Chy7G145910 (gene) Cucumber (hystrix) v1

Overview
NameChy7G145910
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 21212969 .. 21213535 (-)
RNA-Seq ExpressionChy7G145910
SyntenyChy7G145910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAACAACAATCAGGAGCTCCAAAAGATTGTCATAGCAATCTATATGACTATCAAGAGTTTAAGTCTATGATTGGTCATCTCAACAAAGCCACTCATTTCAGTCCCAGTGTTTTATCTAACCATCTTATCAATTCGCCATTTTATCGTCAACGTTTGAATGAAATTTACAAAAACAGTATTGGATCAACTAAGAAGATCATGTGGTATGAAACAGGTGATTATTTCATTACATTTTCTTGAAGTTTCAACTCGTATAAACATTTGAGGTCAAAATTAAGTTTCAACCATATATAATTTGCATGATCGATTTCTTCCTAAAAGTTGAAGGTTTGTTCCTGCTCTATCACACTTGAAGTAAAAAAGTACATAAATATTAGATGAAATGCATATATTTTAACTAATCAATCGCTATATTTAGGTCGACAAAAAAGAAATATTGAGACCTCGAAACGAAGAACAAAACAAAGGGAGATGATATCAAATGCATCACTTGCTGGGAGGCTATGGAAGCAAATCAAAGTAGGGCTAATGGGCATTCTTCCAAAGAAAGATGTTAAGTAA

mRNA sequence

ATGGAAGAACAACAATCAGGAGCTCCAAAAGATTGTCATAGCAATCTATATGACTATCAAGAGTTTAAGTCTATGATTGGTCATCTCAACAAAGCCACTCATTTCAGTCCCAGTGTTTTATCTAACCATCTTATCAATTCGCCATTTTATCGTCAACGTTTGAATGAAATTTACAAAAACAGTATTGGATCAACTAAGAAGATCATGTGGTATGAAACAGGTCGACAAAAAAGAAATATTGAGACCTCGAAACGAAGAACAAAACAAAGGGAGATGATATCAAATGCATCACTTGCTGGGAGGCTATGGAAGCAAATCAAAGTAGGGCTAATGGGCATTCTTCCAAAGAAAGATGTTAAGTAA

Coding sequence (CDS)

ATGGAAGAACAACAATCAGGAGCTCCAAAAGATTGTCATAGCAATCTATATGACTATCAAGAGTTTAAGTCTATGATTGGTCATCTCAACAAAGCCACTCATTTCAGTCCCAGTGTTTTATCTAACCATCTTATCAATTCGCCATTTTATCGTCAACGTTTGAATGAAATTTACAAAAACAGTATTGGATCAACTAAGAAGATCATGTGGTATGAAACAGGTCGACAAAAAAGAAATATTGAGACCTCGAAACGAAGAACAAAACAAAGGGAGATGATATCAAATGCATCACTTGCTGGGAGGCTATGGAAGCAAATCAAAGTAGGGCTAATGGGCATTCTTCCAAAGAAAGATGTTAAGTAA

Protein sequence

MEEQQSGAPKDCHSNLYDYQEFKSMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKNSIGSTKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLMGILPKKDVK*
Homology
BLAST of Chy7G145910 vs. ExPASy TrEMBL
Match: A0A0A0KW83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MEEQQSGAPKDCHSNLYDYQEFKSMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60
           MEEQQSGAPKDCHSNLYDYQEFK+MIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN
Sbjct: 1   MEEQQSGAPKDCHSNLYDYQEFKAMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60

Query: 61  SIGSTKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLMGILPKKDVK 120
           SIGSTKKIMWYETGRQK NIETSKRRTKQR MISNASLAGRLWKQIKVGLMGILPKKD+K
Sbjct: 61  SIGSTKKIMWYETGRQKGNIETSKRRTKQRGMISNASLAGRLWKQIKVGLMGILPKKDLK 120

BLAST of Chy7G145910 vs. ExPASy TrEMBL
Match: A0A067K525 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11697 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 0

Query: 8   APKDCHSNLYDYQEFKSMIGHLNKATH----FSPSVLSNHLINSPFYRQRLNEIYKNSIG 67
           +P+   S LYD  E +++   LNKA       SP+++S   + SPFY QRL+ IYK +  
Sbjct: 38  SPRHNGSTLYDSFELRAVTNQLNKAIQSLNCSSPTLMS--YLKSPFYGQRLDSIYKENAK 97

Query: 68  STKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLMGILPKKD 119
           + KKIM  +  R  R+I+    RT      +   L  RLWK++K GL+    + D
Sbjct: 98  TPKKIMGSQLAR--RSIDKRASRT------AGGGLMSRLWKKVKQGLLWSKQRND 142

BLAST of Chy7G145910 vs. ExPASy TrEMBL
Match: B9RLR6 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1470430 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 0

Query: 9   PKDCHSNLYDYQEFKSMIGHLNKA----THFSPSVLSNHLINSPFYRQRLNEIYKNSIGS 68
           P+   S LYD  EF+++   LNKA       SP+ +S   + SPFY  RL+ IYK +  +
Sbjct: 39  PRHNGSTLYDSYEFRAVTEQLNKAMQSLNSSSPTFMS--YLKSPFYSHRLDSIYKENSET 98

Query: 69  TKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLM 112
            K+IM     ++     + K+ +++   + +   A RLWK+IK GL+
Sbjct: 99  QKRIMCSRINQR----YSDKKASRKGSRVMSGGFASRLWKKIKEGLL 139

BLAST of Chy7G145910 vs. ExPASy TrEMBL
Match: A0A7J6HC11 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003045 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0

Query: 14  SNLYDYQEFKSMIGHLNKATH----FSPSVLSNHLINSPFYRQRLNEIYKNSIGSTKKIM 73
           S LYD  E  +++  LNKA      FSP  + N   NSPFYR+R N+IYK +  S+KK+ 
Sbjct: 47  STLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNP--NSPFYRKRQNQIYKENKESSKKLT 106

Query: 74  WYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLM 112
                     ++ SK R  +   +    +  RLWK++K GL+
Sbjct: 107 LSNLS-SASILDGSKSRYSRGAWVVTREVVTRLWKKVKQGLL 145

BLAST of Chy7G145910 vs. ExPASy TrEMBL
Match: A0A803P9L1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0

Query: 14  SNLYDYQEFKSMIGHLNKATH----FSPSVLSNHLINSPFYRQRLNEIYKNSIGSTKKIM 73
           S LYD  E  +++  LNKA      FSP  + N   NSPFYR+R N+IYK +  S+KK+ 
Sbjct: 47  STLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNP--NSPFYRKRQNQIYKENKESSKKLT 106

Query: 74  WYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLM 112
                     ++ SK R  +   +    +  RLWK++K GL+
Sbjct: 107 LSNLS-SASILDGSKSRYSRGAWVVTREVVTRLWKKVKQGLL 145

BLAST of Chy7G145910 vs. NCBI nr
Match: KGN53885.1 (hypothetical protein Csa_011823 [Cucumis sativus])

HSP 1 Score: 234 bits (596), Expect = 2.45e-77
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MEEQQSGAPKDCHSNLYDYQEFKSMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60
           MEEQQSGAPKDCHSNLYDYQEFK+MIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN
Sbjct: 1   MEEQQSGAPKDCHSNLYDYQEFKAMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60

Query: 61  SIGSTKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLMGILPKKDVK 120
           SIGSTKKIMWYETGRQK NIETSKRRTKQR MISNASLAGRLWKQIKVGLMGILPKKD+K
Sbjct: 61  SIGSTKKIMWYETGRQKGNIETSKRRTKQRGMISNASLAGRLWKQIKVGLMGILPKKDLK 120

BLAST of Chy7G145910 vs. NCBI nr
Match: KDP31321.1 (hypothetical protein JCGZ_11697 [Jatropha curcas])

HSP 1 Score: 57.8 bits (138), Expect = 1.33e-07
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 0

Query: 8   APKDCHSNLYDYQEFKSMIGHLNKATHF----SPSVLSNHLINSPFYRQRLNEIYKNSIG 67
           +P+   S LYD  E +++   LNKA       SP+++S   + SPFY QRL+ IYK +  
Sbjct: 38  SPRHNGSTLYDSFELRAVTNQLNKAIQSLNCSSPTLMS--YLKSPFYGQRLDSIYKENAK 97

Query: 68  STKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLMGILPKKD 118
           + KKIM  +  R  R+I+    RT      +   L  RLWK++K GL+    + D
Sbjct: 98  TPKKIMGSQLAR--RSIDKRASRT------AGGGLMSRLWKKVKQGLLWSKQRND 142

BLAST of Chy7G145910 vs. NCBI nr
Match: EEF47791.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 55.1 bits (131), Expect = 1.40e-06
Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 8   APKDCHSNLYDYQEFKSMIGHLNKATHF----SPSVLSNHLINSPFYRQRLNEIYKNSIG 67
            P+   S LYD  EF+++   LNKA       SP+ +S   + SPFY  RL+ IYK +  
Sbjct: 38  TPRHNGSTLYDSYEFRAVTEQLNKAMQSLNSSSPTFMS--YLKSPFYSHRLDSIYKENSE 97

Query: 68  STKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLM 111
           + K+IM     ++     + K+ +++   + +   A RLWK+IK GL+
Sbjct: 98  TQKRIMCSRINQR----YSDKKASRKGSRVMSGGFASRLWKKIKEGLL 139

BLAST of Chy7G145910 vs. NCBI nr
Match: KAF4392625.1 (hypothetical protein F8388_003045 [Cannabis sativa])

HSP 1 Score: 53.9 bits (128), Expect = 4.59e-06
Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 0

Query: 8   APKDCHSNLYDYQEFKSMIGHLNKATH----FSPSVLSNHLINSPFYRQRLNEIYKNSIG 67
           +P    S LYD  E  +++  LNKA      FSP  + N   NSPFYR+R N+IYK +  
Sbjct: 41  SPNYKGSTLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNP--NSPFYRKRQNQIYKENKE 100

Query: 68  STKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLM 111
           S+KK+           ++ SK R  +   +    +  RLWK++K GL+
Sbjct: 101 SSKKLTLSNLSSASI-LDGSKSRYSRGAWVVTREVVTRLWKKVKQGLL 145

BLAST of Chy7G145910 vs. NCBI nr
Match: KAF4403081.1 (hypothetical protein G4B88_027852 [Cannabis sativa])

HSP 1 Score: 53.1 bits (126), Expect = 8.98e-06
Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 0

Query: 8   APKDCHSNLYDYQEFKSMIGHLNKATH----FSPSVLSNHLINSPFYRQRLNEIYKNSIG 67
           +P    S LYD  E  +++  LNKA      FSP  + N   NSPFYR+R N+IYK +  
Sbjct: 41  SPNYKGSTLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNP--NSPFYRKRHNQIYKENKE 100

Query: 68  STKKIMWYETGRQKRNIETSKRRTKQREMISNASLAGRLWKQIKVGLM 111
           S+KK+           ++ SK R  +   +    +  RLWK++K GL+
Sbjct: 101 SSKKLTLSNLSSASI-LDGSKSRYSRGAWVVTRGVMTRLWKKVKQGLL 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KW831.0e-5896.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1[more]
A0A067K5251.7e-0535.65Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11697 PE=4 SV=1[more]
B9RLR61.1e-0433.64Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1470430 PE=4 SV=1[more]
A0A7J6HC112.4e-0436.27Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003045 PE=4 SV=1[more]
A0A803P9L12.4e-0436.27Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN53885.12.45e-7796.67hypothetical protein Csa_011823 [Cucumis sativus][more]
KDP31321.11.33e-0735.65hypothetical protein JCGZ_11697 [Jatropha curcas][more]
EEF47791.11.40e-0633.33conserved hypothetical protein [Ricinus communis][more]
KAF4392625.14.59e-0635.19hypothetical protein F8388_003045 [Cannabis sativa][more]
KAF4403081.18.98e-0635.19hypothetical protein G4B88_027852 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G145910.1Chy7G145910.1mRNA