Chy7G141720 (gene) Cucumber (hystrix) v1

Overview
NameChy7G141720
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 18064947 .. 18065525 (-)
RNA-Seq ExpressionChy7G141720
SyntenyChy7G141720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTTCCTCTTCAGGCACCACCACCACTCTCTACTATTCTTCTTCTCTGAGCTTCGTCTTCCTTAACCCTTCACCGCCCTTCTTCCTCTTTCCTATTACTCTTTTTTTTCTTTCTTTCAGGTTTAAGAATCTTGAGGATAATCTCTCTTTACTCTGCCCCAAATCTACTTCTCCTATTCCCAGGTACTTATTTTGGTTCTTCTTTAATCTTTCAGTACCCTTTTCGATTTAAATCTCGTTTCTCTTCTGGGTTTTGTTGATTACTCATTTGCTTATTGATTCTAATTAGCTACTTCTCTTTTGTTTTTGTTTTTGTTTTTTTTTTTTCTCATTTTTTCGGGTGATTTGGTTTTTGTTGCAGAGCTAAGTGGCAGAGATTTGATAGAAAATTGGAATGTGGAAATAAAAGAAATGGTAATTAATTTATTTACGAAGTCTGATTTTTTTGTTTTTTAGTTTCCATTTTAGTCTTCTAAAGATTATAAGGATATTGTGATGTTTGAATATCGAATGCAAAAAATTCAACTTAACATGACTTTTATTTTATTTTATTCTGTTTTGAGTGATAAATTTTAA

mRNA sequence

ATGCAGTTCCTCTTCAGGCACCACCACCACTCTCTACTATTCTTCTTCTCTGAGCTTCGTTTAAGAATCTTGAGGATAATCTCTCTTTACTCTGCCCCAAATCTACTTCTCCTATTCCCAGGTACTTATTTTGCTTTTTGTTGCAGAGCTAAGTGGCAGAGATTTGATAGAAAATTGGAATGTGGAAATAAAAGAAATGTCTTCTAAAGATTATAAGGATATTGTGATGTTTGAATATCGAATGCAAAAAATTCAACTTAACATGACTTTTATTTTATTTTATTCTGTTTTGAGTGATAAATTTTAA

Coding sequence (CDS)

ATGCAGTTCCTCTTCAGGCACCACCACCACTCTCTACTATTCTTCTTCTCTGAGCTTCGTTTAAGAATCTTGAGGATAATCTCTCTTTACTCTGCCCCAAATCTACTTCTCCTATTCCCAGGTACTTATTTTGCTTTTTGTTGCAGAGCTAAGTGGCAGAGATTTGATAGAAAATTGGAATGTGGAAATAAAAGAAATGTCTTCTAAAGATTATAAGGATATTGTGATGTTTGAATATCGAATGCAAAAAATTCAACTTAACATGACTTTTATTTTATTTTATTCTGTTTTGAGTGATAAATTTTAA

Protein sequence

MQFLFRHHHHSLLFFFSELRLRILRIISLYSAPNLLLLFPGTYFAFCCRAKWQRFDRKLECGNKRNVF*RL*GYCDV*ISNAKNST*HDFYFILFCFE**ILX
Homology
[Close]
BLAST of Chy7G141720 vs. ExPASy TrEMBL
Match: A0A0A0KXR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026790 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.4e-05
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MQFLFRHHHHSLLFFFSELRLRILRIISLYSAPNL 36
          MQFLFRHHHHSL FFFSELRLRILRII L++ P +
Sbjct: 1  MQFLFRHHHHSLQFFFSELRLRILRIIFLFTLPQI 35

[Close]
BLAST of Chy7G141720 vs. NCBI nr
Match: KAE8637174.1 (hypothetical protein CSA_018805 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.24e-07
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MQFLFRHHHHSLLFFFSELRLRILRIISLYSAPNL 35
          MQFLFRHHHHSL FFFSELRLRILRII L++ P +
Sbjct: 1  MQFLFRHHHHSLQFFFSELRLRILRIIFLFTLPQI 35

The following BLAST results are available for this feature:
BLAST of Chy7G141720 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G141720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXR35.4e-0580.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026790 PE=4 SV=1[more]
BLAST of Chy7G141720 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637174.11.24e-0780.00hypothetical protein CSA_018805 [Cucumis sativus][more]
BLAST of Chy7G141720 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G141720.1Chy7G141720.1mRNA