Chy7G135160 (gene) Cucumber (hystrix) v1

Overview
NameChy7G135160
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 6660462 .. 6663029 (-)
RNA-Seq ExpressionChy7G135160
SyntenyChy7G135160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTATAGGTTAAATAGGGTCATAATAATACAGTGTACATGCAAGTGTAAAAATCTTAAAAGTAATGTTGTGGTTACTATTTGCCTCGGATTTTCAGATAAAAGTATTTTATGGAATTAAACTTATGTTTATGTTGTGTTTGTATTAATTTGATGCAATGTAGTTCGAGCTCTAAAACTTAATCTTTTAAGTTTTTCTCGATTGAATGCGTACGTTTGATGTATGGAAGGCAAGCAGAAACTTGGTCCAAATGCTTTCTAAAGTAAAATTCGTTGAACATCAAATGCTTAGGCTTTGTGGGCTTGAACTTACTTGGTCCATTTGACATTTTGGTCAAATTAAAATATTTTTGGGCTCAATTGGACTTTAACCCAAATAATAATATAGAGTTAGATCGAATTAATTTTATTCAAACGGTCTTAATGAAAACACATGTCAATAATTTTCAATGGGTGACAAATTCAATTATTTGTAATTTTTTCAATGATGTAACAATTTGTAATTGATCCGAAATTTCTCATTCAACCATTACTTTTAATTTTAAAATAAAATTAATATTTAAGTGTACCTTGAACAAATTTACTACTTAAATATTTGGTTTTTTAAGACAGCATGCTGCCATTTGATTTTTATATCATTTAAGTTGTTTCTCATTTATGAAGCAATATCATATGATATGAATACAATATAATACAATGATATAGGTTAATTTATAAAAAAAAACTAATATTACTTAAAAATAGCTTTTTTTTTCTTAGAAAAAACTAAAATATTGGTAAATTTAACATAAATACGCTAAATGTAATTCACTCTACCAAAAAAAGTTATAAAATGTCAAATTAATAACAATTATATGAAATACAATACAAACACAAAGTGCAATAAAAAAAACAATGTAAAAAATATTAAAATATAATAACGAATAGAATGTAATAGAAAAGAGACAAATAGTACCTCAACAAAAAAAAAAAAAAAATAGATAAGCCAAATCGAGAGTTAGATATGCAGTATATCTGGAAGCATCGGTATCTAATACATGTTTAATACAAATTCTGTCTCACATGAAGTTATGTGTTTCACAATTTGTCATTATAATTCGTTGCAGTAATTTTCTTTAATTTTAAATTTGTGTGTTGAAAAACAAAATTTCTATCGTAAGGTTATTTACTAATTTCAACGTGGTTTAGTGTATGGTAACATTTTCTTTACCCTACTTGAAATTTAATAATAATAATAAACACATTTACATTACTCTATTTATAAGTTGATTTATTTAAAAAAGAAAATAAATTAATCAAAATAAATAGTATAGAGCTATTAAACAAACGTTTTGAAAGAATTAAATTTGAAAACTAGAGAATTAAATCAGTATTTAAATCAATTTAAACAACAAAAACAAATGGAAGAAAAGAAAAGAAAAGAAAGCAATATGTACCATAATGATTATTTTGGCATTTCTTAAAAAATCTCATGCGCAGTAATTTCGAGTGTAATTTTCAAACTTTGCTATTTTTTCTTTCTTTTGGGGAAAAATTCGAAATTTAGCAAAATACTGTACTAATTTTTCTTATATATACGCTAAAAAATGTTTTTCATATTTAAATACCACACAGATATTAATATTTGTTTGGAAACAAAATAATATTGGACAAATGTTTTGAATCATAAATTAAAGTTAATTGTTGTTAAAGAAAAGGGTGATCATGGATTTTTAAAAGGAGAATTGTTATGTATAGGAAAAAAAAATGAAACCATTTAAAAATATATAGAAAAAAATTTAAACTAAAATGAGTTTTGCTTATACTTTTTTTTTGAAAATGTGGCATATTATAAATTGATTTAGAAAGATTTGGTTAAAGTAAATTAGAAGGTTAATTTTGAAAAAGAAAAAGAAAAGAAAAAAAAAAATGATGTGTTAATTGGGAATTAAGAAAAATGATGGAAATTGAGATTATATATAAATAAAAATGGGTAGGGAAGGTTTGAGTATCCATCCGGTTTTTAATATTTAATGGAAAAAGGATATTATTTTCTCGTGTGAAGAAGAGTGCCGTTCTTCGCATGTTACAAAATTTCCAGTATCAATCTTCTCTTCTTCATCTTCCAATTCCCTCTTCGTTCTCGTCGTCTCTCGCATGGCGGACCAATAATCACAAACTCAATTCCCATTCTCTATCAAACCATAATTCAATCCCCATTTTCCCCTAAACTTCTACCCACCCCCGATTTCTCATTCTTCTCCTACTCCCAACCTTATTCTTATTGCATTCTTCTCACCCGCATTGCTTTCATCACTTACCCATACTCCTTTTCTCTTCCCTTCCTTCCATTTTCAATTGCTACTCTCAAGGTCAGTATTCTTCCTTATTCCTTCCCTTCATATTGCTTATTTTTTAGGATTTACTTTCGTTTATTTCGTTTTTTAGATTTTTGTTTTTGATTATTACTTTTGGAATCCAAGTTTATGTTATGCACCATGCTCTAGGGTTTTATTATTTACACTTCTCTTACTTGTTGTTATTTTTTTCCTGATGTTTTACTCCACTTTAGGGGTCTTCTCATTGA

mRNA sequence

ATGATGTATAGAAGAGTGCCGTTCTTCGCATGTTACAAAATTTCCAGTATCAATCTTCTCTTCTTCATCTTCCAATTCCCTCTTCGTTCTCGTCGTCTCTCGCATGGCGGACCAATAATCACAAACTCAATTCCCATTCTCTATCAAACCATAATTCAATCCCCATTTTCCCCTAAACTTCTACCCACCCCCGATTTCTCATTCTTCTCCTACTCCCAACCTTATTCTTATTGCATTCTTCTCACCCGCATTGCTTTCATCACTTACCCATACTCCTTTTCTCTTCCCTTCCTTCCATTTTCAATTGCTACTCTCAAGGGGTCTTCTCATTGA

Coding sequence (CDS)

ATGATGTATAGAAGAGTGCCGTTCTTCGCATGTTACAAAATTTCCAGTATCAATCTTCTCTTCTTCATCTTCCAATTCCCTCTTCGTTCTCGTCGTCTCTCGCATGGCGGACCAATAATCACAAACTCAATTCCCATTCTCTATCAAACCATAATTCAATCCCCATTTTCCCCTAAACTTCTACCCACCCCCGATTTCTCATTCTTCTCCTACTCCCAACCTTATTCTTATTGCATTCTTCTCACCCGCATTGCTTTCATCACTTACCCATACTCCTTTTCTCTTCCCTTCCTTCCATTTTCAATTGCTACTCTCAAGGGGTCTTCTCATTGA

Protein sequence

MMYRRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPTPDFSFFSYSQPYSYCILLTRIAFITYPYSFSLPFLPFSIATLKGSSH*
Homology
[Close]
BLAST of Chy7G135160 vs. ExPASy TrEMBL
Match: A0A0A0KY92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377190 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 4   RRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPT 63
           RRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPT
Sbjct: 6   RRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPT 65

Query: 64  PDFSFFSYSQPYSYCILLTRIAFITYPYSFSLPFLPFSIATLKGSSH 111
           PDFSFFSYSQPYSYCILLTRIAFIT+P SFSLPFLPFSIATLKGSSH
Sbjct: 66  PDFSFFSYSQPYSYCILLTRIAFITHPDSFSLPFLPFSIATLKGSSH 112

[Close]
BLAST of Chy7G135160 vs. NCBI nr
Match: KGN54605.1 (hypothetical protein Csa_012238 [Cucumis sativus])

HSP 1 Score: 210 bits (534), Expect = 3.59e-68
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 4   RRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPT 63
           RRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPT
Sbjct: 6   RRVPFFACYKISSINLLFFIFQFPLRSRRLSHGGPIITNSIPILYQTIIQSPFSPKLLPT 65

Query: 64  PDFSFFSYSQPYSYCILLTRIAFITYPYSFSLPFLPFSIATLKGSSH 110
           PDFSFFSYSQPYSYCILLTRIAFIT+P SFSLPFLPFSIATLKGSSH
Sbjct: 66  PDFSFFSYSQPYSYCILLTRIAFITHPDSFSLPFLPFSIATLKGSSH 112

The following BLAST results are available for this feature:
BLAST of Chy7G135160 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G135160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY922.4e-5198.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377190 PE=4 SV=1[more]
BLAST of Chy7G135160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54605.13.59e-6898.13hypothetical protein Csa_012238 [Cucumis sativus][more]
BLAST of Chy7G135160 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G135160.1Chy7G135160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane