Chy7G139900 (gene) Cucumber (hystrix) v1

Overview
NameChy7G139900
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMyb-related protein like
LocationchrH07: 16507711 .. 16508818 (-)
RNA-Seq ExpressionChy7G139900
SyntenyChy7G139900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAACTCACCCTAACCTTCCTTCTCTTCTTCGTCCTTATCACTTCCTCACGCGCTCGAGATCTCATAAATTTACCGGACACACCAGAGTCCCTCTCCTTTTCCGTCTCTGCACCCGCCCAGGATTCCGATTCCAAGGCCTCGATCCTCCTCCCGACCCAGAAATTGTCCGATGACGAATCTCCAAGATCCATTCCAGACACCGATCAGGTACGCACCGAACCCAATCCTACTGAAATTACGGCTCTTGATACCATAGACACCGTTTCAGATCCGGTAGTTATGATCACTTTCCGTCCAATCAACCGTCAATTCGGTCGACCATCGGTGCCGCTGATGTTCCGGAGAGGCCGCCGCGGCTGTCACCACCTCCGCAGCGTGAAGCCGTGGAGATCAAACGATCGCGTAGACGAAATCTCATACGGAAACGACATGATCGTACCTGAGGAGAGATATAACCGCGAAATTGCAATTCCGTCGAAATGGAGTGAGTTCCGACATGTCAGACCGTGGGAGGATTCGTACGGTAGCGATTGGAAGGAAGATAAGAAGCATCTCCATCATCATTATTTCCATCACCAACACCATGAAGAAGAAGAAGAGCATGAACACAAAGAAAAGAGCAGTTTATTGAGGAAATTCCGTAAGTTTTTGAAGCATTTGGAGTTCTGAAGATACAAAATTAAACTACAAATGATACGATTATCTGTTCTTCAGGTTTATGTTCTTTTTTGCTTTTTCTTGAATTGCAATAAGGTAATTAGCGTTTTACATAGTTGTGTATAGGATTTTGAATCCTTAATTATGTGTAATATAATAGCGTTGCTTTTGATATGAGTGGGAGTGTGTAACTTCACTTAATTAATTACAATAATTATGCATAATGTATCTATTTGCCTGTTCATGTTATATGAATTATGTTTTTGAATGCTTTTATGGATTATATGATTCTTGCGTATTCAATTTTGTGTATATAATCATGAGAGAATTAAAATCTTTATTTATATTATTTCTCAACAACAGTGTCATCCGATATCAAAACTATGCGCTATCTACATACTACGCCTATAAAAACGATACTCTAAGCTTTTCTAATATGGCATGA

mRNA sequence

ATGGCCAAACTCACCCTAACCTTCCTTCTCTTCTTCGTCCTTATCACTTCCTCACGCGCTCGAGATCTCATAAATTTACCGGACACACCAGAGTCCCTCTCCTTTTCCGTCTCTGCACCCGCCCAGGATTCCGATTCCAAGGCCTCGATCCTCCTCCCGACCCAGAAATTGTCCGATGACGAATCTCCAAGATCCATTCCAGACACCGATCAGGTACGCACCGAACCCAATCCTACTGAAATTACGGCTCTTGATACCATAGACACCGTTTCAGATCCGGTAGTTATGATCACTTTCCGTCCAATCAACCGTCAATTCGGTCGACCATCGGTGCCGCTGATGTTCCGGAGAGGCCGCCGCGGCTGTCACCACCTCCGCAGCGTGAAGCCGTGGAGATCAAACGATCGCGTAGACGAAATCTCATACGGAAACGACATGATCGTACCTGAGGAGAGATATAACCGCGAAATTGCAATTCCGTCGAAATGGAGTGAGTTCCGACATGTCAGACCGTGGGAGGATTCTGTCATCCGATATCAAAACTATGCGCTATCTACATACTACGCCTATAAAAACGATACTCTAAGCTTTTCTAATATGGCATGA

Coding sequence (CDS)

ATGGCCAAACTCACCCTAACCTTCCTTCTCTTCTTCGTCCTTATCACTTCCTCACGCGCTCGAGATCTCATAAATTTACCGGACACACCAGAGTCCCTCTCCTTTTCCGTCTCTGCACCCGCCCAGGATTCCGATTCCAAGGCCTCGATCCTCCTCCCGACCCAGAAATTGTCCGATGACGAATCTCCAAGATCCATTCCAGACACCGATCAGGTACGCACCGAACCCAATCCTACTGAAATTACGGCTCTTGATACCATAGACACCGTTTCAGATCCGGTAGTTATGATCACTTTCCGTCCAATCAACCGTCAATTCGGTCGACCATCGGTGCCGCTGATGTTCCGGAGAGGCCGCCGCGGCTGTCACCACCTCCGCAGCGTGAAGCCGTGGAGATCAAACGATCGCGTAGACGAAATCTCATACGGAAACGACATGATCGTACCTGAGGAGAGATATAACCGCGAAATTGCAATTCCGTCGAAATGGAGTGAGTTCCGACATGTCAGACCGTGGGAGGATTCTGTCATCCGATATCAAAACTATGCGCTATCTACATACTACGCCTATAAAAACGATACTCTAAGCTTTTCTAATATGGCATGA

Protein sequence

MAKLTLTFLLFFVLITSSRARDLINLPDTPESLSFSVSAPAQDSDSKASILLPTQKLSDDESPRSIPDTDQVRTEPNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRRGCHHLRSVKPWRSNDRVDEISYGNDMIVPEERYNREIAIPSKWSEFRHVRPWEDSVIRYQNYALSTYYAYKNDTLSFSNMA*
Homology
BLAST of Chy7G139900 vs. ExPASy TrEMBL
Match: A0A0A0KYD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051490 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 163/181 (90.06%), Postives = 168/181 (92.82%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDTPESLSFSVSAPAQDSDSKASILLPTQKLSDD 60
           MAKLTLTFLLFFVL+TSS ARDLINLPDT ESL+FSVSAPAQDSD K+SILLPTQKLSDD
Sbjct: 1   MAKLTLTFLLFFVLVTSSCARDLINLPDTSESLTFSVSAPAQDSDFKSSILLPTQKLSDD 60

Query: 61  ESPRSIPDTDQVRTEPNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR 120
           ESPRSIPDTDQVRTE NPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR
Sbjct: 61  ESPRSIPDTDQVRTESNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR 120

Query: 121 GCHHLRSVKPWRSNDRVDEISYGNDMIVPEER------YNREIAIPSKWSEFRHVRPWED 176
           GCHHLRSVKPWRS DR++EISYGNDMIVPEER       NREIAIPSK SEFRHVRPWED
Sbjct: 121 GCHHLRSVKPWRSIDRLNEISYGNDMIVPEERSNPNSGSNREIAIPSKLSEFRHVRPWED 180

BLAST of Chy7G139900 vs. ExPASy TrEMBL
Match: A0A5D3CX93 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003810 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.6e-67
Identity = 142/183 (77.60%), Postives = 155/183 (84.70%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDTPESLSFSVSAPAQDSDSKASILLPTQKLSDD 60
           MAKLTLTF+LFFVLI+SS ARDL NLP+  E+L FSV   A+DSDSKASILLP+QKLS+ 
Sbjct: 1   MAKLTLTFILFFVLISSSLARDLKNLPEHAEALPFSVIESAEDSDSKASILLPSQKLSES 60

Query: 61  ESPRSIPDTDQVRTEPNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR 120
           E P+SIP+TDQVRT+ NPTEIT LDTIDTV+DPVVMITFRPINRQFGR SVPLMFRRGRR
Sbjct: 61  EFPKSIPETDQVRTQSNPTEITTLDTIDTVADPVVMITFRPINRQFGRRSVPLMFRRGRR 120

Query: 121 GCHHLRSVKPWRSNDRVDEISYGNDMIVPEER------YNREIAIPSKWSEFRHVRPWED 178
           GCHHLRS+KPWRS DRV+ ISYGNDMIVPEER       NREIAIP K S FRHV PWE 
Sbjct: 121 GCHHLRSLKPWRSIDRVEGISYGNDMIVPEERSSPNSGSNREIAIPLKLSGFRHVGPWEG 180

BLAST of Chy7G139900 vs. ExPASy TrEMBL
Match: A0A498I9A5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_040092 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-09
Identity = 68/198 (34.34%), Postives = 90/198 (45.45%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDT------PESLSFSVSAPAQDSDSKASILLPT 60
           MAKL L+    F L   SRA    +LP        P  +    S P   + +  +ILLP+
Sbjct: 1   MAKLLLSLAALFFLFAFSRAHTSSDLPANEIKARDPADVKLPESNPKPKTPTTTTILLPS 60

Query: 61  QKLSDDESPRSIPDTDQVRTEPNPTEITAL----DTIDTVSDPVVMITFRPINRQFGRPS 120
           +K          PDT+      + T  T L     TI+TV  P+ + +FRP+NR F R  
Sbjct: 61  EK----------PDTE------SATGATILPKEESTIETV--PLTVFSFRPVNRHFPRRP 120

Query: 121 VPLMFRRGRRGCHHLRSVKPW--------RSNDRVDEISYGNDMIV---------PEERY 172
            PL FR GRR C H R  +PW        R +   + +SYGNDMI+         P  R 
Sbjct: 121 FPLSFRHGRRPCGHGR--RPWTPRFHGGEREHREGESVSYGNDMIMASGDNMGFDPAFR- 177

BLAST of Chy7G139900 vs. ExPASy TrEMBL
Match: A0A5N5H3W7 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039540 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.4e-09
Identity = 68/198 (34.34%), Postives = 93/198 (46.97%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLP-------DTPESLSFSVSAPAQDSDSKASILLP 60
           MAKL L+    F+L + S AR   +LP       DT ++     S P   + + A+ILLP
Sbjct: 18  MAKLLLSLAALFLLFSFSHARTSSDLPANEIKARDTADA-KLPESNPKPKTPTTATILLP 77

Query: 61  TQKLSDDESPRSIPDTDQVRTEPNPTEITAL----DTIDTVSDPVVMITFRPINRQFGRP 120
           ++K          PDT+      + T  T L     TI+TV  P+ + +FRP+NR F R 
Sbjct: 78  SEK----------PDTE------SATGATILAKEESTIETV--PLTVFSFRPVNRHFPRR 137

Query: 121 SVPLMFRRGRRGCHHLRSVKPW--------RSNDRVDEISYGNDMIVPE--------ERY 172
             PL FR G R C H R  +PW        R +   + +SYGNDMI+            +
Sbjct: 138 PFPLSFRHG-RPCRHSR--RPWTPRFHGGEREHREGESVSYGNDMIMASGDNMGFDPAFH 193

BLAST of Chy7G139900 vs. ExPASy TrEMBL
Match: A0A540MSN8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_012571 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 68/198 (34.34%), Postives = 92/198 (46.46%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDT------PESLSFSVSAPAQDSDSKASILLPT 60
           MAKL L+    F+L   SRAR   +LP        P  +  + S P   + +  +ILLP+
Sbjct: 1   MAKLLLSLAALFLLFAFSRARTSSDLPANEIKARDPADVKLTESNPKPKTPTTTTILLPS 60

Query: 61  QKLSDDESPRSIPDTDQVRTEPNPTEITAL----DTIDTVSDPVVMITFRPINRQFGRPS 120
           +K          PDT+      + T  T L     TI+TV  P+ + +FRP+NR F R  
Sbjct: 61  EK----------PDTE------SATGATILPKEESTIETV--PLTVFSFRPVNRHFPRRP 120

Query: 121 VPLMFRRGRRGCHHLRSVKPW--------RSNDRVDEISYGNDMIV---------PEERY 172
            PL FR G R C H R  +PW        R +   + +SYGNDMI+         P  R 
Sbjct: 121 FPLSFRHG-RPCGHGR--RPWTPRFHGGEREHREGESVSYGNDMIMASGDNMGIDPAFR- 176

BLAST of Chy7G139900 vs. NCBI nr
Match: KGN53397.1 (hypothetical protein Csa_014640 [Cucumis sativus])

HSP 1 Score: 307 bits (786), Expect = 2.91e-103
Identity = 163/181 (90.06%), Postives = 168/181 (92.82%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDTPESLSFSVSAPAQDSDSKASILLPTQKLSDD 60
           MAKLTLTFLLFFVL+TSS ARDLINLPDT ESL+FSVSAPAQDSD K+SILLPTQKLSDD
Sbjct: 1   MAKLTLTFLLFFVLVTSSCARDLINLPDTSESLTFSVSAPAQDSDFKSSILLPTQKLSDD 60

Query: 61  ESPRSIPDTDQVRTEPNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR 120
           ESPRSIPDTDQVRTE NPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR
Sbjct: 61  ESPRSIPDTDQVRTESNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR 120

Query: 121 GCHHLRSVKPWRSNDRVDEISYGNDMIVPEERYN------REIAIPSKWSEFRHVRPWED 175
           GCHHLRSVKPWRS DR++EISYGNDMIVPEER N      REIAIPSK SEFRHVRPWED
Sbjct: 121 GCHHLRSVKPWRSIDRLNEISYGNDMIVPEERSNPNSGSNREIAIPSKLSEFRHVRPWED 180

BLAST of Chy7G139900 vs. NCBI nr
Match: KAA0044909.1 (hypothetical protein E6C27_scaffold74G002030 [Cucumis melo var. makuwa] >TYK16561.1 hypothetical protein E5676_scaffold21G003810 [Cucumis melo var. makuwa])

HSP 1 Score: 262 bits (670), Expect = 1.33e-85
Identity = 142/183 (77.60%), Postives = 155/183 (84.70%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDTPESLSFSVSAPAQDSDSKASILLPTQKLSDD 60
           MAKLTLTF+LFFVLI+SS ARDL NLP+  E+L FSV   A+DSDSKASILLP+QKLS+ 
Sbjct: 1   MAKLTLTFILFFVLISSSLARDLKNLPEHAEALPFSVIESAEDSDSKASILLPSQKLSES 60

Query: 61  ESPRSIPDTDQVRTEPNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGRR 120
           E P+SIP+TDQVRT+ NPTEIT LDTIDTV+DPVVMITFRPINRQFGR SVPLMFRRGRR
Sbjct: 61  EFPKSIPETDQVRTQSNPTEITTLDTIDTVADPVVMITFRPINRQFGRRSVPLMFRRGRR 120

Query: 121 GCHHLRSVKPWRSNDRVDEISYGNDMIVPEERY------NREIAIPSKWSEFRHVRPWED 177
           GCHHLRS+KPWRS DRV+ ISYGNDMIVPEER       NREIAIP K S FRHV PWE 
Sbjct: 121 GCHHLRSLKPWRSIDRVEGISYGNDMIVPEERSSPNSGSNREIAIPLKLSGFRHVGPWEG 180

BLAST of Chy7G139900 vs. NCBI nr
Match: KAG6600524.1 (hypothetical protein SDJN03_05757, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166 bits (419), Expect = 1.29e-47
Identity = 100/184 (54.35%), Postives = 123/184 (66.85%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITS-SRARDLINLPDTPESLSFSVSAPAQDSDSKASILLPTQKLSD 60
           MAK TLTFLLF V + S S AR L    +   S+S S S    DSD KASI LP++KLS+
Sbjct: 1   MAKPTLTFLLFVVFVVSFSHARQLTERSEHEVSVSGSASGSIDDSDLKASIFLPSEKLSE 60

Query: 61  DESPRSIPDTDQVRTEPNPTEITALDTIDTVSDPVVMITFRPINRQFGRPSVPLMFRRGR 120
            E+P+S+   +QVRTE NP+EI A+D  ++VSDPVV++TFRPINRQF R +VPL+FRR R
Sbjct: 61  YEAPKSMSVLNQVRTEDNPSEINAVDATESVSDPVVVLTFRPINRQFDRRTVPLIFRRSR 120

Query: 121 RGCHHLRSVKPWRSNDRVDEISYGNDMIVPEERYN----------REIAIPSKWSEFRHV 173
           RGCH   + KP+     V  ISYGNDMIV +ER +          REIAIPS+W E RH 
Sbjct: 121 RGCHRRHNFKPYS----VGRISYGNDMIVADERQSPNSVANWGSDREIAIPSRWREIRHD 180

BLAST of Chy7G139900 vs. NCBI nr
Match: KAF3448691.1 (hypothetical protein FNV43_RR09404 [Rhamnella rubrinervis])

HSP 1 Score: 73.9 bits (180), Expect = 4.30e-12
Identity = 66/187 (35.29%), Postives = 92/187 (49.20%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPD----TPESLSFSVSAPAQDSDSKASILLPTQK 60
           MAKL LT  +  V    S AR   +LP     T ESL+  +          A++ LP+++
Sbjct: 1   MAKLVLTIAVICVFFAFSHARTPADLPVADVITDESLNDHLET--------ATLRLPSER 60

Query: 61  LSDDESPRSIPDTDQVRTEPNPTEIT-ALDTID----TVSDPVVMITFRPINRQFGRPSV 120
             D+  P +  +  +  TE    E T + D  D    + S P+ +I+FRPINR F R   
Sbjct: 61  --DESEPVTKVEWVRESTESKRPETTESFDKPDESEPSDSVPLTVISFRPINRHFPRRPF 120

Query: 121 PLMFRRGRRGCHHLRSVKPWRSNDRVDEISYGNDMIVPEERYNREIA-------IPSKWS 171
           PL FRRG    H     KPW    +  E+SYGNDMIV +E   + ++       IP++WS
Sbjct: 121 PLTFRRGHPCRHSHPQFKPWDPRPQRREVSYGNDMIVSDELRFKPVSHNEDQPQIPARWS 177

BLAST of Chy7G139900 vs. NCBI nr
Match: RXH78121.1 (hypothetical protein DVH24_040092 [Malus domestica])

HSP 1 Score: 72.0 bits (175), Expect = 2.41e-11
Identity = 68/198 (34.34%), Postives = 89/198 (44.95%), Query Frame = 0

Query: 1   MAKLTLTFLLFFVLITSSRARDLINLPDT------PESLSFSVSAPAQDSDSKASILLPT 60
           MAKL L+    F L   SRA    +LP        P  +    S P   + +  +ILLP+
Sbjct: 1   MAKLLLSLAALFFLFAFSRAHTSSDLPANEIKARDPADVKLPESNPKPKTPTTTTILLPS 60

Query: 61  QKLSDDESPRSIPDTDQVRTEPNPTEITAL----DTIDTVSDPVVMITFRPINRQFGRPS 120
           +K          PDT+        T  T L     TI+TV  P+ + +FRP+NR F R  
Sbjct: 61  EK----------PDTESA------TGATILPKEESTIETV--PLTVFSFRPVNRHFPRRP 120

Query: 121 VPLMFRRGRRGCHHLRSVKPW--------RSNDRVDEISYGNDMIV---------PEERY 171
            PL FR GRR C H R  +PW        R +   + +SYGNDMI+         P  R 
Sbjct: 121 FPLSFRHGRRPCGHGR--RPWTPRFHGGEREHREGESVSYGNDMIMASGDNMGFDPAFR- 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KYD01.2e-8090.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051490 PE=4 SV=1[more]
A0A5D3CX932.6e-6777.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A498I9A51.4e-0934.34Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_040092 PE=4 SV=1[more]
A0A5N5H3W75.4e-0934.34Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A540MSN81.2e-0834.34Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_012571 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN53397.12.91e-10390.06hypothetical protein Csa_014640 [Cucumis sativus][more]
KAA0044909.11.33e-8577.60hypothetical protein E6C27_scaffold74G002030 [Cucumis melo var. makuwa] >TYK1656... [more]
KAG6600524.11.29e-4754.35hypothetical protein SDJN03_05757, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3448691.14.30e-1235.29hypothetical protein FNV43_RR09404 [Rhamnella rubrinervis][more]
RXH78121.12.41e-1134.34hypothetical protein DVH24_040092 [Malus domestica][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G139900.1Chy7G139900.1mRNA