Chy7G136530 (gene) Cucumber (hystrix) v1

Overview
NameChy7G136530
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
LocationchrH07: 10402563 .. 10403182 (-)
RNA-Seq ExpressionChy7G136530
SyntenyChy7G136530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCATGAGATCATTATGAAGGAGCACTTGGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCTTTGAAAGTTGATCCCGAAGATGAGGATGGCCTTGATGAAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGAAACACCTATCAACCCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGAATGCAAAAGATCGGGTCATATAAGAATGGATTGTCCTCTCCTCAAATCATCTAAGAAATCCAAGAAGAAGGCAATGAAGGCTACTTGGGATGATAGTAGCGAAAGTGAAAGTGAAGTTGAAGAAATGGCAAATCTTGGTCTCATGGCTCATAATGACAAAGAAGATGAACATGATGATAAGGTAACTCTAGAACCTCCTTCTATTGATGAATTATTTGAAAATTTTGAAAGCATGCAAAATGACCTAGAAAAACTTAGTTCTAAGTATGTTGTGCTTAAGAAGAAATACAATGTTTTAATTAGTGAAAATAAGTCTTTACTTGATACAATTGCTTGCTTTAAAGAGAATGAAAATGTTGAGCAAATTGA

mRNA sequence

ATGACTCATGAGATCATTATGAAGGAGCACTTGGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCTTTGAAAGTTGATCCCGAAGATGAGGATGGCCTTGATGAAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGAAACACCTATCAACCCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGCAAATTGA

Coding sequence (CDS)

ATGACTCATGAGATCATTATGAAGGAGCACTTGGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCTTTGAAAGTTGATCCCGAAGATGAGGATGGCCTTGATGAAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGAAACACCTATCAACCCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGCAAATTGA

Protein sequence

MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLSTQKESKGEKSKKDEQIX
Homology
[Close]
BLAST of Chy7G136530 vs. ExPASy TrEMBL
Match: A0A5A7TZF4 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00480 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.6e-30
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIM EHLEDESKKKKSIALKTISL+VDPEDED LD+DDI Y SRKYKNFIKRKKYF
Sbjct: 22  MTHEIIMTEHLEDESKKKKSIALKTISLEVDPEDEDDLDQDDITYLSRKYKNFIKRKKYF 81

Query: 61  KKHLSTQKESKGEKSKKDEQI 82
           KKHLSTQKESKGEKSKKDE I
Sbjct: 82  KKHLSTQKESKGEKSKKDEVI 102

[Close]
BLAST of Chy7G136530 vs. ExPASy TrEMBL
Match: A0A5D3E1G2 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00350 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIM EHLEDESKKKKSIALKTISL+VDPEDED LD+DDI Y SRKYKNFIK+KKYF
Sbjct: 22  MTHEIIMTEHLEDESKKKKSIALKTISLEVDPEDEDDLDQDDITYLSRKYKNFIKKKKYF 81

Query: 61  KKHLSTQKESKGEKSKKDEQI 82
           KKHLSTQKESKGEKSKKDE I
Sbjct: 82  KKHLSTQKESKGEKSKKDEVI 102

[Close]
BLAST of Chy7G136530 vs. ExPASy TrEMBL
Match: A0A5A7U923 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00640 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.8e-27
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIMK HLEDESKK KS+ALKTI L+VDP+DED LDE+DIAYFSRKYKNFIKRKKYF
Sbjct: 61  MTHEIIMKMHLEDESKKNKSVALKTIFLEVDPKDEDDLDENDIAYFSRKYKNFIKRKKYF 120

Query: 61  KKHLSTQKESKGEKSKKDEQ 81
           KKH+S+QKESK EKSKKDE+
Sbjct: 121 KKHMSSQKESKDEKSKKDEK 140

[Close]
BLAST of Chy7G136530 vs. ExPASy TrEMBL
Match: A0A5A7SRY3 (Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00110 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.8e-27
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
          MTHEIIMKEHL+DESKKKKSIAL TISL++  EDED LDEDDIAYFSRKY+NFIKRKKYF
Sbjct: 1  MTHEIIMKEHLKDESKKKKSIALNTISLEL--EDEDDLDEDDIAYFSRKYRNFIKRKKYF 60

Query: 61 KKHLSTQKESKGEKSKKDEQI 82
          KKHLSTQKESKGEK+KKDE I
Sbjct: 61 KKHLSTQKESKGEKNKKDEVI 79

[Close]
BLAST of Chy7G136530 vs. ExPASy TrEMBL
Match: A0A5A7TRZ7 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1333G00310 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIM+EHLEDESKKKKSIAL TISL++  EDED LDEDDI YFSRKYKNFIKRKK F
Sbjct: 39  MTHEIIMEEHLEDESKKKKSIALNTISLEL--EDEDDLDEDDIVYFSRKYKNFIKRKKCF 98

Query: 61  KKHLSTQKESKGEKSKKDEQI 82
           KK+LSTQK SKGEKSKKDE I
Sbjct: 99  KKYLSTQKVSKGEKSKKDEVI 117

[Close]
BLAST of Chy7G136530 vs. NCBI nr
Match: XP_031741720.1 (uncharacterized protein LOC116403915 [Cucumis sativus])

HSP 1 Score: 147 bits (370), Expect = 4.95e-39
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIMKEHLEDESKKKKSIALKTISL+VDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF
Sbjct: 211 MTHEIIMKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 270

Query: 61  KKHLSTQKESKGEKSKKDEQI 81
           KKHLSTQKESKGEKSKKDE I
Sbjct: 271 KKHLSTQKESKGEKSKKDEVI 291

[Close]
BLAST of Chy7G136530 vs. NCBI nr
Match: KAA0046765.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (344), Expect = 2.84e-38
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIM EHLEDESKKKKSIALKTISL+VDPEDED LD+DDI Y SRKYKNFIKRKKYF
Sbjct: 22  MTHEIIMTEHLEDESKKKKSIALKTISLEVDPEDEDDLDQDDITYLSRKYKNFIKRKKYF 81

Query: 61  KKHLSTQKESKGEKSKKDEQI 81
           KKHLSTQKESKGEKSKKDE I
Sbjct: 82  KKHLSTQKESKGEKSKKDEVI 102

[Close]
BLAST of Chy7G136530 vs. NCBI nr
Match: TYK29684.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (341), Expect = 3.62e-38
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIM EHLEDESKKKKSIALKTISL+VDPEDED LD+DDI Y SRKYKNFIK+KKYF
Sbjct: 22  MTHEIIMTEHLEDESKKKKSIALKTISLEVDPEDEDDLDQDDITYLSRKYKNFIKKKKYF 81

Query: 61  KKHLSTQKESKGEKSKKDEQI 81
           KKHLSTQKESKGEKSKKDE I
Sbjct: 82  KKHLSTQKESKGEKSKKDEVI 102

[Close]
BLAST of Chy7G136530 vs. NCBI nr
Match: KAA0033952.1 (zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 4.03e-35
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
          MTHEIIMKEHL+DESKKKKSIAL TISL++  EDED LDEDDIAYFSRKY+NFIKRKKYF
Sbjct: 1  MTHEIIMKEHLKDESKKKKSIALNTISLEL--EDEDDLDEDDIAYFSRKYRNFIKRKKYF 60

Query: 61 KKHLSTQKESKGEKSKKDEQI 81
          KKHLSTQKESKGEK+KKDE I
Sbjct: 61 KKHLSTQKESKGEKNKKDEVI 79

[Close]
BLAST of Chy7G136530 vs. NCBI nr
Match: KAA0051650.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa] >TYJ97960.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 7.46e-34
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 1   MTHEIIMKEHLEDESKKKKSIALKTISLKVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYF 60
           MTHEIIMK HLEDESKK KS+ALKTI L+VDP+DED LDE+DIAYFSRKYKNFIKRKKYF
Sbjct: 61  MTHEIIMKMHLEDESKKNKSVALKTIFLEVDPKDEDDLDENDIAYFSRKYKNFIKRKKYF 120

Query: 61  KKHLSTQKESKGEKSKKDE 79
           KKH+S+QKESK EKSKKDE
Sbjct: 121 KKHMSSQKESKDEKSKKDE 139

The following BLAST results are available for this feature:
BLAST of Chy7G136530 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G136530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZF48.6e-3091.36Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... [more]
A0A5D3E1G21.9e-2990.12Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... [more]
A0A5A7U9236.8e-2785.00Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... [more]
A0A5A7SRY36.8e-2787.65Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... [more]
A0A5A7TRZ71.4e-2485.19Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... [more]
BLAST of Chy7G136530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031741720.14.95e-3997.53uncharacterized protein LOC116403915 [Cucumis sativus][more]
KAA0046765.12.84e-3891.36zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v... [more]
TYK29684.13.62e-3890.12zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v... [more]
KAA0033952.14.03e-3587.65zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... [more]
KAA0051650.17.46e-3486.08zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v... [more]
BLAST of Chy7G136530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G136530.1Chy7G136530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding