Chy7G141700 (gene) Cucumber (hystrix) v1

Overview
NameChy7G141700
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTetratricopeptide-like helical
LocationchrH07: 18052614 .. 18053229 (-)
RNA-Seq ExpressionChy7G141700
SyntenyChy7G141700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGATTCTTGTGGAGCCCGTGAGTCCTTATTCATCATCTGCCCTTCAAAGTCTATCTATAAATATCCCAACATCATCACTTTCCAAATCTTCATCAAACCCCAAATCAACTTTATTAACCTCAGCTCTCTACAAAAATTCCCATAAAACATATATCCATATATCTATATCTTTGTAAGCAAATTAGTACACACTTCTGTACTATAGGTTTTCCATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGCTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGATGTTGTTCCACCACATTTATTAGCCGATGAAGAATATGACGAGAATGGTGAACGTGTAACGACGAGTACTATTAGTAACTATTGCTTTCCCATTGATGGCTCATTTGAGGGATGGCGTCGGAGAGATTGCAAAGCTGATGGTGGCCATGGCCATGGCATTTTGAGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAACGGCTTCTAATGGGATGAGTTCAGTGAGAATAATAGTTAGAACTATTTTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAA

mRNA sequence

ATGTTTGATTCTTGTGGAGCCCCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGCTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGATGTTGTTCCACCACATTTATTAGCCGATGAAGAATATGACGAGAATGGTGAACGTGTAACGACGAGTACTATTAGTAACTATTGCTTTCCCATTGATGGCTCATTTGAGGGATGGCGTCGGAGAGATTGCAAAGCTGATGGTGGCCATGGCCATGGCATTTTGAGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAACGGCTTCTAATGGGATGAGTTCAGTGAGAATAATAGTTAGAACTATTTTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAA

Coding sequence (CDS)

ATGTTTGATTCTTGTGGAGCCCCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGCTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGATGTTGTTCCACCACATTTATTAGCCGATGAAGAATATGACGAGAATGGTGAACGTGTAACGACGAGTACTATTAGTAACTATTGCTTTCCCATTGATGGCTCATTTGAGGGATGGCGTCGGAGAGATTGCAAAGCTGATGGTGGCCATGGCCATGGCATTTTGAGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAACGGCTTCTAATGGGATGAGTTCAGTGAGAATAATAGTTAGAACTATTTTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAA

Protein sequence

MFDSCGAPLAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENGERVTTSTISNYCFPIDGSFEGWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMKIISAQRSKM*
Homology
BLAST of Chy7G141700 vs. ExPASy TrEMBL
Match: A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.1e-57
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENG-ERVTTSTISNYCFPIDGSF 68
           LAMAGIDSNEWAMDA+EWERNEIDVVPPHLLADEE DE+G E VTTSTISNYCFP+DGSF
Sbjct: 8   LAMAGIDSNEWAMDAEEWERNEIDVVPPHLLADEEDDEDGDEHVTTSTISNYCFPVDGSF 67

Query: 69  EGWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMKIIS 128
           EGWR RDCKADGGHGHGIL IF SLSKVIEK ASNGMSSVRIIVRTILGFLMVMTMKIIS
Sbjct: 68  EGWRGRDCKADGGHGHGILGIFCSLSKVIEKRASNGMSSVRIIVRTILGFLMVMTMKIIS 127

Query: 129 AQRSKM 134
           AQRSKM
Sbjct: 128 AQRSKM 133

BLAST of Chy7G141700 vs. ExPASy TrEMBL
Match: A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.9e-49
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENGERVTTSTISNYCFPIDGSFE 68
           LAMAGIDSNEW MDAQEWERNEIDVVPPHLLADEE DE+GE V TSTISNYCF +DGSF 
Sbjct: 8   LAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYV-TSTISNYCFRVDGSFG 67

Query: 69  GWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMKIISA 128
           GWRRRD KADG     IL IFYSLSKVIEK ASNGM+SVRIIVRTILGFLMVMTMKIISA
Sbjct: 68  GWRRRDWKADG--ALRILGIFYSLSKVIEKRASNGMNSVRIIVRTILGFLMVMTMKIISA 127

Query: 129 QRSKM 134
           QRSKM
Sbjct: 128 QRSKM 129

BLAST of Chy7G141700 vs. ExPASy TrEMBL
Match: A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENGERVTTSTISNYCFPIDGSFE 68
           LAMAGIDSNEW MDAQEWERNEIDVVPPHLLADEE DE+GE V TSTISNYCF +DGSF 
Sbjct: 8   LAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYV-TSTISNYCFRVDGSFG 67

Query: 69  GWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMT 123
           GWRRRD KADG   H IL IFYSLSKVIEK ASNGM+SVRIIVRTILGFLMVMT
Sbjct: 68  GWRRRDWKADG--AHRILGIFYSLSKVIEKRASNGMNSVRIIVRTILGFLMVMT 118

BLAST of Chy7G141700 vs. ExPASy TrEMBL
Match: A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-17
Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEEYDENGERVTTSTISNYCFPIDGSF 68
           LAMAGIDSNEWAMDA+EWERNE++  +PPHLLADE+ DE  E  T              F
Sbjct: 8   LAMAGIDSNEWAMDAEEWERNEMEKDIPPHLLADED-DEEDEMST-------------KF 67

Query: 69  EGWRRRDCKADGGHGHGIL---RIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMK 128
              R   C+ D G G G+     I + L K+ EK   N +SS+ I+   ++GFLM MT+K
Sbjct: 68  PATRCSCCRKDDGVG-GVSCSPTIMWHLRKITEKRDLNCLSSMEIVTSAVVGFLMFMTIK 120

Query: 129 IISAQRSK 133
           II+++RSK
Sbjct: 128 IIASKRSK 120

BLAST of Chy7G141700 vs. ExPASy TrEMBL
Match: A0A6S7M8U4 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS12194 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.9e-06
Identity = 43/137 (31.39%), Postives = 68/137 (49.64%), Query Frame = 0

Query: 1   MFDSCGAPLAMAGIDSNEWAMDAQEWERNEIDVVPPHLLA----DEEYDENGERVTTSTI 60
           M +S    LAMAG+D NEW M+ +EWER E+   PPHL A    ++E  E G  + TS +
Sbjct: 51  MSNSSIEALAMAGVDYNEWGMEFEEWERMEMGPPPPHLFAEDYEEDERVEGGVSMLTSIV 110

Query: 61  SNYCFPIDGSFEG-WRRRDCKADGGHGHGI-LRIFYSLSKVIEKTASNGMSSVRIIVRTI 120
              C  ++   E  +   D   DG     I L  +Y  +K+++    + +SS   I+   
Sbjct: 111 DELCGAVENQLEDVFDDHDMSEDGEDEFQIPLPKYY--NKIVKGGDEDSISSPSPIIDVA 170

Query: 121 LGFLMVMTMKIISAQRS 132
              +M+  +K+I+   S
Sbjct: 171 GTLIMLNGLKLINVPSS 185

BLAST of Chy7G141700 vs. NCBI nr
Match: TYK16880.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (510), Expect = 7.24e-64
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENGERVTTSTISNYCFPIDGSFE 68
           LAMAGIDSNEW MDAQEWERNEIDVVPPHLLADEE DE+GE VT STISNYCF +DGSF 
Sbjct: 8   LAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVT-STISNYCFRVDGSFG 67

Query: 69  GWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMKIISA 128
           GWRRRD KADG     IL IFYSLSKVIEK ASNGM+SVRIIVRTILGFLMVMTMKIISA
Sbjct: 68  GWRRRDWKADGALR--ILGIFYSLSKVIEKRASNGMNSVRIIVRTILGFLMVMTMKIISA 127

Query: 129 QRSKM 133
           QRSKM
Sbjct: 128 QRSKM 129

BLAST of Chy7G141700 vs. NCBI nr
Match: KAA0044707.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (472), Expect = 3.56e-58
Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENGERVTTSTISNYCFPIDGSFE 68
           LAMAGIDSNEW MDAQEWERNEIDVVPPHLLADEE DE+GE VT STISNYCF +DGSF 
Sbjct: 8   LAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVT-STISNYCFRVDGSFG 67

Query: 69  GWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMT 122
           GWRRRD KADG H   IL IFYSLSKVIEK ASNGM+SVRIIVRTILGFLMVMT
Sbjct: 68  GWRRRDWKADGAHR--ILGIFYSLSKVIEKRASNGMNSVRIIVRTILGFLMVMT 118

BLAST of Chy7G141700 vs. NCBI nr
Match: KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138 bits (347), Expect = 4.97e-39
Identity = 81/127 (63.78%), Postives = 92/127 (72.44%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEEYDENGERVTTSTISNYCFPIDGSF 68
           LAMAGI SNEWAMDA+EWERNEI+  VPPHLLADE+ D++     TST+SNY FP+ G F
Sbjct: 8   LAMAGITSNEWAMDAEEWERNEIENDVPPHLLADEDDDDDN---VTSTVSNYSFPVAGFF 67

Query: 69  EGWRRRDCKADGGHG-HGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMKII 128
           +  RR D    G H  H    I  SLSK +EK ASNGMSSVRIIVRTILGFL+V  +KII
Sbjct: 68  DSLRRED---GGAHDIHCFWGILCSLSKSLEKRASNGMSSVRIIVRTILGFLLVKILKII 127

Query: 129 SAQRSKM 133
           SA  S M
Sbjct: 128 SAHTSNM 128

BLAST of Chy7G141700 vs. NCBI nr
Match: KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (345), Expect = 1.00e-38
Identity = 80/126 (63.49%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEEYDENGERVTTSTISNYCFPIDGSF 68
           LAMAGI SNEWAMDA+EWERNEI+  VPPHLLADE+ D++     TST+SNY FP+ G F
Sbjct: 8   LAMAGITSNEWAMDAEEWERNEIENDVPPHLLADEDDDDDN---VTSTVSNYSFPVAGFF 67

Query: 69  EGWRRRDCKADGGHGHGILRIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMKIIS 128
           +   R D  AD  H      I  SLSK +EK ASNGMSSVRIIVRTILGFL+V  +KIIS
Sbjct: 68  DSLHREDGGADDIHC--FWGILCSLSKSLEKRASNGMSSVRIIVRTILGFLLVKILKIIS 127

Query: 129 AQRSKM 133
           A  S M
Sbjct: 128 AHTSNM 128

BLAST of Chy7G141700 vs. NCBI nr
Match: XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata])

HSP 1 Score: 97.4 bits (241), Expect = 4.38e-23
Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 0

Query: 9   LAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEEYDENGERVTTSTISNYCFPIDGSF 68
           LAMAGIDSNEWAMDA+EWERNE++  +PPHLLADE+ DE  E  T              F
Sbjct: 8   LAMAGIDSNEWAMDAEEWERNEMEKDIPPHLLADED-DEEDEMST-------------KF 67

Query: 69  EGWRRRDCKADGGHGHGIL---RIFYSLSKVIEKTASNGMSSVRIIVRTILGFLMVMTMK 128
              R   C+ D G G G+     I + L K+ EK   N +SS+ I+   ++GFLM MT+K
Sbjct: 68  PATRCSCCRKDDGVG-GVSCSPTIMWHLRKITEKRDLNCLSSMEIVTSAVVGFLMFMTIK 120

Query: 129 IISAQRSK 132
           II+++RSK
Sbjct: 128 IIASKRSK 120

BLAST of Chy7G141700 vs. TAIR 10
Match: AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 5.3e-05
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0

Query: 9  LAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEEYDENGE 50
          LAMAG+D  EW +  +EWE  E  VVP HLLAD+  +E  E
Sbjct: 4  LAMAGVDYQEWGLSIEEWELQE-SVVPLHLLADDFKEEEQE 43

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWE72.1e-5792.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1[more]
A0A5D3CZU07.9e-4986.40Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7TS682.0e-4485.96Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A6J1FX981.2e-1747.66uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC1114478... [more]
A0A6S7M8U44.9e-0631.39Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS12194 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
TYK16880.17.24e-6486.40Tetratricopeptide-like helical [Cucumis melo var. makuwa][more]
KAA0044707.13.56e-5885.96Tetratricopeptide-like helical [Cucumis melo var. makuwa][more]
KAG6577295.14.97e-3963.78hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7015383.11.00e-3863.49hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022943015.14.38e-2347.66uncharacterized protein LOC111447880 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G22320.15.3e-0553.66unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacter... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G141700.1Chy7G141700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane