Chy7G141290 (gene) Cucumber (hystrix) v1

Overview
NameChy7G141290
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 17652712 .. 17654557 (-)
RNA-Seq ExpressionChy7G141290
SyntenyChy7G141290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTAATCAACAATACTGCCAAATCTAACCTATTTTGGGCGGGGTTTTTGTTTTCTGTTTGAGAAGATACAGATTTCAAATCAGATTCATTTCATTTGTAGATCGTTATCTCTTCCTCGCCCAATCAAGCTCTCTCTTTCTCTCTTTCTCTCTAGGGCTTTCAACGGTTTAAGGTCAAGTGCTCTTTCAAGGTAATTACGCATCTCTAATATTTGGATTTCTGGATTTTCTATCATTAATTCGCTGTATATTACGGTTTAATTGCCTGCCTGTCTCTATGATTTTATTGTACTTTCATTTGGTCGCTCATGACTGTCGTATCGCTTTCGATTTCTGCCTTGAGGTGTTATTGATTTCCGTTTAGAAATTGTTTTTTTTCTCCCCTTGAAGCTTGGATGTTGGTCACGTAGATTTTATAGCTCTTAATATTGGATATTTTTATACTTTATTTCTGGGTTTAATTTGTGGCATGCCTTAAGTTCCTAGATTTGTACGAAAACGGGTCTTGATCTCCTGTTCGGTGCTGTAATTTTAAAAATGTTGATAACGTTTTTGTTTGGTACTGTGTTTTTTGTTGTATACCTTGTGCAGGTAGGGGTTGTGCCGATGTTTTTCATCGTTGTCATTGATGAAGTTTTTAGATTTGTAATGTAGGAGACATTAATTTATAAATCTTAAACTAGGCAAAAATTAGCTTCCAGAGCGATGATTTTACAGGTTCACGTCCAACATATCTTACAAACGCCTGATCTGACTCAACCTAAGTGGATCAAGTTTGTTGGGGCCTGGGGGTAATTTGGAGGTTTTATAACCCACCCTTACGCTAGTTTTATGAGATCATCTCATATTTGCTTTTACTTTTTTTTCTTCGGATACACACTGCTGTCAAATGGCTTTCGTCTTTCTTTTACTAGGATCAACAAGAAAAAATCAGATATAAAGGGATTGATAAAGATTGATCTGCTTAGGTTTCTGGGCTTAGTGACATTTCAATTTTTGGGTGCAATGTCCTACTCATACGAGTAATTGATTGGGGGAGTGAATCCAAGGCAATGAAACTATTTTACCCTTGTGAAGTTGGGGTCCCAGTAGTGGACAACGCTGCTGTCTTTTGACCTCTTTTGAATTATGATGACTGAAGTTGTAATGGCTGCCTAGGAGTTTTGACAATATATAATATTATGTTCATTCTTGAGGATGAGGTGATACCTGAATCATTGGGGACGTGTAATGTTTGACATCAAAAGTAGTCATATAAGTTAGTTTAAGTAATACAAAGTTATGGAGGTAGCTATTGTCAGTAAGTAGAGTGCAAACTATGAGTATGAGAGAGGAGTTTGTTTTGTTAGCCTTTAGGAGGTTATGTATACAAATATGGTAAGGTCACGAGAAATTTGGGAGATTTTGAGATTAGTTTATGGCAGAGAGATAGCCTACTAAATTTCTAGTACCCATGCTCTAATTCACCCCAACCATTGTTCTATCGTAATTGTTTGACTATTTATTAGAGACTATTCATTGATTTCTGACTTGAGTAATCTTGAGAGGGGGAAATTTCTCATAACTTCTGATAAAATTCTACTGCCAATCTTAACAAGCTGTTCAGTTTCCAGTTTTTAATTGTAGTTTCTCGGTAGTCGGTTTTATTATCTTTATTTTATTTTTTCTGGTGATGTATATTTTTATGTGTTTCATTTGAATGGAGATTTGAAAATTTTATGTTTCCTTGGAACATCTTGTTTCATTCTCTGATTTGCAAGTTGCTGACTATAGTTTTACTATTTTTTCAGGACAGAAGGGCAAGTCAAAGAAGTTAACAGATTTTGGTGTTTGAGGCTGTAA

mRNA sequence

ATGTGTTTAATCAACAATACTGCCAAATCTAACCTATTTTGGGCGGGATCGTTATCTCTTCCTCGCCCAATCAAGCTCTCTCTTTCTCTCTTTCTCTCTAGGGCTTTCAACGGTTTAAGGTCAAGTGCTCTTTCAAGGACAGAAGGGCAAGTCAAAGAAGTTAACAGATTTTGGTGTTTGAGGCTGTAA

Coding sequence (CDS)

ATGTGTTTAATCAACAATACTGCCAAATCTAACCTATTTTGGGCGGGATCGTTATCTCTTCCTCGCCCAATCAAGCTCTCTCTTTCTCTCTTTCTCTCTAGGGCTTTCAACGGTTTAAGGTCAAGTGCTCTTTCAAGGACAGAAGGGCAAGTCAAAGAAGTTAACAGATTTTGGTGTTTGAGGCTGTAA

Protein sequence

MCLINNTAKSNLFWAGSLSLPRPIKLSLSLFLSRAFNGLRSSALSRTEGQVKEVNRFWCLRL*
Homology
[Close]
BLAST of Chy7G141290 vs. ExPASy TrEMBL
Match: A0A0A0KZD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038640 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-23
Identity = 60/66 (90.91%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  MCLINNTAKSNLFWAGSLSLPRPIK----LSLSLFLSRAFNGLRSSALSRTEGQVKEVNR 60
          MCLINN AKS+LFWAGSLSLPRPIK    LSLSLFLSRAFNGLRSSALSRTEGQVKEVNR
Sbjct: 1  MCLINNPAKSDLFWAGSLSLPRPIKLSLFLSLSLFLSRAFNGLRSSALSRTEGQVKEVNR 60

Query: 61 FWCLRL 63
          FWCLRL
Sbjct: 61 FWCLRL 66

[Close]
BLAST of Chy7G141290 vs. NCBI nr
Match: KGN53246.1 (hypothetical protein Csa_015139 [Cucumis sativus])

HSP 1 Score: 117 bits (293), Expect = 7.24e-33
Identity = 60/66 (90.91%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  MCLINNTAKSNLFWAGSLSLPRPIKLSL----SLFLSRAFNGLRSSALSRTEGQVKEVNR 60
          MCLINN AKS+LFWAGSLSLPRPIKLSL    SLFLSRAFNGLRSSALSRTEGQVKEVNR
Sbjct: 1  MCLINNPAKSDLFWAGSLSLPRPIKLSLFLSLSLFLSRAFNGLRSSALSRTEGQVKEVNR 60

Query: 61 FWCLRL 62
          FWCLRL
Sbjct: 61 FWCLRL 66

The following BLAST results are available for this feature:
BLAST of Chy7G141290 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G141290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZD42.7e-2390.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038640 PE=4 SV=1[more]
BLAST of Chy7G141290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53246.17.24e-3390.91hypothetical protein Csa_015139 [Cucumis sativus][more]
BLAST of Chy7G141290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G141290.1Chy7G141290.1mRNA