Chy7G145100 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G145100
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	phytochrome A-associated F-box protein
Location	chrH07: 20675722 .. 20679129 (+)
RNA-Seq Expression	Chy7G145100
Synteny	Chy7G145100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGGGTAAACGTAAAACATTGTGAAGTTTATGCCTCAAATTCTAAATTTTTAGTTCTTCATATATCAGCCTGACTGGGAGTTAGTTCATTGGTTTAGGTAATTGTTATCCTCCCTTCTTCAAAATTATTTACATTATCCTAAGTTAGGAGTTTTTCCACTTATGATTGACAAACCTAATCCCAGAATTAATCTCTTTTTTTATATTGCAGCTTACCTAACCCAACTTAAATTCAAATCTACTTGTAGTTACCTTCAAATTACCTTCAAATCTTCAATCATAAGTTTGGAGAGTCCATACATAGGTGTTAATGTTAATGTAGAACGAATTAAAGGCTTGCAGACATTATTGAATAAACTTGTGTAAAATATAGTTTTATATTTTAGAAATGACATTTGAAAGTTGAAATTGAACAAAAAAATGAAATTTAAAGCAAAACTAAAATTAGTATGATATGAGAAATTGAGACATATCACATCAGAAAGTTGATCAATGAGTTGGAAATATGGAGGGGATAAGATTTGCAGAAATTTGAAAGATTTAAATGGGGAATAGTCTTAGCTTTGAAACTGTGACAAAAATGAAAGGTGTTTGTCAAGATAAAGAAACAACCTCAACACTCACAAGAGATTCCTTTCTTATCAATGGAGTGAAGTGAATGTGTGTTTGGCCAATGCCTTTTCACTTCTCTTATACATAGCCATCTTATCAATCAAAACATGGATTGCAAACACTCATCTCCACCACTTCTTTTTGTTGCCTTTGCTTCTTTAATATTCTCTTATTTTTCTTTTTACACAATCAAACTAAAACTACAAAAAGAGAGCTAGATCGTAAAACGTGTTGATCGCCGGGCGTTGTTCTTTGTTGTAAAAATAAAATACCTTTACCCTTTAGAAAGTTGTAATATTATCTTTAGCTTTTTATAAACATTTTGAAACTATTGTTGGAGTGAACTTTTTTATAATTCTAAACGAGATGATAAGCAAATGATTGGTAGTTTAGCTTAAATATTAAATGATTTAAGTTTTCAATACATAGTGAAGAATGATAACTATCCGTGCATCTAAAAACACGTTTTCATCCAAATTTTCACGATGCTAGAAATTCATATACATTCGTATCTTTAATGAATTATGTATTTACATTTATGGTGGTAGTTGAATGATTTTTTTTTAAATGTTGAAATTAGACCATTTAGATGAAAGATTGTGTCCTTTCAAGTGTCTTTTTAATTAGTTTAAATAGAGTTGTAATTCCAAAAACAAGACTTTGAATTTGAATGAAATTTCTTAGACTTTATTCTTTCTTTGTATTCTCATGTTTAGAATGTATGTTCAAGATGTTCAATCAAGTTTGATCAATTAGATTGTGGAAAGTTCAAAATTTTGAAGTTAAGAACAAGTTCTTCTTTGATATAATAAATCTTTCAAACCAAATATCTTTAGTTTTCATCAAGTTGCTTACCAATTAGTTAACTAAGGTTATTCTTATTATTGTTGTGGAAATTCACCTAATATAAGAAAGTTCTCGTATGTGATTATGATAATTCCATTTATCACGAGAGTTGAAACACGGAATAATGTGGCACCGGTTTTGAACAAACATTGTTTCAAAGGTTGTTCAAAATTTTACTTCTAGTAGTACCGTTGTTATTTATAGACAATTTTATAATTTAGCCCAAAAAAAACTAATCTTGAGTTAAAATATTAATTTATTCAGTTCAATAGTTTAAAAATTGACCAATTAAAATAGATATACTAAAATAGTTTTTTAATATTAAACTTTAGACCTCAAATAAAATAAAAGAAAACAAAATAGAATAAAAGTAAAATAGAAGCTTTAAATGGTGAATATACTTTTTTTAGGTTTAAATATAGAATTGATTGAAGTATATATTTGGTCTAAGTATTTTCAATGTTTGTTATTAATTTTGAGATCACTTTTTGAAAGACTTAAAAGTGATTTTAGATTAGGAATTTATTATAAACACATAAACACTATTTATTTAATTATTATTATTATTTTGGATGGTATTTGAAATATAATAAAAGAAATGAAAATATTTGATAAAAGTATTTAGAATTGAAGAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGGAAAAAGGAAAAAGGAAAAAGGAAAAAGTGACAGTTGGGAAAGGAAATAATTGGGGGAATTGGCTGGTGTTTTTATGATGCAAAGTTGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGGACACAACGACGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCGTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCGACTAAATTCTCCTCCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCCATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTCGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGGACCCTTCGTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAGAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCCAAGAGGAGGAAGATCTGTAGGTCTATGAGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTAAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

mRNA sequence

ATGGCAGAGGGTAAACCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAGAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCCAAGAGGAGGAAGATCTGTAGGTCTATGAGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTAAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

Coding sequence (CDS)

ATGGCAGAGGGTAAACCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAGAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCCAAGAGGAGGAAGATCTGTAGGTCTATGAGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTAAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

Protein sequence

MAEGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT*

Homology

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BLAST of Chy7G145100 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2)

HSP 1 Score: 271.6 bits (693), Expect = 6.3e-72
Identity = 123/167 (73.65%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 6   PPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSR 65
           P D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQGNKLL SR
Sbjct: 172 PEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASR 231

Query: 66  FRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFCSC 125
           FRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C
Sbjct: 232 FRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLC 291

Query: 126 KETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
            ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 292 DETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of Chy7G145100 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.4e-07
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 54  SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KD 113
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K 
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 182

Query: 114 GNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYHDDGEPVVRAYVCENGHVSGA 170
              +  ++ C +C  K  W +  A       C+ R+  Y D     +  +VC NGH+ G 
Sbjct: 183 VPFHPSEV-CPYCKAK-LWSMLQAKIIPQSACI-RLEAYED----CIEYFVCLNGHLLGI 239

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BLAST of Chy7G145100 vs. ExPASy TrEMBL
Match: A0A0A0KWJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.1e-98
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 166 DSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 225

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 226 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 285

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 286 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 334

[Close]

BLAST of Chy7G145100 vs. ExPASy TrEMBL
Match: A0A5D3E0Q4 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001020 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.2e-97
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 165 DSEAPDVLDPQIGSTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 224

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 225 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 284

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 285 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of Chy7G145100 vs. ExPASy TrEMBL
Match: A0A5A7TSM0 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001020 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.2e-97
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 165 DSEAPDVLDPQIGSTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 224

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 225 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 284

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 285 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of Chy7G145100 vs. ExPASy TrEMBL
Match: A0A1S4DZU2 (phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.2e-97
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 165 DSEAPDVLDPQIGSTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 224

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 225 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 284

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 285 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of Chy7G145100 vs. ExPASy TrEMBL
Match: A0A6J1DLZ5 (phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.4e-92
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDV DPQIG+TKVEKGVFM DREF  SKRRKI RSMRSHLASGVWNLSREQGNKLL
Sbjct: 204 DSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLL 263

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFC
Sbjct: 264 RSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFC 323

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
           SC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 324 SCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 372

[Close]

BLAST of Chy7G145100 vs. NCBI nr
Match: XP_011652932.1 (phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypothetical protein Csa_014680 [Cucumis sativus])

HSP 1 Score: 362 bits (929), Expect = 2.50e-123
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 211 DSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 270

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 271 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 330

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 171
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 331 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379

[Close]

BLAST of Chy7G145100 vs. NCBI nr
Match: KAA0044375.1 (phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (924), Expect = 3.06e-123
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 165 DSEAPDVLDPQIGSTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 224

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 225 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 284

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 171
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 285 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of Chy7G145100 vs. NCBI nr
Match: XP_016901491.1 (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (924), Expect = 3.06e-123
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIGSTKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 165 DSEAPDVLDPQIGSTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 224

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC
Sbjct: 225 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 284

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 171
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 285 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of Chy7G145100 vs. NCBI nr
Match: XP_038905727.1 (phytochrome A-associated F-box protein [Benincasa hispida])

HSP 1 Score: 355 bits (911), Expect = 3.33e-121
Identity = 161/169 (95.27%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDVLDPQIG TKVEKGVFMTD++FCVSKRRKICRSMRSHLASGVWNLSREQGNKLL
Sbjct: 169 DSEAPDVLDPQIGVTKVEKGVFMTDKDFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 228

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNR KIDLNCAFC
Sbjct: 229 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRKKIDLNCAFC 288

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 171
           SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 289 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 337

[Close]

BLAST of Chy7G145100 vs. NCBI nr
Match: XP_022155270.1 (phytochrome A-associated F-box protein isoform X1 [Momordica charantia])

HSP 1 Score: 341 bits (874), Expect = 4.48e-115
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 3   EGKPPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 62
           + + PDV DPQIG+TKVEKGVFM DREF  SKRRKI RSMRSHLASGVWNLSREQGNKLL
Sbjct: 204 DSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLL 263

Query: 63  RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 122
           RSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFC
Sbjct: 264 RSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFC 323

Query: 123 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 171
           SC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 324 SCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 372

[Close]

BLAST of Chy7G145100 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein )

HSP 1 Score: 271.6 bits (693), Expect = 4.5e-73
Identity = 123/167 (73.65%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 6   PPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSR 65
           P D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQGNKLL SR
Sbjct: 172 PEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASR 231

Query: 66  FRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFCSC 125
           FRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C
Sbjct: 232 FRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLC 291

Query: 126 KETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 172
            ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 292 DETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of Chy7G145100 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 )

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-08
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 54  SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KD 113
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K 
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 182

Query: 114 GNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYHDDGEPVVRAYVCENGHVSGA 170
              +  ++ C +C  K  W +  A       C+ R+  Y D     +  +VC NGH+ G 
Sbjct: 183 VPFHPSEV-CPYCKAK-LWSMLQAKIIPQSACI-RLEAYED----CIEYFVCLNGHLLGI 239

The following BLAST results are available for this feature:

BLAST of Chy7G145100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEA8	6.3e-72	73.65	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 P...	[more]
Q9LF38	5.4e-07	34.92	EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1	[more]

BLAST of Chy7G145100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWJ3	3.1e-98	97.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1	[more]
A0A5D3E0Q4	1.2e-97	97.04	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TSM0	1.2e-97	97.04	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DZU2	1.2e-97	97.04	phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 P...	[more]
A0A6J1DLZ5	7.4e-92	92.31	phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of Chy7G145100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652932.1	2.50e-123	97.63	phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypotheti...	[more]
KAA0044375.1	3.06e-123	97.04	phytochrome A-associated F-box protein [Cucumis melo var. makuwa]	[more]
XP_016901491.1	3.06e-123	97.04	PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phy...	[more]
XP_038905727.1	3.33e-121	95.27	phytochrome A-associated F-box protein [Benincasa hispida]	[more]
XP_022155270.1	4.48e-115	92.31	phytochrome A-associated F-box protein isoform X1 [Momordica charantia]	[more]

BLAST of Chy7G145100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02440.1	4.5e-73	73.65	F-box family protein	[more]
AT5G15440.1	3.9e-08	34.92	EID1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 19..171
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 19..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G145100.1	Chy7G145100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0010099	regulation of photomorphogenesis
cellular_component	GO:0005634	nucleus