Chy7G139320 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G139320
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NDR1/HIN1-like protein 12
Location	chrH07: 15972812 .. 15973414 (+)
RNA-Seq Expression	Chy7G139320
Synteny	Chy7G139320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCCAAACTAATCTCCGACGCAAAGCGCCACACTAATCCCTTCGTTTGGCTCGCTGCCTTACTCTGTACCGTTGTTTCAATCGCCGTCATCATCGGAGGCATCGTCGTCTTCATCGGTTACCTAGTCATCCACCCTAGGATTCCCACCATCTCCATTCTCGACGCTCATCTCGACAACTTCCAAATTGACATCGCCGGCCGCCTCGAAGTTCAGTTAACGATCATCATTGAAGCGAAGAATGATAACGCGAAAGCTCACGCTAGTTTCTCGGATTCAAGTTTCTTCCTCCATTTCTTAGGGATCAAGATCGCACAACTTGTGGCGGATCCATTCGAAGTGAGGAAGAACAGTTCAGTGAAATTCCCTTACGCTGTTGTTTCGAATTCAATTCCTCTGAATCCAGAGCAAATGGAGAGCGTTGATTCTGATTTGAAGGCAGATCTGAGTCGATTTGATTTGATAGGGAATACGAGAGTTCAATGGCGAGTTGGATTGCTTGGATCTGTGAAGTATGAATGTCATCTTCATTGTGGGCTTAAATTTCATCCTTCTAATGGAACTTATTTGAGTTCTCCATGCAGTTCCAGAGTTAAATGA

mRNA sequence

ATGCCACCCAAACTAATCTCCGACGCAAAGCGCCACACTAATCCCTTCGTTTGGCTCGCTGCCTTACTCTGTACCGTTGTTTCAATCGCCGTCATCATCGGAGGCATCGTCGTCTTCATCGGTTACCTAGTCATCCACCCTAGGATTCCCACCATCTCCATTCTCGACGCTCATCTCGACAACTTCCAAATTGACATCGCCGGCCGCCTCGAAGTTCAGTTAACGATCATCATTGAAGCGAAGAATGATAACGCGAAAGCTCACGCTAGTTTCTCGGATTCAAGTTTCTTCCTCCATTTCTTAGGGATCAAGATCGCACAACTTGTGGCGGATCCATTCGAAGTGAGGAAGAACAGTTCAGTGAAATTCCCTTACGCTGTTGTTTCGAATTCAATTCCTCTGAATCCAGAGCAAATGGAGAGCGTTGATTCTGATTTGAAGGCAGATCTGAGTCGATTTGATTTGATAGGGAATACGAGAGTTCAATGGCGAGTTGGATTGCTTGGATCTGTGAATTCCAGAGTTAAATGA

Coding sequence (CDS)

ATGCCACCCAAACTAATCTCCGACGCAAAGCGCCACACTAATCCCTTCGTTTGGCTCGCTGCCTTACTCTGTACCGTTGTTTCAATCGCCGTCATCATCGGAGGCATCGTCGTCTTCATCGGTTACCTAGTCATCCACCCTAGGATTCCCACCATCTCCATTCTCGACGCTCATCTCGACAACTTCCAAATTGACATCGCCGGCCGCCTCGAAGTTCAGTTAACGATCATCATTGAAGCGAAGAATGATAACGCGAAAGCTCACGCTAGTTTCTCGGATTCAAGTTTCTTCCTCCATTTCTTAGGGATCAAGATCGCACAACTTGTGGCGGATCCATTCGAAGTGAGGAAGAACAGTTCAGTGAAATTCCCTTACGCTGTTGTTTCGAATTCAATTCCTCTGAATCCAGAGCAAATGGAGAGCGTTGATTCTGATTTGAAGGCAGATCTGAGTCGATTTGATTTGATAGGGAATACGAGAGTTCAATGGCGAGTTGGATTGCTTGGATCTGTGAATTCCAGAGTTAAATGA

Protein sequence

MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSVKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVNSRVK*

Homology

[Close]

BLAST of Chy7G139320 vs. ExPASy TrEMBL
Match: A0A0A0KX91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.7e-87
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHT+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 172
           +KFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. ExPASy TrEMBL
Match: A0A5A7TFZ2 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00150 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 158/171 (92.40%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHT+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 172
           +KF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSV
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. ExPASy TrEMBL
Match: A0A5D3D1V8 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002470 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR T+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 172
           +KF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSV
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. ExPASy TrEMBL
Match: A0A1S3BSH0 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR T+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 172
           +KF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSV
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. ExPASy TrEMBL
Match: A0A6J1ETW1 (uncharacterized protein LOC111437517 OS=Cucurbita moschata OX=3662 GN=LOC111437517 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73
Identity = 141/174 (81.03%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR T+P VWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I ++DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQ DIAGRLEVQLT++++A+NDNAKAHASFSD+SFFLHFLGIKIAQLVA  F+VRKNSS
Sbjct: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVNSR 175
           +  PY V SNSIPL PEQME VD  LK+D+SRFDLIG+TRVQWRVGLLGSV  R
Sbjct: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYR 174

[Close]

BLAST of Chy7G139320 vs. NCBI nr
Match: KAE8649223.1 (hypothetical protein Csa_014865 [Cucumis sativus])

HSP 1 Score: 338 bits (868), Expect = 5.40e-117
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHT+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVNSRVK 176
           +KFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVNSRVK
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVNSRVK 176

[Close]

BLAST of Chy7G139320 vs. NCBI nr
Match: XP_004150550.1 (uncharacterized protein LOC101214190 [Cucumis sativus])

HSP 1 Score: 329 bits (843), Expect = 8.12e-113
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHT+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 171
           +KFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. NCBI nr
Match: KAA0040179.1 (NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 310 bits (794), Expect = 2.38e-105
Identity = 158/171 (92.40%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHT+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 171
           +KF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSV
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. NCBI nr
Match: XP_008451870.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >TYK16449.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (786), Expect = 3.94e-104
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR T+P VWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 171
           +KF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSV
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. NCBI nr
Match: XP_038904240.1 (NDR1/HIN1-like protein 12 [Benincasa hispida])

HSP 1 Score: 291 bits (746), Expect = 4.89e-98
Identity = 147/171 (85.96%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPPKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR T+P VWLAA+LCTVVSIAVIIGGIV+FIGYLVIHPRIPT+S+LDAHL+
Sbjct: 1   MPPKLISDAKRRTHPLVWLAAVLCTVVSIAVIIGGIVIFIGYLVIHPRIPTVSVLDAHLN 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
            FQ D+AGRLEVQLTIIIEA+NDNAKAHASFSDSSFFL+F+G+KIAQL ADPFEVRKNSS
Sbjct: 61  KFQNDLAGRLEVQLTIIIEAENDNAKAHASFSDSSFFLYFIGMKIAQLKADPFEVRKNSS 120

Query: 121 VKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 171
           +KF YAVVS+SIPLNPEQME VD+DLKADLS F L GNTRVQWRVGLLGSV
Sbjct: 121 LKFHYAVVSDSIPLNPEQMEKVDNDLKADLSGFVLTGNTRVQWRVGLLGSV 171

[Close]

BLAST of Chy7G139320 vs. TAIR 10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.0 bits (458), Expect = 8.2e-46
Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 0


Query: 3   PKLISDAKRHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNF 62
           P+L S  +  T+PF+W AA++C ++SI VI+GGI+VF+GYLVIHPR+P IS+ DAHLD  
Sbjct: 2   PRLTS--RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFL 61

Query: 63  QIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSVK 122
           + DI G L+ QLTI+I  +NDNAKAHA F ++ F L + G  IA L A  FEV K  S+ 
Sbjct: 62  KYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPEFEVVKEKSMF 121

Query: 123 FPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSV 172
            PY V S  IPLNP  M++VD  +K D+  F+L G +R +WRVG LGSV
Sbjct: 122 LPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSV 168

[Close]

BLAST of Chy7G139320 vs. TAIR 10
Match: AT3G26350.1 (LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 9.8e-15
Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 11  RHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRL 70
           R TN   W AA  C +  + +I+GG+++ I YLV  PR P + I  A+L+   +D+   L
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSVKFPYAVVSN 130
              LTI+    N + K+   FS  +F L++    IA    +PF+V K +S+     +VS+
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSS 286

Query: 131 SIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLL 169
            + L   Q   +   ++      +L G    +  +G L
Sbjct: 287 QVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPL 324

[Close]

BLAST of Chy7G139320 vs. TAIR 10
Match: AT1G13050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 7.2e-10
Identity = 40/158 (25.32%), Postives = 71/158 (44.94%), Query Frame = 0


Query: 11  RHTNPFVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRL 70
           + T P    A + C ++ I +I+ G+++ + YL   PR P   I  A L+   +D+   L
Sbjct: 128 KRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSVKFPYAVVSN 130
              L +++   N + K+   FS   F L+F    IA    +PF V K  S+   + +VS+
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSS 247

Query: 131 SIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLL 169
            + +   Q + +   L       +L G    +  +G L
Sbjct: 248 QVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSL 285

[Close]

BLAST of Chy7G139320 vs. TAIR 10
Match: AT1G13050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 260 Blast hits to 259 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 38/149 (25.50%), Postives = 68/149 (45.64%), Query Frame = 0


Query: 20  AALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRLEVQLTIIIE 79
           A + C ++ I +I+ G+++ + YL   PR P   I  A L+   +D+   L   L +++ 
Sbjct: 5   ATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVN 64

Query: 80  AKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSVKFPYAVVSNSIPLNPEQM 139
             N + K+   FS   F L+F    IA    +PF V K  S+   + +VS+ + +   Q 
Sbjct: 65  FTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSSQVQIQMIQS 124

Query: 140 ESVDSDLKADLSRFDLIGNTRVQWRVGLL 169
           + +   L       +L G    +  +G L
Sbjct: 125 QDLQLQLGTGPVLLNLRGTFHARSNLGSL 153

The following BLAST results are available for this feature:

BLAST of Chy7G139320 vs.


Match Name	E-value	Identity	Description

BLAST of Chy7G139320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX91	5.7e-87	98.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1	[more]
A0A5A7TFZ2	2.7e-81	92.40	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3D1V8	2.3e-80	91.81	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BSH0	2.3e-80	91.81	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1	[more]
A0A6J1ETW1	1.6e-73	81.03	uncharacterized protein LOC111437517 OS=Cucurbita moschata OX=3662 GN=LOC1114375...	[more]

BLAST of Chy7G139320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649223.1	5.40e-117	98.30	hypothetical protein Csa_014865 [Cucumis sativus]	[more]
XP_004150550.1	8.12e-113	98.25	uncharacterized protein LOC101214190 [Cucumis sativus]	[more]
KAA0040179.1	2.38e-105	92.40	NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]	[more]
XP_008451870.1	3.94e-104	91.81	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >TYK16449.1 NDR1/HIN1-like p...	[more]
XP_038904240.1	4.89e-98	85.96	NDR1/HIN1-like protein 12 [Benincasa hispida]	[more]

BLAST of Chy7G139320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45320.1	8.2e-46	53.85	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G26350.1	9.8e-15	29.11	LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED ...	[more]
AT1G13050.1	7.2e-10	25.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13050.2	1.4e-08	25.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 7..172
None	No IPR available	PANTHER	PTHR31852:SF9	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 7..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G139320.1	Chy7G139320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane