Chy7G136580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G136580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	polyadenylate-binding protein 2-like
Location	chrH07: 10564936 .. 10571014 (+)
RNA-Seq Expression	Chy7G136580
Synteny	Chy7G136580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCATTGATTATCCGAATTATCATTCGAATATGAAATCTGCTTTTATTTTGTAGTGGTTTGAGCAAACTATTACGCTTAGATTCATAAGCCCGTTCGATGTTCTTTAAAAAAGAAAATCAAAACCTCCTTAATGTGCAACAAAATTAGCACACACGCTTGGATTCATTTTATCTGCGGAACTCAGAGGGTCGGTTGGAGTTTGGATTCAACTACTGGGGGCAGGAAAGTTGATATTGGACTTTGCTTGGTTGTAGAGGCTTGAAGCGTTGTTGGAGGATTTAATGTGCAATTGAGTGGGAGTGGTCTACTAATAACCCTCTCATTGAAGTTGAATTTGATGGATGATGTTTTTATTGAGATGGAGATTTCCTTCAGTTGAAACCATGGTCAATATTGTACAATTTTGGGAATAAATATGTTTATTTCATTGCAACTTTAGCCTCCTCTCAAGAATTATTTTTTAATCTGTCAAAATGATTTTCCAGATTCTGTCCCTCATTGTTTGATTTGGAATTAGATTATTTGTAAGCAATTATGGAAGAGTATTGTTTTTTAGAGGAATGGAGAGAGTCATTTCTCGTGATGTTTGGTTTAGTGTTAAGTTCCATGTGTCCTTTTGTAATTATTTTTTAGAAATATTTTAACTAATTGATCTTCCCTTGCCAAATATAACAAAATGTGAAAAGAATTTTAGTGTAGATCATATCGATAAAACGAAATATTTTTCTTTATTTACAATACAATATATAATTATATCTTTAATTATTGGTTTTAAATTACTGCTCATTTCAATTACACAACCTTAAGCAAGTAAATAATTGCTTCTAATGAAACTAATGGACTAATCATTTATTTAATTTAGAAAAGGAAAGCCTATTTTCAATAAATAAATATAGTAAAAACTAAATTAAATTACAAACTCCCATTCAACTTTACATTTTGTATCTACTTGTTGCTTAAAAAATTTATGTTTTGTTTAAACAAATTATGGATCTTGTTCCAAAATTTAAATTCTAGGAATTTATTAATACTTTTAAAGTTTATATATCAAATCCATAAAAACAAACCCAGAGTTAAAATACCATTTTTAAATTTGTTTATTGTTAGTTAGTATTAGAAAAAAAATCTTAAGCTATTTTTATTAAAATTGATTAAATAATAATAAATAATTTTTTAATGCTAGAAGATACATGTGAATTGGTTTTTAAATCGCAATTAAAAAAACAACAGGCTAAATATAAGATATTATTCAATGTTTAAAAAAAAATACTAAAACTAAAACAAGTAATTTCAATTATTAGAACGAAAAAGACATTTAAAAAAATCAAAACAGAACTACGATTCATTAGAAGGGTAAAAAATGTTGAAAATATTTACAAAACTTTTATTAATAATAGAAATCTATAAAGGTAAATTTTTGTTATCTATTTAAAAGCATGTTTGAATAAAATATTTACAACGTATAGCAAAATTTTTAGATTCTATCATAAATAAACACTTATATGCTTCTATATATGATACTCATAGATAGTAATAAAAATTTATTAGTTTTTATCTGGATAGAATTCAAAAATTTTGGTATAGTTTTTAAATAATTTAATTTATTTTTGTTATTTTTAAGAACACTTCTGATCTAATTAATATTAAAAAGAACGAAAACAAAAGTTGTTAATTGTAATTTAGTTGCATATATGATTGTAATATCAATCAATCTTATAAATAAGTATGTTCACAAAAGAAGAAAAAAAACACACACATATATATATAAAAGGAAATAATAAAAAGGAAAAGGAAAATGTGTAAAAATAAAGGAGCCGGTTTGAACCCGAAGTTACTGTAACTCCCTTTGAGAGAAAGGGGAGAGATAGATAGAGAGAGAGAGGAAAGAGACGAAGGGGCGGTGGACGGAGGAGGGAGGAGAACCAATGGAGCACGACGACGTCGACATGATTGGCTCCGACACAAACGACGCTGTGGTTCCTTTCCTTTTTCTTCTCTTTCAATTCCTTTCCCTATTCTTCTTCCTCTTCTTTTTCTTCTTCTTCATTTATAAACCCTAATTTCTCTCCTCCCTTTTTTTCCTCTCAGGAGTTGGACGACATGAAGAAGCGGTTAAAAGACATGGAAGACGAAGCTGCTGCTCTACGTGAGATGCAGGCGAAGGTCGAGAAGGAAATGAGTTCTGTACAAGGTTGCTTTCGCCCCTGCTCCCTATTACTTTTCTATTTTTCCCACCATCTCCTTCACATATGGAATCCGTCTTATTTTCTTAATTTTTTAATTTCTAACTTCAGTTTTTGTGCTGGAGTTGTTTTTTTTTTTTCATTATTATTATTATTATTATTGTCATTATTATTATTCTGAATGTCGTCTTTTGATCCAATGCAACTCGAAAATGTTAAGGAAATGTCTACATTTTGGAGGAAAGGCGCATTTGGATCTAATGCGAAAAACTGGACCTTGTACTTGAATTTCTTATTGTTCCAATTCATTAACTCTGAGAGATTAGGAGAAGTTTGCTAGTTCCTTTTGCTGTTTGATTAAAAAAGAATGCCTTAGTTTGTGCCTGTGCCATTATGGTGACTTCATCTCTCGTACAAAAGAAGTTCTATCTGTCTGTTACCGTTAAACATTCGTCCATTTTTTGTACTATCAGATCCTGCAAGTGCTGCTGCAAATCAAGCAAATAGGGAGGAGGTGGATTCACGGTCAGTTTTTGTTGGCAATGTACGATCTCTTTATCCTTCACCAAATATTACATTCTTTTTTTTCATATTTATCCAGTCGCTTGCTTTGGTCACACAATTAGTTTGATTTATTGGGTGAAGGGACTGTCTCTGTTCATGTTAAATTCTTGAACAATATCAGCTTTTGTTGTTGTCCAGAGACTTAACTTACCTGGAGGCTATATGTTTCCATTTAATTAATAACGAACTGTTTCTTATTTATATACAACAATGACAATGGAAGGCTTTTTTTTTCTTTTTCTTTTTTCTCGTGCTTTGTTGGCATAGAGGGTCGATTTCCAGTACTTGTACTTTCTTTTGTAAAATAACCACTTGTGCAGTTGGTTTTTAATTTTTTATTAGAATTCATCCATCAATTTATCAATCTTTAGTAGCTTCTGGAGGAACCTTTTCCAATTTTCTTAGTCCCATTGTTTGAAATAACTTCAGCATTATGTCCTAACTGTTTGCACTACCTTCTAGTTTTATTGGATTTGTTGTTTCTATTTAATTCCTTCATCATGAAGGGAATCTTAAGTGGCTCTTCTTTAGCCTTTTCTTTTATTAATCTTCAGCCTTTTCTTTTGCTCCGTGAATTTCGTATGATGAATGGGGCAATCTTATTATTGATGTATTTATTAACCTTTCTTATTTTAAGTGGACTGAAGTTATTAGTAACTGCTAACTGGAGGTAATGGGTGACTTACTCAAGAGATGTATTCTTTGTTAAATAATAGAGATAACTTTTTGAGCATGATTTTCAGTTTTCTTTTAGAGTTACTTTTTGATTCTTGACATGGATTAAGATTGCACTGTCTAATTTTCATTGGTCATGTGGTCATAAAGATTTATTAAATTTTAGTTAGATATGATTTGTTCCTTTTGGTTAGTATCATTCATGGCTTGGGAAGAGGTTGTGTTATGCTTTCCATTTTGAGGATGTTGAAGTGGTTGGATGCATTGAAATGTTAGGAGGGATCGTTTGGCTATTATATATTGTCATGCCTCTTAAGAACATTGAGTATAAACCACTATTAGGAATATTTTCTCAATAGATTATCCTGTACAATGCAGATGGTTACATTTTAAATTTTATGACCCATTTATGCTCTGTGCTTGAAATTTGAGTATATGTTGGTGTTTTTAGCCTGATTTGACTTCCGTCTTTGACTGCAATTACAGGTTAGGCTTACTTCATCAGGTTTTCTGATTACCTATTGCTGAAGTCGGATATTCTCTTATATGTTATAAAGATAGCTATTTAGTATATTAAAAAAAAAAGTGTCTTGTCCCAAAAGAAAGAAGAGATTAAAAAAATGATAAAATCAAGAAGGATAAGGTGTATCATTTTCAAGAGGTTAACAGTTTTGGTTGAATCTTTTGAAAAGGGTGATGCAAGAAAATTGTTGAGATCAGTTAACAAGAGAAAGTATGCCTAAATGTCTAGTAGTTCATGTCCTATGTGGGCTCAGACTTAGTCAATCTATAACATGTCTCAAGTTTGAGGCCATGTGGGTAATGTGGGAAAGGAGTTATTAAAAAAAACAGAGGGAAAAAGAGGAATAGACTCACCAGCATAGAAAAGTGTATGTGTGACTATGGATAAGGTCAGCAGAAGTTTTTCTGGCTTGCTTGATTGAACTGGAATGGAGAGGGCTTGCAAGTTTTGAAGGGAAGTAATGTGCATTCACAACTAAGGAAGACTAGCTGTTGCGCTGAGGTATGTTATTGTCTTGTGTTGAAGCCAGCATTTGTGACCACTGTTCGAGGATTGTTTAAGTGATTTACAATTTATGGTGAGAGACCTCCAAATATCTCTGATTTTCCTCTCTTCCTTCCTTAATCCTTCAAGGAAAGGAAAAAAACGTAAATAGGGAAGCTTTTATGCCTATTTCTACTTGTGGGAAATTTTCATTTTTTTACCTTCGTAAATAGCCCCCATTCAGTCAATTTTAGCTTTGAAGTTTTAGATTCATCAAATTAAACTCCAGGTTCGTATAGGTTATAAAATTAATACCTTCCCTGATATAAATTAGAAGAATCTTAAATAACTAACTAATAAATTATTCAAAATCTAACCAACCAACCCAAAGTACTGCCCAGAAAAAATCTAGAAACCAATCCAATGAAAAGACATTCCTGCTCAGCAATTAGCAATTATAAATGGTCTTTTTCTCCAATCACAAGGCCCCGCACTTCAACCTTAAATCTCAAAAACAAAGAAAAAGAAGACTGACACAGGGTTTTAATTTGAACTTATATTCAGTTTCAGTTGGATGAAATTAAGATTTAAAAATTAAATTGGAGTCATTCAGTTAAGTACCAGGGTAAGATTGTTTTTCTGTTGTTTTAGTAGGAGAAATATCCCCCCTTACCATGGCCATGGGTCACAAGAACTATTGTTCATCTAGGTTCTTACAAGAGAACAAATATGGTGAATTTCTCATGAATGAGTGTCCGCATTTGGAATTAGAAGAGGGGGCCTATTATTGTGAAAGATTGGGACATGACCTTTTCCTTGATTAATTAAATTTTGTTTCCAGTTTATTACAGGGTGATGTACTATCACAATGATTATGAAAATGCTTGCCTTATTTTATCGATTAAAATATTTGGGAGATTTATATTGTACTGATGTTGATATAATATAAGTTAACTAATAGACATGAACTGTGCAAGTCCTATTTTCTTGGTTTTTCTGTGGTATGACAAATGTTTTGAGCTGCATTTGTAACAGGTTGACTACTCATGTACACCAGAAGAAGTACAGCAACTTTTCCAGTCATGCGGAACTGTAAACAGAATCACTATTCGCACTGATAAGTTTGGGCAACCGAAGGGTTATGCATATGTTGAATTTGTTGAGCCAGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAATCAGAACTGCATGGTCGGCAGCTTAAGGTTAATATAATATTTAGATATCTTGATTATTGTGTGCTTATTATATATTACTTGGTTAAAAAGAAAAAAACATGATCTTTTTATATATTACTTGATTAGTGTGTGTTTAAGATTCTTCTAGTGAATTATGCACACTTAAGCATGTTGCAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGTGCACGATCCAGGAGTCCATATGTTGCTCCTTATTTCTTCTCACCATATGGATACGGGTATGACTGGTGAATAAAAATTTCCAATGCAAACAGCTTGAATCTCATGCTTCTCATCATAGTCATTTAGCATAGTTCTATCTGTTGCAGGAAAGTCCCGAGGTTCAGAATGCCAACGCGTTATGGCCCCTACTATTGA

mRNA sequence

ATGGATGAGTTGGACGACATGAAGAAGCGGTTAAAAGACATGGAAGACGAAGCTGCTGCTCTACGTGAGATGCAGGCGAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCTGCAAGTGCTGCTGCAAATCAAGCAAATAGGGAGGAGGTGGATTCACGGTCAGTTTTTGTTGGCAATGTTGACTACTCATGTACACCAGAAGAAGTACAGCAACTTTTCCAGTCATGCGGAACTGTAAACAGAATCACTATTCGCACTGATAAGTTTGGGCAACCGAAGGGTTATGCATATGTTGAATTTGTTGAGCCAGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAATCAGAACTGCATGGTCGGCAGCTTAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGTGCACGATCCAGGAGTCCATATGTTGCTCCTTATTTCTTCTCACCATATGGATACGGGAAAGTCCCGAGGTTCAGAATGCCAACGCGTTATGGCCCCTACTATTGA

Coding sequence (CDS)

ATGGATGAGTTGGACGACATGAAGAAGCGGTTAAAAGACATGGAAGACGAAGCTGCTGCTCTACGTGAGATGCAGGCGAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCTGCAAGTGCTGCTGCAAATCAAGCAAATAGGGAGGAGGTGGATTCACGGTCAGTTTTTGTTGGCAATGTTGACTACTCATGTACACCAGAAGAAGTACAGCAACTTTTCCAGTCATGCGGAACTGTAAACAGAATCACTATTCGCACTGATAAGTTTGGGCAACCGAAGGGTTATGCATATGTTGAATTTGTTGAGCCAGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAATCAGAACTGCATGGTCGGCAGCTTAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGTGCACGATCCAGGAGTCCATATGTTGCTCCTTATTTCTTCTCACCATATGGATACGGGAAAGTCCCGAGGTTCAGAATGCCAACGCGTTATGGCCCCTACTATTGA

Protein sequence

MDELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVDYSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY*

Homology

[Close]

BLAST of Chy7G136580 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-74
Identity = 141/179 (78.77%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELD+MKKRLK+MEDEAAALREMQAKVEKEM + QDPAS AANQA +EEVD+RSVFVGNVD
Sbjct: 42  ELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVD 101

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQQ FQ+CGTV+R+TI TDKFGQPKG+AYVEFVE EAVQEAL LNESELHGRQ
Sbjct: 102 YACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 161

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY 182
           LKV  KRTN+PG+KQ+R RR NP+MG R R P+++PY +SPYGYGK PRFR P RY PY
Sbjct: 162 LKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

[Close]

BLAST of Chy7G136580 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.1e-73
Identity = 138/179 (77.09%), Postives = 154/179 (86.03%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           EL +MK+RLK+ME+EAAALREMQAKVEKEM + QDPAS AANQ  +EEVD+RSV+VGNVD
Sbjct: 38  ELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVD 97

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQ  FQ+CGTVNR+TI  DKFGQPKG+AYVEFVE EAVQEAL LNESELHGRQ
Sbjct: 98  YACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 157

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY 182
           LKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYGK PRFR P RY PY
Sbjct: 158 LKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

[Close]

BLAST of Chy7G136580 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.3e-62
Identity = 122/179 (68.16%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           +L+DMKKR+K++E+EA ALREMQAK EK+M + QDP S   + A +EEVDSRS++VGNVD
Sbjct: 53  DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDP-SGGVSAAEKEEVDSRSIYVGNVD 112

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQQ FQSCGTVNR+TI TDKFGQPKG+AYVEFVE EAVQ +L+LNESELHGRQ
Sbjct: 113 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQ 172

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY 182
           +KV+AKRTN+PGM+Q+R  R  PF   R   P V   F+ PY YG+VPRFR P RY PY
Sbjct: 173 IKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP--FYPPYAYGRVPRFRRPMRYRPY 227

[Close]

BLAST of Chy7G136580 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           EL +MK+R+ +ME EAA LR MQ +++ E  ++++         ++E +D++SV+VGNVD
Sbjct: 13  ELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKESIDAQSVYVGNVD 72

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKF-GQPKGYAYVEFVEPEAVQEALLLNESELHGR 122
           YS TPEE+Q  F SCG+VNR+TI  DKF G PKG+AY+EF EP  V  ALLLN S LH R
Sbjct: 73  YSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHER 132

Query: 123 QLKVTAKRTNIPGMKQYRPR-----RSNPFMGARSRSPYVAPY 160
            LKVT KRTN+PGM + R R     R     G R R+   APY
Sbjct: 133 PLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAPY 166

[Close]

BLAST of Chy7G136580 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29
Identity = 81/192 (42.19%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAA---ANQANREEVDSRSVFVG 62
           EL+ +K R+++ME+EA  L+E+Q +VEK+M+    P +A     +   + E D+RS++VG
Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVG 168

Query: 63  NVDYSCTPEEVQQLFQSCGTVNRITIRTDKF-GQPKGYAYVEFVEPEAVQEALLLNESEL 122
           NVDY  T EE++  F  CG+VNR+TI  DKF G PKG+AY+EF + E+V+ +L L+ES  
Sbjct: 169 NVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLF 228

Query: 123 HGRQLKVTAKRTNIPGMK---------QYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKV 182
            GRQ+KV  KRTN PG+          +YR R S+      SRS + + Y   P G    
Sbjct: 229 RGRQIKVVPKRTNRPGISTTDRGFPRARYRARASS----YSSRSRFYSGYTPRPRGRVYR 288

[Close]

BLAST of Chy7G136580 vs. ExPASy TrEMBL
Match: A0A5A7V2R3 (Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00160 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. ExPASy TrEMBL
Match: A0A0A0KXZ1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G110060 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. ExPASy TrEMBL
Match: A0A1S3CHX7 (polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501153 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. ExPASy TrEMBL
Match: A0A6J1CGQ3 (polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011513 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 175/180 (97.22%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVD+RSVFVGNVD
Sbjct: 18  ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. ExPASy TrEMBL
Match: A0A1S3CIE7 (polyadenylate-binding protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501153 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 178/185 (96.22%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTR 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG     KVPRFRMPTR
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGSICCRKVPRFRMPTR 197

[Close]

BLAST of Chy7G136580 vs. NCBI nr
Match: XP_004137160.1 (polyadenylate-binding protein 2 isoform X4 [Cucumis sativus])

HSP 1 Score: 348 bits (892), Expect = 3.06e-120
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 17  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 76

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 77  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 136

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 137 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 196

[Close]

BLAST of Chy7G136580 vs. NCBI nr
Match: XP_008462875.1 (PREDICTED: polyadenylate-binding protein 2-like isoform X2 [Cucumis melo] >KAA0061167.1 polyadenylate-binding protein 2-like isoform X2 [Cucumis melo var. makuwa] >TYK29930.1 polyadenylate-binding protein 2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 348 bits (892), Expect = 3.17e-120
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. NCBI nr
Match: XP_038877304.1 (polyadenylate-binding protein 2-like [Benincasa hispida])

HSP 1 Score: 348 bits (892), Expect = 3.17e-120
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. NCBI nr
Match: XP_011653388.1 (polyadenylate-binding protein 2 isoform X3 [Cucumis sativus] >KGN53719.1 hypothetical protein Csa_015373 [Cucumis sativus])

HSP 1 Score: 348 bits (892), Expect = 3.17e-120
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVDSRSVFVGNVD
Sbjct: 18  ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. NCBI nr
Match: XP_022140995.1 (polyadenylate-binding protein 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 344 bits (882), Expect = 1.06e-118
Identity = 175/180 (97.22%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAA+QANREEVD+RSVFVGNVD
Sbjct: 18  ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVD 77

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           YSCTPEEVQQ FQSCGTVNRITIRTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQ
Sbjct: 78  YSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQ 137

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 182
           LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Sbjct: 138 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 197

[Close]

BLAST of Chy7G136580 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.0e-75
Identity = 141/179 (78.77%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           ELD+MKKRLK+MEDEAAALREMQAKVEKEM + QDPAS AANQA +EEVD+RSVFVGNVD
Sbjct: 42  ELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVD 101

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQQ FQ+CGTV+R+TI TDKFGQPKG+AYVEFVE EAVQEAL LNESELHGRQ
Sbjct: 102 YACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 161

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY 182
           LKV  KRTN+PG+KQ+R RR NP+MG R R P+++PY +SPYGYGK PRFR P RY PY
Sbjct: 162 LKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

[Close]

BLAST of Chy7G136580 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-74
Identity = 138/179 (77.09%), Postives = 154/179 (86.03%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           EL +MK+RLK+ME+EAAALREMQAKVEKEM + QDPAS AANQ  +EEVD+RSV+VGNVD
Sbjct: 38  ELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVD 97

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQ  FQ+CGTVNR+TI  DKFGQPKG+AYVEFVE EAVQEAL LNESELHGRQ
Sbjct: 98  YACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 157

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY 182
           LKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYGK PRFR P RY PY
Sbjct: 158 LKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

[Close]

BLAST of Chy7G136580 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 255.0 bits (650), Expect = 4.6e-68
Identity = 128/165 (77.58%), Postives = 144/165 (87.27%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           EL +MK+RLK+ME+EAAALREMQAKVEKEM + QDPAS AANQ  +EEVD+RSV+VGNVD
Sbjct: 38  ELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVD 97

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQ  FQ+CGTVNR+TI  DKFGQPKG+AYVEFVE EAVQEAL LNESELHGRQ
Sbjct: 98  YACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 157

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG 168
           LKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYG
Sbjct: 158 LKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 202

[Close]

BLAST of Chy7G136580 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 238.4 bits (607), Expect = 4.5e-63
Identity = 122/179 (68.16%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAANQANREEVDSRSVFVGNVD 62
           +L+DMKKR+K++E+EA ALREMQAK EK+M + QDP S   + A +EEVDSRS++VGNVD
Sbjct: 53  DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDP-SGGVSAAEKEEVDSRSIYVGNVD 112

Query: 63  YSCTPEEVQQLFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQ 122
           Y+CTPEEVQQ FQSCGTVNR+TI TDKFGQPKG+AYVEFVE EAVQ +L+LNESELHGRQ
Sbjct: 113 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQ 172

Query: 123 LKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY 182
           +KV+AKRTN+PGM+Q+R  R  PF   R   P V   F+ PY YG+VPRFR P RY PY
Sbjct: 173 IKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP--FYPPYAYGRVPRFRRPMRYRPY 227

[Close]

BLAST of Chy7G136580 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 217.6 bits (553), Expect = 8.2e-57
Identity = 119/216 (55.09%), Postives = 146/216 (67.59%), Query Frame = 0


Query: 3   ELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQ-------------------------- 62
           +L+DMKKR+K++E+EA ALREMQAK EK+M + Q                          
Sbjct: 53  DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNL 112

Query: 63  -----------DPASAAANQANREEVDSRSVFVGNVDYSCTPEEVQQLFQSCGTVNRITI 122
                      +  ++  + A +EEVDSRS++VGNVDY+CTPEEVQQ FQSCGTVNR+TI
Sbjct: 113 SRNLLEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 172

Query: 123 RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNP 182
            TDKFGQPKG+AYVEFVE EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  P
Sbjct: 173 LTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFR-GRGRP 232

The following BLAST results are available for this feature:

BLAST of Chy7G136580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJN9	1.4e-74	78.77	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV...	[more]
Q9LX90	2.1e-73	77.09	Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV...	[more]
Q93VI4	6.3e-62	68.16	Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV...	[more]
O14327	1.8e-32	50.92	Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q9DDY9	4.1e-29	42.19	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]

BLAST of Chy7G136580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2R3	1.4e-93	98.89	Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0KXZ1	1.4e-93	98.89	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G110060 PE=4 SV...	[more]
A0A1S3CHX7	1.4e-93	98.89	polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CGQ3	2.1e-92	97.22	polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3CIE7	1.0e-91	96.22	polyadenylate-binding protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Chy7G136580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137160.1	3.06e-120	98.89	polyadenylate-binding protein 2 isoform X4 [Cucumis sativus]	[more]
XP_008462875.1	3.17e-120	98.89	PREDICTED: polyadenylate-binding protein 2-like isoform X2 [Cucumis melo] >KAA00...	[more]
XP_038877304.1	3.17e-120	98.89	polyadenylate-binding protein 2-like [Benincasa hispida]	[more]
XP_011653388.1	3.17e-120	98.89	polyadenylate-binding protein 2 isoform X3 [Cucumis sativus] >KGN53719.1 hypothe...	[more]
XP_022140995.1	1.06e-118	97.22	polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]	[more]

BLAST of Chy7G136580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65260.1	1.0e-75	78.77	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G10350.1	1.5e-74	77.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G10350.2	4.6e-68	77.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.1	4.5e-63	68.16	polyadenylate-binding protein 1	[more]
AT5G51120.2	8.2e-57	55.09	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 2..178
None	No IPR available	PANTHER	PTHR23236:SF79	SUBFAMILY NOT NAMED	coord: 2..178
None	No IPR available	CDD	cd12306	RRM_II_PABPs	coord: 55..126 e-value: 4.39463E-48 score: 148.979
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 55..126 e-value: 3.3E-23 score: 93.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 56..124 e-value: 5.1E-18 score: 64.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 54..130 score: 17.369957
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..127 e-value: 4.3E-29 score: 103.3
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 44..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G136580.1	Chy7G136580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding