Chy7G138790 (gene) Cucumber (hystrix) v1

Overview
NameChy7G138790
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein Iojap/ribosomal silencing factor RsfS
LocationchrH07: 15431149 .. 15434958 (-)
RNA-Seq ExpressionChy7G138790
SyntenyChy7G138790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTATCCACTACCTTATCTCTCCACGGCGCCGGCGCCGGAACCTTGTTTGGCGCTGAGCTCCGGCAATTGGGTCACGATTATTTCGGAGTTTTCAAAAGACCCAGAAAACAAATTTTCTGCTCATGTTGGAATGGGTCTCCATTTCCTTACCGAAACTGCCTTTGGAGGGTACCCTCGGTCAATAACTTCCATTTGAAGTCAATGGAGTCCTCGCCATTGTTCGCCGTCCGAGGAGAAGCTGAAGATGGATTTTTATCGGTATTTTCTTTTCATTTCCTTTGTTTGGAACTAACTTGAATTATGTTTCGTTAATGTATTTGGAATAGATTTCGTTCTTGTTACTAATTGATGTGTGGTTTCTGGGATTTCGTTGAGGCATAACTTGATTGATCGAAATCTTACCTTTTTTTTTGTTCCAAAATGGATGTTGTTTGCTAAAAGAAAAGAGGCCTCTCTCTTATCTTTCCTCTTTATTTTGGGAGCTGAAGCTACTTGGGATTATGGGAGGAACCTTATCTACTTGGAAGTCATTTGCAAAAAGAAAAAGAAGCTCACTTATCTCTCTCTCTTTGTATTTTTTTTCCTTTTCCACTGGTTGTTTGAATGCTGCAGCTCTTTGGGAATTGATAAGAACCTTGTCAAAATTAAGAAAGTTATTAGCAAAAACAACAGGAGCCCTTCTCCTTGGATCTGCTGGGGAAAAATATTCTCAAAATGAGAGTAACTTGCAAAAGAAAATTAGCCTCTCCATCTCTCTCTCTCATATTCCCTTTACTTTGATCTTTGGATGATGCAGCTGCCTGAGAGGAGCTTCATCAAATCGGAAGTTTCAAAAGAAAGGAGAAATCTGTCTCTCTTTTTCTCTCTTCTGTAGTTTTCATTGATAATGGTGGGATTGAGTTACTTTGAACTGTATTAAACATTCAGTATTGAGTACAGTGATTTAGCCTATGAGTCATACTTTATGTTTCTTTACTGGGTTCTAAATGATGCTTTTTGTAAAAAGGAAACAAGAAACCGAGGATTGAAGAGGCTGAATCCAAGACACTCTTTTGAATTGTTCTGGAACTTGTATGTTCATTTACTTCTGATCTTCATAGAAAAATCAAGTCATCATTATGTTTTCATTTTCAGACTCAAATTTAATTTGGATTTTGGTGTAAAGGAAAAAAAATACTAACCAAACCGATCTGTACTAACTCTCCATATCAATTTATTTTAAATGATTGCCTTAGGGTAAAGATCGTAATGGGTTCTATTACACATTCTAAATGTCTGATATTTTTGTTGCTGTTGCACATTACTGCAACTACTTACGATACTGTCAGACTCAAACTTAAATTTGGTATAAAGGAAAAAAACAAAACTAATCAAACTGGTCTGCACTAACTCTTGATATTAATTTATTTTAAATGATTGCCATAGGGTAGATATCTTGATGCATTTTATTGCGCATTTAAATGTCTGATGCTTTTATTGTCGTGAAGTACTGCATTTACTTGTGATATTGATCAACCCAGTCAATGATTTCTGGCAGAATATGAATGATGATACTGATGACATGTATGATGAATTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGACCAAAAGCCTCCTAGTGCAGAAATTGACGATGACGCGGAAAGCCTTTCATGTAAGTGAAGTCTCTTTGCATTAGCAAGATCAAGAATCAAACATAAGCATGTTGTGGACAAATCTGTTGTGTTCATGTGGTGATTTGCCTGCCAACTTCCTGCTTCATCTATGAGTATAATGAATAATTTTAGCCGATATATCTTAACTTGATATGGTTTCTAGTAGTGTTGTTAAGTATTTAAACGAAAGGAATGGAACAATCTTATCATTCTTTGGTTGAATCAATAACAGAAATGGGAAGTGGAATGGAAAAAATGATTTCCTTGGCATTTCCAGAGGTTTCTTTTCCCCTCTCATTTGATGTGAAATGGTTACATACAAATTACATGTCTATCCAAAAACAAGTGTAGATCCTCCAATCCACCTGGGCAGTCCTTTCAATTGGAGAGGTTGAGAGAATTCATATTCATTCTGAAGGGATTGAATAAGCCTTTTGGATGTGTACCATAGACAACAAAATAGCGAAAGAAAACAGTCTAAGGGCAGCGGAAGATGTGACCCCTCCTGTAGAAACTAAAAAACTGCTTTCCAGTAGTTTTGAATCAGTTAAAAATGAATTTTGTTTCTCACACGCCACCAGGACACTCTAAGCTGTACATTACTACAAAAAACCTCAAAGAGCAATCAAAGATAGAAAACAATAGGTATCTCAAGTATTCAACTTTTCAATAGGCAGAAAGCAAAAATTCACAAGCTATGGATGAACAATTAGTACATAAGTAACATACGTATTTTGTCCGATTATATTGTGAATTCAAAACTTCATTACATGGAATGATTGGTGAACTAATTTTCCAATGCTTATCTCTGTAGTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACAGCATTTTCTCGCCCTCAGATCGATGCTATTGGGTACTGCTGCCTTTTTGGTTTGTTGTCCTCTTATCGCTTGCAATAAGGAAATCTATATATGAAGGTTTTCCTTAAACTGGTGTTCAATTGTATTTTGCAATGCAGATCCCGGATAAGAGATCTTGCCGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGATGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGTATGCACTATTTGTATTTCACTTTGAAGATAAATGAGTGTTCCGTTAGAGATGATGGATGCACCAGAAACCTGGACAGTGAACCAATTAGAAAGAAACAACTTATGTTGAACTACTAATAGCTATACAAAAATACGTAGTATACCTAGAGGAAAAAAAACTCCTGAAATGATACCGTGAAAAGAAAACAAAGGGATCAGAGAACCAAAACGAGAAAAGAAAAAGGTTCATGTTGATGGGAATAAAAGAAAAAGGATACTAAAAGTGCATGTAAACAAAATTTTAAAATTTAGCCTTGTTGTCTATTAAAAGGTGCAACTTTGGTGTTAAGGGACTTGGAATGTTTGAATATATCCTTCTAGGTACTAGTTCAAGCTCTTTGGTGGATGTTTCTAAAAGCAGCTTTTAGAGTGAGCAAAATTTTTCTGAGATTTAGTAGTAGGGATGGATGATGAACTTAATGCAAGTAGTAAGGCCATTTGATTTGGTGGCATCCCATTTATATGAAAAAGGAATTGATGTATAAATGTCCACAGCGAAGATCTAAAGAGCATTAGATTTTAATCTCGTGAAGTACCAATGCTTCAATCTTTAAAAAAGACCATTTCAGATTAAGTCTACCAAAATGAAATGTGATTTTCCACCGATCAGAGCTCATCATTTAATATAGAGCGGATATGGCTTTGAGACCTCTTTGTGACTATAGGATCATTTCATCATCGCTTTATTATCGGTGTGCTATGCCTTTTTCCATATCATGCGTGAACTCCGTTTTGGAATTCAGTTAAGATATTAGTCCAAAATGTGCATCAATTGATCTTTGATACCGATGAACTAAGAAGTAAAGCAAATTGCTGTGATGTTTTTTGTTCTCAGGAGATGTGGTTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCGTTTTGA

mRNA sequence

ATGGCGTTATCCACTACCTTATCTCTCCACGGCGCCGGCGCCGGAACCTTGTTTGGCGCTGAGCTCCGGCAATTGGGTCACGATTATTTCGGAGTTTTCAAAAGACCCAGAAAACAAATTTTCTGCTCATGTTGGAATGGGTCTCCATTTCCTTACCGAAACTGCCTTTGGAGGGTACCCTCGGTCAATAACTTCCATTTGAAGTCAATGGAGTCCTCGCCATTGTTCGCCGTCCGAGGAGAAGCTGAAGATGGATTTTTATCGAATATGAATGATGATACTGATGACATGTATGATGAATTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGACCAAAAGCCTCCTAGTGCAGAAATTGACGATGACGCGGAAAGCCTTTCATTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACAGCATTTTCTCGCCCTCAGATCGATGCTATTGGATCCCGGATAAGAGATCTTGCCGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGATGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGAGATGTGGTTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCGTTTTGA

Coding sequence (CDS)

ATGGCGTTATCCACTACCTTATCTCTCCACGGCGCCGGCGCCGGAACCTTGTTTGGCGCTGAGCTCCGGCAATTGGGTCACGATTATTTCGGAGTTTTCAAAAGACCCAGAAAACAAATTTTCTGCTCATGTTGGAATGGGTCTCCATTTCCTTACCGAAACTGCCTTTGGAGGGTACCCTCGGTCAATAACTTCCATTTGAAGTCAATGGAGTCCTCGCCATTGTTCGCCGTCCGAGGAGAAGCTGAAGATGGATTTTTATCGAATATGAATGATGATACTGATGACATGTATGATGAATTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGACCAAAAGCCTCCTAGTGCAGAAATTGACGATGACGCGGAAAGCCTTTCATTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACAGCATTTTCTCGCCCTCAGATCGATGCTATTGGATCCCGGATAAGAGATCTTGCCGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGATGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGAGATGTGGTTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCGTTTTGA

Protein sequence

MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVPSVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSAEIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQRPF*
Homology
[Close]
BLAST of Chy7G138790 vs. ExPASy Swiss-Prot
Match: Q9LDY9 (Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.2e-77
Identity = 151/241 (62.66%), Postives = 180/241 (74.69%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MA ST L++    AG L   + R        + ++    + C        PY NC WR+ 
Sbjct: 1   MASSTGLTV----AGALLAGDFRLPAVSSL-IPRKTSSSLSCLSNRDLSSPY-NCCWRLS 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
                 L S+ +S  FAV  EAEDGFLSN+++DTD+M+D+LF KYG VVF+S D K P+A
Sbjct: 61  --RGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESL+FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+
Sbjct: 121 EVDDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYG+  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+
Sbjct: 181 RDLAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 233

Query: 241 Q 242
           Q
Sbjct: 241 Q 233

[Close]
BLAST of Chy7G138790 vs. ExPASy Swiss-Prot
Match: Q41822 (Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-57
Identity = 108/170 (63.53%), Postives = 131/170 (77.06%), Query Frame = 0 

Query: 77  AVRGEAEDGFLSNMN----DDTDDMYDELFKKYGNVVFKSNDQKPPSAEIDDDAESLSFA 136
           A R  ++    SN+N    DD D + ++L K++G VV+ S     P+ E DDDAE LSFA
Sbjct: 58  ACRARSQSASSSNVNFGRGDDADKLLEDLLKQHGEVVYSSGGPPDPTVEADDDAECLSFA 117

Query: 137 VSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSP 196
           VS+AK AS++KA DIRVL V+ LVYWTRFFII TAFS  QIDAI S++RD+ EK++ +  
Sbjct: 118 VSLAKAASEIKATDIRVLCVRRLVYWTRFFIILTAFSNAQIDAISSKMRDIGEKQFSKVA 177

Query: 197 SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQR 243
           SGD KPNSWTLLDFGDVV+HIFLPQQRAFYNLEEFYGNATP+ELPF+ QR
Sbjct: 178 SGDTKPNSWTLLDFGDVVVHIFLPQQRAFYNLEEFYGNATPIELPFDTQR 227

[Close]
BLAST of Chy7G138790 vs. ExPASy Swiss-Prot
Match: P73658 (Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsfS PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 0 

Query: 114 DQKPPSAEIDD----DAESLSFAV-SMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAF 173
           D  PP+  ++     DA +    V ++A+ A + KA D+ +L V  + Y   +F+I T F
Sbjct: 8   DAYPPTLTVNPIVPADAPATEHLVWTIAQAAEERKAGDLVILKVTDVSYLADYFVICTGF 67

Query: 174 SRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNS---WTLLDFGDVVIHIFLPQQRAFYNLE 232
           SR Q+ AI   I    E  +G+ P+   + NS   W L DFGDV++H F+P++R FY LE
Sbjct: 68  SRTQVRAIADNIEKQVELVHGQLPT-HTEGNSESIWVLQDFGDVLVHTFMPEEREFYKLE 127

[Close]
BLAST of Chy7G138790 vs. ExPASy Swiss-Prot
Match: Q97P97 (Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=rsfS PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 135 MAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRD-LAEKKY-GRSP 194
           + K A + +A DI  L V+ L   T + +I ++ +  Q+DAI + IR+ +A+  + G   
Sbjct: 10  VVKAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREKVAQAGFKGSHV 69

Query: 195 SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
            GD     W LLD G VV+HIF  + RA YNLE+ +  A  V++
Sbjct: 70  EGDA-AGGWVLLDLGAVVVHIFSEEMRAHYNLEKLWHEANSVDI 112

[Close]
BLAST of Chy7G138790 vs. ExPASy Swiss-Prot
Match: Q9KD89 (Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rsfS PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-09
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 0 

Query: 127 ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLA-E 186
           E L  AV+      D KA  +  L +K +     FF+I    S  Q+ AI   ++ +A E
Sbjct: 5   ELLQLAVN---AVDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKVAQE 64

Query: 187 KKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
           +          +   W L+D GDVV+H+F   +RA+YNLE+ +G+A  VEL
Sbjct: 65  QGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWGDAPTVEL 112

[Close]
BLAST of Chy7G138790 vs. ExPASy TrEMBL
Match: A0A0A0KVG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 5.7e-138
Identity = 241/244 (98.77%), Postives = 243/244 (99.59%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           SVNNFHLKSMESSPLFAV GEAEDGFLSNMND+TDDMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. ExPASy TrEMBL
Match: A0A5D3CY15 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001790 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.6e-134
Identity = 234/244 (95.90%), Postives = 240/244 (98.36%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFG EL QLGH+YFGVF+RPRKQIFCSCWNGSPFPYRNC+WRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFCSCWNGSPFPYRNCIWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNF+LKS+ESSPLFAVRGEAEDGFLSNMNDDT+DMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRS SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSSSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. ExPASy TrEMBL
Match: A0A5A7V7J6 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00520 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133
Identity = 234/244 (95.90%), Postives = 240/244 (98.36%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFG EL QLGH+YFGVF+RPRKQIF SCWNGSPFPYRNC+WRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNF+LKS+ESSPLFAVRGEAEDGFLSNMNDDT+DMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. ExPASy TrEMBL
Match: A0A6J1FNP0 (protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.6e-122
Identity = 214/244 (87.70%), Postives = 228/244 (93.44%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALS  LSLHGAGAGT FG + RQLGHDYFGV  RPRKQ +CSCWNGS F  +NC+W++P
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSQNCIWKIP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNFHLKSMESSPLFAV  EAED FLSNMN+DTDDMYD+LFKK+G+VVFK +DQKPP+A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]
BLAST of Chy7G138790 vs. ExPASy TrEMBL
Match: A0A6J1IZC7 (protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.2e-121
Identity = 214/244 (87.70%), Postives = 226/244 (92.62%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALS  LSLHGAGA T FG E RQLGHDYF V  RPRKQ +CSCWNGS F  RNC+W++P
Sbjct: 1   MALSIVLSLHGAGAVTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S +NFHLKSMESSPLF+V  EAED FLSNMN+DTDDMYD+LFKK+GNVVFK NDQKPP+A
Sbjct: 61  SSHNFHLKSMESSPLFSVGKEAEDSFLSNMNEDTDDMYDDLFKKHGNVVFKRNDQKPPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]
BLAST of Chy7G138790 vs. NCBI nr
Match: XP_004147757.1 (protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein Csa_014809 [Cucumis sativus])

HSP 1 Score: 496 bits (1277), Expect = 4.29e-177
Identity = 241/244 (98.77%), Postives = 243/244 (99.59%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           SVNNFHLKSMESSPLFAV GEAEDGFLSNMND+TDDMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 244
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. NCBI nr
Match: TYK16385.1 (Oligomerization domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 483 bits (1242), Expect = 9.30e-172
Identity = 234/244 (95.90%), Postives = 240/244 (98.36%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFG EL QLGH+YFGVF+RPRKQIFCSCWNGSPFPYRNC+WRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFCSCWNGSPFPYRNCIWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNF+LKS+ESSPLFAVRGEAEDGFLSNMNDDT+DMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRS SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSSSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 244
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. NCBI nr
Match: KAA0062957.1 (Oligomerization domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 481 bits (1238), Expect = 3.79e-171
Identity = 234/244 (95.90%), Postives = 240/244 (98.36%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFG EL QLGH+YFGVF+RPRKQIF SCWNGSPFPYRNC+WRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNF+LKS+ESSPLFAVRGEAEDGFLSNMNDDT+DMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 244
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. NCBI nr
Match: XP_038876545.1 (protein Iojap, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 470 bits (1209), Expect = 1.00e-166
Identity = 229/244 (93.85%), Postives = 234/244 (95.90%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFG ELRQLGHD F V KRPRKQ FCSCWNGSPFP +NC+W +P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELRQLGHDNFRVSKRPRKQNFCSCWNGSPFPNQNCIWGMP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNFHLKSME SPLFAV GEAEDGFLSNMNDDTDDMYD+LFKK+GNVVFKSNDQKPPSA
Sbjct: 61  SANNFHLKSMECSPLFAVEGEAEDGFLSNMNDDTDDMYDDLFKKFGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 244
           QRPF
Sbjct: 241 QRPF 244

[Close]
BLAST of Chy7G138790 vs. NCBI nr
Match: XP_023524638.1 (protein Iojap, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447 bits (1151), Expect = 6.93e-158
Identity = 216/244 (88.52%), Postives = 228/244 (93.44%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALS  LSLHGAGAGT FG + RQLGHDYFGV  RPRKQ +CSCWNGS F  RNC+W++P
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNFHLKSMESSPLFAV  EAED FLSNMN+DTDDMYD+LFKK+G+VVFK NDQKPP+A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRNDQKPPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 244
           Q+PF
Sbjct: 241 QQPF 244

[Close]
BLAST of Chy7G138790 vs. TAIR 10
Match: AT3G12930.1 (Lojap-related protein )

HSP 1 Score: 289.3 bits (739), Expect = 3.0e-78
Identity = 151/241 (62.66%), Postives = 180/241 (74.69%), Query Frame = 0 

Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MA ST L++    AG L   + R        + ++    + C        PY NC WR+ 
Sbjct: 1   MASSTGLTV----AGALLAGDFRLPAVSSL-IPRKTSSSLSCLSNRDLSSPY-NCCWRLS 60

Query: 61  SVNNFHLKSMESSPLFAVRGEAEDGFLSNMNDDTDDMYDELFKKYGNVVFKSNDQKPPSA 120
                 L S+ +S  FAV  EAEDGFLSN+++DTD+M+D+LF KYG VVF+S D K P+A
Sbjct: 61  --RGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESL+FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+
Sbjct: 121 EVDDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYG+  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+
Sbjct: 181 RDLAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 233

Query: 241 Q 242
           Q
Sbjct: 241 Q 233

The following BLAST results are available for this feature:
BLAST of Chy7G138790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LDY94.2e-7762.66Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1[more]
Q418222.1e-5763.53Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1[more]
P736582.2e-1437.30Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ... [more]
Q97P973.4e-1036.54Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain A... [more]
Q9KD893.7e-0934.23Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DS... [more]
BLAST of Chy7G138790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVG55.7e-13898.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1[more]
A0A5D3CY156.6e-13495.90Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5A7V7J61.9e-13395.90Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A6J1FNP02.6e-12287.70protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 ... [more]
A0A6J1IZC72.2e-12187.70protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV... [more]
BLAST of Chy7G138790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147757.14.29e-17798.77protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein ... [more]
TYK16385.19.30e-17295.90Oligomerization domain-containing protein [Cucumis melo var. makuwa][more]
KAA0062957.13.79e-17195.90Oligomerization domain-containing protein [Cucumis melo var. makuwa][more]
XP_038876545.11.00e-16693.85protein Iojap, chloroplastic isoform X2 [Benincasa hispida][more]
XP_023524638.16.93e-15888.52protein Iojap, chloroplastic [Cucurbita pepo subsp. pepo][more]
BLAST of Chy7G138790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12930.13.0e-7862.66Lojap-related protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 135..228
e-value: 1.3E-20
score: 71.4
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 1..243
IPR004394Protein Iojap/ribosomal silencing factor RsfSHAMAPMF_01477Iojap_RsfScoord: 126..229
score: 18.436813
NoneNo IPR availablePFAMPF02410RsfScoord: 135..228
e-value: 4.5E-20
score: 71.9
NoneNo IPR availablePANTHERPTHR21043:SF2PROTEIN IOJAP, CHLOROPLASTICcoord: 1..243
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 128..237
e-value: 1.5E-23
score: 84.7
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 129..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G138790.1Chy7G138790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090071 negative regulation of ribosome biogenesis
biological_process GO:0017148 negative regulation of translation
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0043023 ribosomal large subunit binding