Chy7G134660 (gene) Cucumber (hystrix) v1

Overview
NameChy7G134660
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH07: 6012998 .. 6013908 (+)
RNA-Seq ExpressionChy7G134660
SyntenyChy7G134660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATACCATATGGTTTCCTGGTGGAAAGGGTCAGTGCAATTATTATTATCTTCGCTGTGGGATCTGAAATTAGATTTGTTTCTCTGTTCTCCAAAATTTAGAATTTTGGAGCTTGAATAAACCACCTTTCCTTTGGATAGGCGCTATTGTTTCTTTCCGTTGTTGTGGTGTAGTTAATAAGCTTGTTTGATAACTATTTAGTTTTAGTTATGGTCTTTTTGTTGTCCAACAATATATTTATTAGAGTTTTTATCTTTCTTGAGGTGGATCAGAATCTATAGTTGAATACAAGAAGCAAATTTACTGTTTGTTTCTTGAATTTAGCTTGAAATTTGATAACGCTTGTAAAAAGTATACAACAAAGCAAAATGGTTATCAAATAACTTTTGTAATTTGACTTCTCAAACTAAGCTCTACCTTTTGGGTTTATTATCTTCGTTGTAAAAAAATATTCTTGCTTCTGATAAGTCGTTTCTTCTCCAGACCTCGAAGATGAGCAATGGGTCAGAGACACATACCTTAGTGAGTCAATCCTCTCTCTCAGCGCCTTTAATGCTGGTTTTAGTTTCCTGTATTTGAAATTTATGATTTGTTTTCACAATTTTCTTATCATGGTCTTCTTCTTTCCTAAGGATATATTTGAACTTTTAGTCAAATTATATATAAAATGAAATTGGATAAGAAACAATTTCGTTGATGTACGAATATGAATATGTTTGTATCTAATAACTATTTCTCATTTTCAGGTTTATGGGAGTCGAGCAAACCACACAAATCAAATACGATCATTTTCTCTCTTGAGGTGCTGGTTTTCTACCCTAAAAACATTTTTTTTTTGGGTTATCAAATGGTAGTGTTCTCTCCTTGTAGAAATTAACAATTTGGATTTTCCAAAAGGGAAAAAGTAA

mRNA sequence

ATGCTATACCATATGGTTTCCTGGTGGAAAGGCTTGAAATTTGATAACGCTTGTAAAAAGTATACAACAAAGCAAAATGACCTCGAAGATGAGCAATGGGTCAGAGACACATACCTTAGTTTATGGGAGTCGAGCAAACCACACAAATCAAATACGATCATTTTCTCTCTTGAGGTGCTGGTTTTCTACCCTAAAAACATTTTTTTTTTGGGTTATCAAATGGTAGTGTTCTCTCCTTGTAGAAATTAACAATTTGGATTTTCCAAAAGGGAAAAAGTAA

Coding sequence (CDS)

ATGCTATACCATATGGTTTCCTGGTGGAAAGGCTTGAAATTTGATAACGCTTGTAAAAAGTATACAACAAAGCAAAATGACCTCGAAGATGAGCAATGGGTCAGAGACACATACCTTAGTTTATGGGAGTCGAGCAAACCACACAAATCAAATACGATCATTTTCTCTCTTGAGGTGCTGGTTTTCTACCCTAAAAACATTTTTTTTTTGGGTTATCAAATGGTAGTGTTCTCTCCTTGTAGAAATTAACAATTTGGATTTTCCAAAAGGGAAAAAGTAA

Protein sequence

MLYHMVSWWKGLKFDNACKKYTTKQNDLEDEQWVRDTYLSLWESSKPHKSNTIIFSLEVLVFYPKNIFFLGYQMVVFSPCRN*QFGFSKREKVX
Homology
[Close]
BLAST of Chy7G134660 vs. ExPASy TrEMBL
Match: A0A0A0L1V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G363440 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.2e-32
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 1  MLYHMVSWWKGLKFDNACKKYTTKQNDLEDEQWVRDTYLSLWESSKPHKSNTIIFSLEVL 60
          MLY MVSWWKGLKF+NACKKYTTKQNDLEDEQ VRDTYLSLWESSKPHKS +IIFSLEVL
Sbjct: 1  MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL 60

Query: 61 VFYPKNIFFLGYQMV 76
          VFYPK++FFLGYQMV
Sbjct: 61 VFYPKHLFFLGYQMV 75

[Close]
BLAST of Chy7G134660 vs. NCBI nr
Match: KGN54562.1 (hypothetical protein Csa_012174 [Cucumis sativus])

HSP 1 Score: 146 bits (369), Expect = 1.45e-43
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 1  MLYHMVSWWKGLKFDNACKKYTTKQNDLEDEQWVRDTYLSLWESSKPHKSNTIIFSLEVL 60
          MLY MVSWWKGLKF+NACKKYTTKQNDLEDEQ VRDTYLSLWESSKPHKS +IIFSLEVL
Sbjct: 1  MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL 60

Query: 61 VFYPKNIFFLGYQMV 75
          VFYPK++FFLGYQMV
Sbjct: 61 VFYPKHLFFLGYQMV 75

The following BLAST results are available for this feature:
BLAST of Chy7G134660 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G134660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1V96.2e-3290.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G363440 PE=4 SV=1[more]
BLAST of Chy7G134660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54562.11.45e-4390.67hypothetical protein Csa_012174 [Cucumis sativus][more]
BLAST of Chy7G134660 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G134660.1Chy7G134660.1mRNA