Chy7G137530 (gene) Cucumber (hystrix) v1

Overview
NameChy7G137530
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 13173886 .. 13174306 (-)
RNA-Seq ExpressionChy7G137530
SyntenyChy7G137530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGTTAAGTTCAAAAGTTCTTACGATGAAAACGTTATAGCAAAACTCTTCAAGATTATCAAGGATTCCGAAGAGCACAAGGCTCCAACAAATAAGGAAATAAAAAGTATCCAGTTTCAAAACAATTATTCCAATAGAACACTTTCTTCAATTGCCGGTCAAGTATTCAAGCTAGAAGAAATCTTTAACCCACCTACTCTTGAAGAAACTCCTAACCTTTTTCAACCTTTAGAAAAGTTGAAGATAAAAACTCAAAAAAAAAAAAACTTTTGGATGAAATTAACAAATGCCTTAATAACTAAAGGGTGAGAGTTCGATATCTCAACGAAGAAGATGCAGCTCAATTCATAGAAGATTTTAAAAATATTTCCGTCAATGAAGAAGAAAATCAAATCAATAAGATAAATTTTGGAAA

mRNA sequence

ATGGAAGATGTTAAGTTCAAAAGTTCTTACGATGAAAACGTTATAGCAAAACTCTTCAAGATTATCAAGGATTCCGAAGAGCACAAGGCTCCAACAAATAAGGAAATAAAAAGTATCCAGTTTCAAAACAATTATTCCAATAGAACACTTTCTTCAATTGCCGGTCAAGTATTCAAGCTAGAAGAAATCTTTAACCCACCTACTCTTGAAGAAACTCCTAACCTTTTTCAACCTTTAGAAAAGTTGAAGATAAAAACTCAAAAAAAAAAAAACTTTTGGATGAAATTAACAAATGCCTTAATAACTAAAGGGTGAGAGTTCGATATCTCAACGAAGAAGATGCAGCTCAATTCATAGAAGATTTTAAAAATATTTCCGTCAATGAAGAAGAAAATCAAATCAATAAGATAAATTTTGGAAA

Coding sequence (CDS)

ATGGAAGATGTTAAGTTCAAAAGTTCTTACGATGAAAACGTTATAGCAAAACTCTTCAAGATTATCAAGGATTCCGAAGAGCACAAGGCTCCAACAAATAAGGAAATAAAAAGTATCCAGTTTCAAAACAATTATTCCAATAGAACACTTTCTTCAATTGCCGGTCAAGTATTCAAGCTAGAAGAAATCTTTAACCCACCTACTCTTGAAGAAACTCCTAACCTTTTTCAACCTTTAGAAAAGTTGAAGATAAAAACTCAAAAAAAAAAAAACTTTTGGATGAAATTAACAAATGCCTTAATAACTAAAGGGTGAGAGTTCGATATCTCAACGAAGAAGATGCAGCTCAATTCATAGAAGATTTTAAAAATATTTCCGTCAATGAAGAAGAAAATCAAATCAATAAGATAAATTTTGGAAA

Protein sequence

MEDVKFKSSYDENVIAKLFKIIKDSEEHKAPTNKEIKSIQFQNNYSNRTLSSIAGQVFKLEEIFNPPTLEETPNLFQPLEKLKIKTQKKKNFWMKLTNALITKG*EFDISTKKMQLNS*KILKIFPSMKKKIKSIR*ILEX
Homology
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BLAST of Chy7G137530 vs. NCBI nr
Match: XP_023520850.1 (uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 53.5 bits (127), Expect = 4.92e-05
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0 

Query: 1   MEDVKFKSSYDENVIAKLFKIIKDSEEHKAPTNKEIKSIQFQNNYSNRTLSSIAGQVFKL 60
           +E+V+F + Y E V A  FK I +  E   PT K+IK+IQ QNNYSN+ LS+IA Q+  +
Sbjct: 104 LEEVEFDNYYGEKVKASPFKHIPEGLEKGNPTLKDIKNIQHQNNYSNKILSTIATQLESI 163

The following BLAST results are available for this feature:
BLAST of Chy7G137530 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G137530 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G137530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023520850.14.92e-0549.18uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo][more]
BLAST of Chy7G137530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G137530.1Chy7G137530.1mRNA