Chy7G133800 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G133800
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	40S ribosomal protein S15a
Location	chrH07: 4675424 .. 4680177 (+)
RNA-Seq Expression	Chy7G133800
Synteny	Chy7G133800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTTTTGGGTGGTTAGAGAAGCAACAATCACATTGATTCAACTTTGAAAATGAAAGTCGTAGATGGTAAAAACAGTAAAACGGACGACAATTCAATTTTGAGATAATATTAAACATTCTTGTGTGAATTATACAATAGGTGTAATTAGATCAAGTCCAAACACCTTTAAAAACATTGATTGAGATGGTCTAATTGCAAGAAAAGAAGATAAATGAAAAGAAAGAAAATCAAAATTTTCATACAAATCTCAAAATTTTAAGAAATGGGGGAAAATCAAATTTTCCCCTTTATTGAAGTATGGAGCCTATGGATTTCGACCTAAATTTTACACCTTAGGGGAAAGTTGGTAGAAATACCCAACCAAACTTCACAAAAGCATTGTAAAAGTCAATGGACCAAATATTAAATTCATGGCCCTTACCAACTCAACCCTGAAGGGATAAGAGTCATTGCACAATATATCATAAGAATACATAGACCTAACTTAATTTTAATTTGGATTTGGAAATACCCATACACGAAAAATATACAGAGAACCTATCGTATCAAATATTAAACATACTTTTCACTCAAAAAAAAATTACATGTAAAATAAAGGCTTACTCATGTTGATGTTTCTGTATCTACTAAACACCAAATTGTTGTTGGAACACTCTCACTGGCTACATTTCTATCCTTTGAGTGATATAGAATTTATGTCTCGTGGGAACCAAGAATTTGGAATTGGGGAAAATTTCAAGAGAAAAAAATTGAGAGATTTCTTTTTTCTTTGCAAAATTTTATCAATTAGGTTAAATTGTTCTACGACTTTTACCGATTGAATAAGTGGAAGATAGAGAGAAAACGATATGGGATCATCCAACGTTCCCCTAAATAACTAGCACGTAATAGAGTTATTTTATTACTTTAATTTAAATGAATTAAATTAATATGAAATAATTACGTAAATTAATTTAATAATTAATTAAACATAATTAATCAATATTTTATTTAAACCATATTTAAATGAGTAGCTTTCACGTTACCTATAATTTTAAAATCAATTTGAATTAAACTAAAATATTAATTAATTATCTAATTAATTGCTAAATTAAATATCCTATATTTAATTTAATCCATACTTGAATCATATTCACATACAATATCTTATTATTCTATAAATTAGTTTAAAACCAAATCCAAAATAACATTTATATTATAAAGTCAAATTCAATATAATATTATAAACTTTATATTATAATGCATCATCAAACATTGTATTATTTTTCTAATTGAATTTGAACGATTCAAATTTCGTCCAATCTATAATAACCTCTATAATTTAGAAAAGAATCTAACGAATCTACAAATAAGAAGCTATAACGATATGAGATTAATTGGCTAAACTCATTAACACATTAATCAATGTTCGTTAACTGCGTGTATAATCCACTAAATACTCACAGCTGGACTTCTATCACTACAGATATACTCATGTGTCCAAATAACAACAAGTTAGTCCTTTACAACTGTCTGTAACATCAAGTGAGTCAAATTACTGTTTTACCTTTGGATTACTTATTAGTCCTTAAATATCAGTACTCTTTTAATGAACAATTGTGACTCAACCAATAAACAGAACCCTCTCGTGCTATAAAAAGGATTTGGTTCTTCGTTAAAGTTCTATACACCAATTAAGGGAGCACTTGTATACTCTCTTAAATTTGGGAAGGAGAGAATTCCATGTTGTAAAATTATGTTCCTAACTCCATACTTAACCTTGTCTCCAAAATGGTTGGTTTATCGAGTCGACAATATGGCCACTCTTCTAATGAACAATCGTGACTCAACCAATAAACAAAACCCTTTCGTGCTATAAAAAGGATTTGGCTCTTCGTTAAAGTTCTATACACCAATTAAGGGAGCACTCATATACTCTCATAAAGTCAGGAAAGAGATAATTTCATGTTGTAAAATTATGTTCCCAACTCCATACTTAACCTTGTCTCCAAAACGGTAGGTTCATCGAGTCGACAATATGGTCACTCTTCTAATGAACAATTGTGACTCAACCAATAAACAAAACCCTCTCGTGCTATAAAAAGGATTTGGCCCTTCGTTAAAGTTCTATACATCAATTAAGGGAACACTCATATATACTCTCCTAAAGTTGAAAAGGAGAGAATTCCATGTTGTAAAATTATGTTCAGAACTCCATACTTAACCTTGTCTCCAAAATGGTAAGTTTATCGAGTTGGCAATTATATGGTCACTCTCACTTGTCAAATCAAAGGATAACCTCTCACACAAACAAGAGTTCATATTACACTTGAAAATAAAAATAAGTTGCTTAAATCATTATATTGAAATAGAAACATAACTAGCCAATAAACCTACATCTAGTAGTTACTATTTTGTGGTTTAGTCTTATGCAAACTCATTACATATAATATCTTCACTCACATGTCATGTGAACATGTTGGATTATTGCATCTCTATTAAATACAAAGTAGGTCATATTGACATTATTATCAGGTTAAGGTACTATAGCTTATACTATAAATTATTTAAGTTGTATACCTTGAACATTGATCCATGTATATATCCACAAACACTTCAAGATTCACAAGGTAGCTTGGGATGGTAGTTTACTATATTTAAGTAATGAAGACAAAACTAATAAAATAATCAACAACACTTATTTAAATTGCAATAATAATACTTTATTAACACAACTCTAAATGAACTGTATTTACCATCCACCTGTGTTAGGATATAAAACTCAACAACCTAACTTGTGTTGGAGAGCCAAACACCCTTAAAATCATAATATTTATTCAATGACAAACTACAGGTCTATGTTTGATATTTGTTTTCAAAAAGCAATGAGCATAAGAGTGAGAGAGCGAAGTGGGTTGCACGTCAGCCCAAGAAAGCGAAGGCTGAAGAATTCTAACTCGTGAGTAGTATTGATGTCAAAAAATGGACCAACGGAAAATTGTATTATGGAAAAAAAAAGTCCAAGTACCTTACAAGACAAAAGAGATTGAACACCGTTACACTGTCAAAACACACACTCTTACACTCGAGTCAATCTCAAGTTTACAACTAACTTGACAATAAAATATAAGAGAGTAGTTTAGGTGCATCCTCAACTAATAACTTTTGTCGTTTGTATAAGTTAATAATATATAATTGAAGCTTTGACTCATTACAACTTCGATTGCTTATATTACTTATTGGGAGATTATGGTACTCCGTCGATCTTGTCACAAATGCTAATAAGAACTAAAGTTACCCCAAAGTGTTTTTTTTTCTTTCAAAAGGTTAATTAAATACAGGGTAGAAAGATTTGAACGGAGACCTTATGTCCACGGGTATGTATGGTTGCGTTAGGCTCATGTTGGCAATTACTCCAAAGTTACCCAATGCATAATCATATTCTTTTAAGAAAATCAATAAAATTAAAAGTTCGTTTAGATTAATTTAAGAAAAAAATGTTTTTCGAAAAACTTATTTTGTTTAAACTATTTTTTCTAAAAATAATTTAAAATACACTTAAAAATCTATTTTGATTAGCTTTCAAAACACTTTTAACTTTGTTTTCAAAATTACTCATTTTCTAAATTAAATTCTTAGAGAGACCATAGAGACACCATAAATGAAATGAAATGAATAGGAGAAAACAAATACTAAAAAGCAATTTAAATTTGTGGGTTAAAAGAAATCCCAAAATCCCCAATTTGGGCCTAAATCCGAAGCCCTATAGTTTAGAACCGAGCCCTGTTTTAAACGGCACTATAAATAAATTAGGTTTCCTCTTCTTTCTTCTCTCTTTTCACTCAGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAACTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGGTTTGTTTTGAATTTCTTTCTTTTTAATCTTTATTTACTTCTTCTAGTCGATGATTTAAGCGTACAACTCAAATTTATACACTGCTCATAGATAAATTGGATTTTTTTTTTTCTAGAAAGGATTGATTGTATGATCTGTTAATTAATCTCATAGGCTGTTTTTGTTATTTAATGATTCATATTAGAAGTAGGGTTTTATCATTTGAAAAGATATACACATTTTTAGCTGTTTGTTTAATTTTGCGGCATTCTTAACTTGAACTTTGGGGATTTATGTATTTGCAGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGTATACGTTGTTTAGCAATTTCATTTCCATCTCCTTCGTTGCAACACCTTAAACCTGTTTAATTTTGGTTCTGTTAAATATTTCATTGTTTTAGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTAATTGTATTATGCTTAAGACTTGTTTGATTTTACTCGAATCCGAACTTTTTGTAACAAATGACATCCGCATGATTGCAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAA

mRNA sequence

ATGAAATTTTTGGGTGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAACTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTAATTGTATTATGCTTAAGACTTGTTTGATTTTACTCGAATCCGAACTTTTTGTAACAAATGACATCCGCATGATTGCAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAA

Coding sequence (CDS)

ATGAAATTTTTGGGTGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAACTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTAATTGTATTATGCTTAAGACTTGTTTGATTTTACTCGAATCCGAACTTTTTGTAACAAATGACATCCGCATGATTGCAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAA

Protein sequence

MKFLGAVEEAEALIPIRTLQLSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESELFVTNDIRMIAVWIHRLDYICGNHGSRRGQKKERWW*

Homology

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BLAST of Chy7G133800 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 3.7e-49
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 4.8e-49
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGF----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48
Identity = 98/118 (83.05%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 191.4 bits (485), Expect = 9.0e-48
Identity = 97/118 (82.20%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-44
Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. ExPASy TrEMBL
Match: A0A0A0KZP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.9e-61
Identity = 130/150 (86.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MKFLGAVEEAEALIPIRTLQLSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIR 60
           + F  AVEEAEALIPIRTLQ SSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIR
Sbjct: 53  LSFHSAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIR 112

Query: 61  PSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEG 120
           PSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEG
Sbjct: 113 PSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEG 172

Query: 121 WTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           WTARLLPSRQ  F    I+L T   +++ E
Sbjct: 173 WTARLLPSRQFGF----IVLTTSAGIMDHE 198

[Close]

BLAST of Chy7G133800 vs. ExPASy TrEMBL
Match: A0A0D2PPS7 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G108200 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-48
Identity = 104/146 (71.23%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHR+GK
Sbjct: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESELF 152
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV                     
Sbjct: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV--------------------- 160

Query: 153 VTNDIRMIAVWIHRLDYICGNHGSRR 179
                    +W++   +IC +HG RR
Sbjct: 165 ---------IWVYCAYHICWHHGPRR 160

[Close]

BLAST of Chy7G133800 vs. ExPASy TrEMBL
Match: A0A7J0GVR0 (Ribosomal protein S8 family protein OS=Actinidia rufa OX=165716 GN=Acr_24g0010730 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.2e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 132
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of Chy7G133800 vs. ExPASy TrEMBL
Match: A0A0D2RM61 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G136100 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.2e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 132
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of Chy7G133800 vs. ExPASy TrEMBL
Match: A0A0D2TC73 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G230200 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.2e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 132
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of Chy7G133800 vs. NCBI nr
Match: XP_013713851.1 (40S ribosomal protein S15a-like [Brassica napus] >KAF3568415.1 hypothetical protein DY000_02018026 [Brassica cretica])

HSP 1 Score: 202 bits (513), Expect = 1.34e-63
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFF 134
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVC +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCLY 102

[Close]

BLAST of Chy7G133800 vs. NCBI nr
Match: KJB08854.1 (hypothetical protein B456_001G108200 [Gossypium raimondii])

HSP 1 Score: 202 bits (514), Expect = 3.96e-63
Identity = 104/146 (71.23%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHR+GK
Sbjct: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESELF 152
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV                     
Sbjct: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV--------------------- 160

Query: 153 VTNDIRMIAVWIHRLDYICGNHGSRR 178
                    +W++   +IC +HG RR
Sbjct: 165 ---------IWVYCAYHICWHHGPRR 160

[Close]

BLAST of Chy7G133800 vs. NCBI nr
Match: XP_025826619.1 (40S ribosomal protein S15a-1-like isoform X2 [Panicum hallii])

HSP 1 Score: 200 bits (509), Expect = 4.21e-63
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQ+HGYIGEFE+VDDHR+GK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQRHGYIGEFEYVDDHRAGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFF 134
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV FF
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVPFF 102

[Close]

BLAST of Chy7G133800 vs. NCBI nr
Match: GFZ14883.1 (ribosomal protein S8 family protein [Actinidia rufa])

HSP 1 Score: 200 bits (508), Expect = 4.63e-63
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 131
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of Chy7G133800 vs. NCBI nr
Match: KJB20165.1 (hypothetical protein B456_003G136100 [Gossypium raimondii])

HSP 1 Score: 200 bits (508), Expect = 5.09e-63
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 131
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of Chy7G133800 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-50
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-50
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. TAIR 10
Match: AT5G59850.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-50
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  +    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGY----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. TAIR 10
Match: AT3G46040.1 (ribosomal protein S15A D )

HSP 1 Score: 195.7 bits (496), Expect = 3.4e-50
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 33  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 92
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 93  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLESE 151
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F    I+L T   +++ E
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGF----IVLTTSAGIMDHE 114

[Close]

BLAST of Chy7G133800 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 92/122 (75.41%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 29  LSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDH 88
           +  IMVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDH
Sbjct: 3   VEAIMVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDH 62

Query: 89  RSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLNCIMLKTCLILLE 148
           RSGKIVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ  +    I+L T   +++
Sbjct: 63  RSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGY----IVLTTSAGIMD 120

Query: 149 SE 151
            E
Sbjct: 123 HE 120

The following BLAST results are available for this feature:

BLAST of Chy7G133800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42798	3.7e-49	83.90	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
Q9LX88	4.8e-49	83.90	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=...	[more]
Q00332	1.1e-48	83.05	40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3	[more]
Q9AT34	9.0e-48	82.20	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
O80646	3.5e-44	77.12	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of Chy7G133800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZP3	1.9e-61	86.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1	[more]
A0A0D2PPS7	1.1e-48	71.23	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G108200 PE=3 ...	[more]
A0A7J0GVR0	7.2e-48	98.99	Ribosomal protein S8 family protein OS=Actinidia rufa OX=165716 GN=Acr_24g001073...	[more]
A0A0D2RM61	7.2e-48	98.99	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G136100 PE=3 ...	[more]
A0A0D2TC73	7.2e-48	98.99	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G230200 PE=3 ...	[more]

BLAST of Chy7G133800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_013713851.1	1.34e-63	94.12	40S ribosomal protein S15a-like [Brassica napus] >KAF3568415.1 hypothetical prot...	[more]
KJB08854.1	3.96e-63	71.23	hypothetical protein B456_001G108200 [Gossypium raimondii]	[more]
XP_025826619.1	4.21e-63	95.10	40S ribosomal protein S15a-1-like isoform X2 [Panicum hallii]	[more]
GFZ14883.1	4.63e-63	98.99	ribosomal protein S8 family protein [Actinidia rufa]	[more]
KJB20165.1	5.09e-63	98.99	hypothetical protein B456_003G136100 [Gossypium raimondii]	[more]

BLAST of Chy7G133800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07770.1	2.6e-50	83.90	ribosomal protein S15A	[more]
AT1G07770.2	2.6e-50	83.90	ribosomal protein S15A	[more]
AT5G59850.1	2.6e-50	83.90	Ribosomal protein S8 family protein	[more]
AT3G46040.1	3.4e-50	83.90	ribosomal protein S15A D	[more]
AT2G39590.1	1.1e-45	75.41	Ribosomal protein S8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1490.10		coord: 102..137 e-value: 6.8E-12 score: 46.8
None	No IPR available	GENE3D	3.30.1370.30		coord: 33..101 e-value: 2.0E-35 score: 122.5
None	No IPR available	PANTHER	PTHR11758:SF35	40S RIBOSOMAL PROTEIN S15A-1-RELATED	coord: 33..135
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 39..118 e-value: 1.3E-10 score: 41.3
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 33..135
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 36..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G133800.1	Chy7G133800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome