTAACTCACTCTCCCGCCTATTTTCTATTTTATTTCTTTTCCTACTATACTGGTGGATTATTGGTGGTCTAACAAGTGTCTCTTCCTTTTGTGCCAATTTCTTTAACATACACAAACATGTGATAGACCATTTAACCCAAGAGTAGAATGAATGGTAAAACAATGGTACAGAGCAGGATGATGATGAATCAATGCTTGATTGAAAATAAAAAAAAAGAATCAAATACGTTCGCGTGTAGGAAGAACTAAACTGACAGGTTTAGGAGTGTCTTTTATCTAGTTTGGCACTTTTCGGTTGGGATCAACACAGGGGAAGAGGGTGGAGAGGGAGCTCTGGACTCTCAAACTTCCTGGGCAGTCCATAGCTTGAAGCTGTATTTCAACTGGAATTGGCAATTTCACAATGTTCTTGGCTTTACTTTTTTTCTCTTCATAAAAAATCAATAGACTCATATTAAACAGAAGAGAGAGAATCACAGCCAAAGGGCCTCGGGGTAGACGGGTCCTTAAGCCAAAGAATGGAGGATCAAAAGAGTAAGGGTCTCCAATCTAAAAGAATGAGAGCATGCCATGTGTTCAAGAAAAACTATACATAACATTCCAAGAGGAGGCAGTGAATTGTACATTTTCACAAAAAATAAAAATGGAAAACAAGGGAAGTTGTTGATGATATATATTTAAATTTGCCTTCAACCACTAGCTTAAGCTTTTAGGTGAATTTGCTGTTTAATATGGTATCAGAGCAGGTGGTCCAGGGAGATCCTGTATTCAAGCCCCTGCATTGTCATTTCCTGTCCAATTAAAATTGATTTCTACTTGTTGGGCCTTTCAAATATTTCAAGCCCACAAGTGAGGTAAAATTGATTGATTTCCACTTGTTGGGTTTTTCAAATATTTCAAGCCCACAAGTGAGGGGAGTGTTGTGATATATATTTAAATTTGCCTTCAACCATTAACTTAAGCTTTTGGATGAATTCGCAGTTTAATAGAAGTAAATGTCTTACCTAAGAAAAACCTTCTATTTCTTTCCTTCCAAAGAGCCTAGAGGAAAGCTCTACAAGCATTACTCCACAAGATTCTAGCCTATCTTTGAATCACCATACAGATAATTATTTCTTCAAAGTTTAAATTGATACAAATAATTGATATCCTAAAATTAATGGTATGAAGGAGAGATAAAGGTTGATTCCAAATCAAATGGCATCAGACAATCCACGGTGAATCAAAAAAGATTAAAAAACTTTTTTACCATTTTCTCAAAAGTGAGACCCCACCAAGGTTAAACCCGACTATAGTTCATGAAAAGGCCGATAAGTTCTTCGTCAATGCTCGACCTCATGAATCTTCTCAATATGAAAAGGGCTATCAATATTAGAAGGCTCTAAATCCCCATTCAACACTCAGTGCTAGAAATAACTTTACATGGTAAGTGGTAACTTCAAAATATAGTTTAAGCATGAGTTGTAGAAATCACACATTCCTTGGTTCTTTAAGATTAGACTGATAATTAGGTTATCCTGATAAAAGGTGTACTTAATATTTGACTAACACCTTAAGTTGCATCCATGCTCTATACCATAATCAAGGCATGCTCATGACTGAGATAAAATAAAATAATTCAAATCTGAATTGATCAGGATGATAATATAATTCTAGTTTACACAAATATGCAAAGGAGTTCATAATATATCCAGGCTTCTATATTCGTAGACAACTGATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTAGAAAACCAATTGGAAATGAGTTTGAAAGGCGTCCGTGTGAAGAAGGTAAAAACTATGAAGAGACCGCAATAAAAACATACAACTGATAAAGCATATTGTATGTGGATGTTTATGTGTTCTTGTATTTTTCTTGCAGGAAAAGACTTTAAGTGATGAAATTACTGAACTAAAACAGAAGGTTTACCCCTCTGTAAACATCCACGTATCTCATGATATCAAGAAGTGCTGAAACAACATCTAATTTGCAGTAATTATGTTGCAGGGGAACCATATGCATCAAGAAAATGTGGAACTCTACAAAAAATTAGATATGACTCGTAAGGAAAATGCAGAACTGCAAATGAAGGTAGAGATCCAAAACTTATGTTGAAATGCTTCATCTCTTACTTTATTATTTTTGGGTAAAAAATCAAACTTTCATTATTGAAAAAAATTAAAGAATATACAATGGCATACAAGGAAAACAAGTCCACACACAAAACAAGTAGTAAAATCACACTAACAAAAACCTCCTAAGATCTCTCAACCTCCCTGTTCTGCTATTTCTCTTGAGTTAAATCTCCCCACAACATGGAAAAGAAACAAGATTACCACAAAACTTTTGTTTTATACCAAAATGAGATAACAAAATGAGGGACTCAAGTCTCATCCTCAATCACGGTGCCACACTCTCTACCATGAGCCAAACATTATTGAATTGCTTCATTGTTAACTCGTTTAAAATGTACTCTTTCTTAGTTGTATGAATTCAGAAGTTATTCTTACCGCTTATTTTTAACCAATCAAGATTTTTTTATTGAAATGACAACTTTTATTGGGAACTTTGGGGTTTCTTCCATGCACCATTTTTTCTTTCTTCCCTGTCTCTTTTCTTTCATATTTTTACATTTTTTGTTTCTAAGAGTGGGACAGGAAGAGGCGGATTGCTGACCCTGAAAAGGGACTCTTCCTTCCTGTTAATTAGCTTGACTGTGCGGTTTTTTAAGTACCAGGCCTATGGACCAATGGAAATAGATAAAACAAGCAGTAGCTCTCAACAATTCGCTATCACCAATAGATACAGTATGCCTGCTCTACAGCTAAGACAGCCACAACCGCAAAACAATGAAACACCAATACCAGGAATAAAGCTGGGGTATGTTCTAGCAATCTGTGTTCATGAAACATGA

mRNA sequence

CATAAGGTCGATTACCGATCGATACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAACTGCATTACTTGCAAGAATGTCACAGACAACTGATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTAGAAAACCAATTGGAAATGAGTTTGAAAGGCGTCCGTGTGAAGAAGGAAAAGACTTTAAGTGATGAAATTACTGAACTAAAACAGAAGGGGAACCATATGCATCAAGAAAATGTGGAACTCTACAAAAAATTAGATATGACTCGTAAGGAAAATGCAGAACTGCAAATGAAGGCCTATGGACCAATGGAAATAGATAAAACAAGCAGTAGCTCTCAACAATTCGCTATCACCAATAGATACAGTATGCCTGCTCTACAGCTAAGACAGCCACAACCGCAAAACAATGAAACACCAATACCAGGAATAAAGCTGGGGTATGTTCTAGCAATCTGTGTTCATGAAACATGA

Coding sequence (CDS)

CATAAGGTCGATTACCGATCGATACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAACTCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGCTTTGAAGCAACAACTGCATTACTTGCAAGAATGTCACAGACAACTGATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTAGAAAACCAATTGGAAATGAGTTTGAAAGGCGTCCGTGTGAAGAAGGAAAAGACTTTAAGTGATGAAATTACTGAACTAAAACAGAAGGGGAACCATATGCATCAAGAAAATGTGGAACTCTACAAAAAATTAGATATGACTCGTAAGGAAAATGCAGAACTGCAAATGAAGGCCTATGGACCAATGGAAATAGATAAAACAAGCAGTAGCTCTCAACAATTCGCTATCACCAATAGATACAGTATGCCTGCTCTACAGCTAAGACAGCCACAACCGCAAAACAATGAAACACCAATACCAGGAATAAAGCTGGGGTATGTTCTAGCAATCTGTGTTCATGAAACATGA

Protein sequence

HKVDYRSIQQDERGAKSADELCFRTPVLEKRGSCFEATTALLARMSQTTDG*RTIWPECQRSTKSRKPIGNEFERRPCEEGKDFK**NY*TKTEGEPYASRKCGTLQKIRYDS*GKCRTANEGLWTNGNR*NKQ*LSTIRYHQ*IQYACSTAKTATTAKQ*NTNTRNKAGVCSSNLCS*NMX
Homology
[Close]
BLAST of Chy7G145940 vs. ExPASy TrEMBL
Match: A0A498K508 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037950 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 1   HKVDYRSIQQDERGAKSADELCFRTPVLEKRGSCFEATTALLARMSQ 48
           H+++YRS QQ ERGA S  E CFRT VL K GS  EAT A+L RMSQ
Sbjct: 136 HEINYRSFQQTERGAPSTAESCFRTQVLAKGGSKLEATIAVLGRMSQ 182

[Close]
BLAST of Chy7G145940 vs. NCBI nr
Match: RXI00402.1 (hypothetical protein DVH24_037950 [Malus domestica])

HSP 1 Score: 60.8 bits (146), Expect = 2.96e-07
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 1   HKVDYRSIQQDERGAKSADELCFRTPVLEKRGSCFEATTALLARMSQ 47
           H+++YRS QQ ERGA S  E CFRT VL K GS  EAT A+L RMSQ
Sbjct: 136 HEINYRSFQQTERGAPSTAESCFRTQVLAKGGSKLEATIAVLGRMSQ 182

[Close]
BLAST of Chy7G145940 vs. NCBI nr
Match: KAG6762529.1 (hypothetical protein POTOM_033037 [Populus tomentosa])

HSP 1 Score: 60.5 bits (145), Expect = 3.95e-07
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 22  CFRTPVLEKRGSCFEATTALLARMSQTTDG*RTIWPECQRSTKSRKPIGNEFERR 76
           C    VL K GS  E  TA+LARM    DG RT+W E Q ST+SRKP G+EFERR
Sbjct: 52  CVLHLVLAKGGSKLEEGTAILARMPSAIDGRRTVWFERQGSTESRKPAGDEFERR 106

The following BLAST results are available for this feature:
BLAST of Chy7G145940 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G145940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A498K5081.1e-0563.83Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037950 PE=4 SV=1[more]
BLAST of Chy7G145940 vs. NCBI nr
Match NameE-valueIdentityDescription
RXI00402.12.96e-0763.83hypothetical protein DVH24_037950 [Malus domestica][more]
KAG6762529.13.95e-0758.18hypothetical protein POTOM_033037 [Populus tomentosa][more]
BLAST of Chy7G145940 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G145940.1Chy7G145940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding