Chy7G132630 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G132630
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	splicing factor U2af small subunit B-like
Location	chrH07: 3327414 .. 3328244 (-)
RNA-Seq Expression	Chy7G132630
Synteny	Chy7G132630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAACACTTGGCCTCAATATTTGGCACCGAGAAGGACCGTGTCAACTGCCCTTTCTATTTCAAGATCGGCGCCTGCCGCCATGGAGATCGCTGCTCTCGCCTCCACAACCGCCCTACTATTTCCCCTACTCTTCTCCTATCCAACATGTACCAGCGCCCCGACATGATCACCCCGGGCGTTGATGCTCAGGGCCAGCCCATAGATCCCCGAAAGATTCAGGAACACTTCGAAGATTTCTACGAAGACATTTATGAGGAACTTGGCAAGTTCGGTGAGATCGAGAGCCTTAATGTCTGTGATAATCTCGCCGACCACATGATTGGAAATGTCTACGTTCAGTTTAGGGAGGAGGACCAGGCTGCCGCCGCACTCCAAGCCTTGCAAGGGCGGTTTTACTCAGGTCGACCCATTATCGCAGATTTTTCTCCCGTAACTGATTTCCGCGAAGCCACGTGCCGCCAGTACGAGGAGAATAATTGCAACCGAGGGGGATATTGCAATTTTATGCACGTAAAGATGATTGGGAAGGATTTGAGAAGGAAGCTGTTCGGTAGGTACCGGGGATATAGGCCGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGGAACCGGAAAGAGCACGATAGGCGTGAAAGGGATTACAGAGACCGTGACTATCGCGGAAACGGACGGAGCAAGGAGCGTCATGATAGGGATGGGGGAAGGAGAAGACAAGGCAGCCCCAGACGAAGCCGAAGCCGAAGCCCTGTCATTGTGAGAGAAGGTAGCGAAGAGCGACGTGCCCGTATTGAACAGTGGAACCGAGAAAGGGAGGAGAAGCATTGA

mRNA sequence

ATGGCTGAACACTTGGCCTCAATATTTGGCACCGAGAAGGACCGTGTCAACTGCCCTTTCTATTTCAAGATCGGCGCCTGCCGCCATGGAGATCGCTGCTCTCGCCTCCACAACCGCCCTACTATTTCCCCTACTCTTCTCCTATCCAACATGTACCAGCGCCCCGACATGATCACCCCGGGCGTTGATGCTCAGGGCCAGCCCATAGATCCCCGAAAGATTCAGGAACACTTCGAAGATTTCTACGAAGACATTTATGAGGAACTTGGCAAGTTCGGTGAGATCGAGAGCCTTAATGTCTGTGATAATCTCGCCGACCACATGATTGGAAATGTCTACGTTCAGTTTAGGGAGGAGGACCAGGCTGCCGCCGCACTCCAAGCCTTGCAAGGGCGGTTTTACTCAGGTCGACCCATTATCGCAGATTTTTCTCCCGTAACTGATTTCCGCGAAGCCACGTGCCGCCAGTACGAGGAGAATAATTGCAACCGAGGGGGATATTGCAATTTTATGCACGTAAAGATGATTGGGAAGGATTTGAGAAGGAAGCTGTTCGGTAGGTACCGGGGATATAGGCCGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGGAACCGGAAAGAGCACGATAGGCGTGAAAGGGATTACAGAGACCGTGACTATCGCGGAAACGGACGGAGCAAGGAGCGTCATGATAGGGATGGGGGAAGGAGAAGACAAGGCAGCCCCAGACGAAGCCGAAGCCGAAGCCCTGTCATTGTGAGAGAAGGTAGCGAAGAGCGACGTGCCCGTATTGAACAGTGGAACCGAGAAAGGGAGGAGAAGCATTGA

Coding sequence (CDS)

ATGGCTGAACACTTGGCCTCAATATTTGGCACCGAGAAGGACCGTGTCAACTGCCCTTTCTATTTCAAGATCGGCGCCTGCCGCCATGGAGATCGCTGCTCTCGCCTCCACAACCGCCCTACTATTTCCCCTACTCTTCTCCTATCCAACATGTACCAGCGCCCCGACATGATCACCCCGGGCGTTGATGCTCAGGGCCAGCCCATAGATCCCCGAAAGATTCAGGAACACTTCGAAGATTTCTACGAAGACATTTATGAGGAACTTGGCAAGTTCGGTGAGATCGAGAGCCTTAATGTCTGTGATAATCTCGCCGACCACATGATTGGAAATGTCTACGTTCAGTTTAGGGAGGAGGACCAGGCTGCCGCCGCACTCCAAGCCTTGCAAGGGCGGTTTTACTCAGGTCGACCCATTATCGCAGATTTTTCTCCCGTAACTGATTTCCGCGAAGCCACGTGCCGCCAGTACGAGGAGAATAATTGCAACCGAGGGGGATATTGCAATTTTATGCACGTAAAGATGATTGGGAAGGATTTGAGAAGGAAGCTGTTCGGTAGGTACCGGGGATATAGGCCGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGGAACCGGAAAGAGCACGATAGGCGTGAAAGGGATTACAGAGACCGTGACTATCGCGGAAACGGACGGAGCAAGGAGCGTCATGATAGGGATGGGGGAAGGAGAAGACAAGGCAGCCCCAGACGAAGCCGAAGCCGAAGCCCTGTCATTGTGAGAGAAGGTAGCGAAGAGCGACGTGCCCGTATTGAACAGTGGAACCGAGAAAGGGAGGAGAAGCATTGA

Protein sequence

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEKH*

Homology

[Close]

BLAST of Chy7G132630 vs. ExPASy Swiss-Prot
Match: Q9FMY5 (Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B PE=1 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 8.5e-127
Identity = 238/283 (84.10%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNVCDNLADHMIGNVYV F+EED
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
            AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++L
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RRKLFGRYRG--YRPSRSRSRSLSPRNRKEHDR-RER-DYRDRDYRGNGR----SKERHD 240
           RRKLFGRYR    R SRSRSRS+SPR ++EH R RER D RDRD  GNG+      ERHD
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 RD-GGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREE 275
           RD GGRRR GSP+  RSRSP  VREGSEERRARIEQWNRER+E
Sbjct: 241 RDGGGRRRHGSPK--RSRSPRNVREGSEERRARIEQWNRERDE 281

[Close]

BLAST of Chy7G132630 vs. ExPASy Swiss-Prot
Match: Q9S709 (Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A PE=1 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.4e-124
Identity = 238/293 (81.23%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+CDNLADHMIGNVYVQF+EED
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVK++ ++L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 181 RRKLFGRY-RGYR---PSRSRSRSLSPRNRKEHDR-----RERDYRDRD---YR-GNGR- 240
           RRKLFGRY R YR    SRSRSRS+SPRN++++DR     RE  +RDRD   YR G+G+ 
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240

Query: 241 ---SKERHDRDGGR-RRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
                ER +RDG R RRQ SP+  R  SP   REGSEERRARIEQWNREREEK
Sbjct: 241 SSERSERQERDGSRGRRQASPK--RGGSPGGGREGSEERRARIEQWNREREEK 291

[Close]

BLAST of Chy7G132630 vs. ExPASy Swiss-Prot
Match: Q6AUG0 (Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35B PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.6e-112
Identity = 223/308 (72.40%), Postives = 244/308 (79.22%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDP K+QEHFEDFYEDIYEEL KFGE+E+LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61  GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QA AA  ALQGRFYSGRPII ++SPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IG++L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNR-----KEHDRRERD-------------------- 240
           RRKL+G     R S  RSRS SPR+R     ++  RRERD                    
Sbjct: 181 RRKLYGGRS--RRSHGRSRSPSPRHRRGNRDRDDFRRERDGYRGGGDGYRGGGGGGGGDG 240

Query: 241 YRDRD-YRGNG-----RSKERHDR--DGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQ 276
           YR  D YRG G         R+DR  DGGRRR GSP R R+RSP  VRE SEERRA+IEQ
Sbjct: 241 YRGGDSYRGGGGGGRRGGGSRYDRYDDGGRRRHGSPPR-RARSP--VRESSEERRAKIEQ 300

[Close]

BLAST of Chy7G132630 vs. ExPASy Swiss-Prot
Match: Q9ZQW8 (Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35A PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 6.1e-109
Identity = 213/292 (72.95%), Postives = 235/292 (80.48%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLLSNMY RPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           G+DAQG PIDP KIQ  FEDFYEDI+EEL K+GEIESL+VCDN ADHMIGNVYVQFREED
Sbjct: 61  GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAA ALQAL GR+YSGRPII +FSPV+DFREATCRQYEEN+CNRGGYCNFMHVK IG+DL
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSP---RNRKEHDR----RERDYRD------RDY--RGNG 240
           R++LFG     R S S  RS SP     R+++DR    R RD+ D       DY   G+ 
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR 240

Query: 241 RSKERH----DRDGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNRERE 274
           RS ERH    D DG RRR     RSR+RSP  VR+GSEERRA+IEQWNRERE
Sbjct: 241 RSSERHRSSYDSDGSRRR----HRSRTRSP--VRDGSEERRAQIEQWNRERE 286

[Close]

BLAST of Chy7G132630 vs. ExPASy Swiss-Prot
Match: A1A4K8 (Splicing factor U2AF 35 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.7e-66
Identity = 132/250 (52.80%), Postives = 171/250 (68.40%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P   + 
Sbjct: 1   MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEEL-GKFGEIESLNVCDNLADHMIGNVYVQFREE 120
             D     +   ++QEH+++F+E+++ E+  K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61  SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120

Query: 121 DQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKD 180
           + A  A+  L  R+++G+PI A+ SPVTDFREA CRQYE   C RGG+CNFMH+K I ++
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180

Query: 181 LRRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRR 240
           LRR+L+GR R    SRSRSR          +RR R  RDR   G G         GG  R
Sbjct: 181 LRRELYGRRRKKHRSRSRSR----------ERRSRS-RDRGRGGGG--------GGGGGR 231

Query: 241 QGSPRRSRSR 250
           +   RRSR R
Sbjct: 241 ERDRRRSRDR 231

[Close]

BLAST of Chy7G132630 vs. ExPASy TrEMBL
Match: A0A0A0L4P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664540 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.5e-153
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
           RRKLFGRYRGYR SRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ
Sbjct: 181 RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240

Query: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
           GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. ExPASy TrEMBL
Match: A0A5A7VFL1 (Splicing factor U2af small subunit B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00280 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.3e-151
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
           RRKLFGRYRGYRPSRSRSRSLSPRNRKE+DRRERDYR+R+YRGNGRSKERHDRDGGRRR 
Sbjct: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEYDRRERDYREREYRGNGRSKERHDRDGGRRRH 240

Query: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
           GSPRRSRSRSPVI REGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSRSPVIAREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. ExPASy TrEMBL
Match: A0A1S3BUN6 (splicing factor U2af small subunit B-like OS=Cucumis melo OX=3656 GN=LOC103493856 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.3e-151
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
           RRKLFGRYRGYRPSRSRSRSLSPRNRKE+DRRERDYR+R+YRGNGRSKERHDRDGGRRR 
Sbjct: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEYDRRERDYREREYRGNGRSKERHDRDGGRRRH 240

Query: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
           GSPRRSRSRSPVI REGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSRSPVIAREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. ExPASy TrEMBL
Match: A0A6J1CN17 (splicing factor U2af small subunit B-like OS=Momordica charantia OX=3673 GN=LOC111012985 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.3e-143
Identity = 263/278 (94.60%), Postives = 268/278 (96.40%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKE---RHDRDGGR 240
           RRKLFGRYRGYR SRSRSRSLSPRNRK++DRRERD+RDRD+RGNGRSKE   R+DRDGGR
Sbjct: 181 RRKLFGRYRGYRRSRSRSRSLSPRNRKDYDRRERDFRDRDFRGNGRSKERYDRYDRDGGR 240

Query: 241 RRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
           RR GSPRRSRS     VREGSEERRARIEQWNREREEK
Sbjct: 241 RRHGSPRRSRSP----VREGSEERRARIEQWNREREEK 274

[Close]

BLAST of Chy7G132630 vs. ExPASy TrEMBL
Match: A0A6J1IV82 (splicing factor U2af small subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111480904 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142
Identity = 262/279 (93.91%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+CDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNICDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFG-RYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKE---RHDRDGG 240
           RRKLFG R+RGYR SRSRSRSLSPRNRK++DRRERDYRDRD+RGNGRSKE   R+DRDGG
Sbjct: 181 RRKLFGSRFRGYRRSRSRSRSLSPRNRKDYDRRERDYRDRDHRGNGRSKERPDRYDRDGG 240

Query: 241 RRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
           RRR GSPRRSRS     VREGSEERRARIEQWNREREEK
Sbjct: 241 RRRHGSPRRSRSP----VREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. NCBI nr
Match: XP_004145565.1 (splicing factor U2af small subunit B [Cucumis sativus] >KGN55547.1 hypothetical protein Csa_012279 [Cucumis sativus])

HSP 1 Score: 543 bits (1398), Expect = 1.82e-194
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
           RRKLFGRYRGYR SRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ
Sbjct: 181 RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240

Query: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275
           GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. NCBI nr
Match: XP_008453027.1 (PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >KAA0064675.1 splicing factor U2af small subunit B-like [Cucumis melo var. makuwa] >TYK19916.1 splicing factor U2af small subunit B-like [Cucumis melo var. makuwa])

HSP 1 Score: 537 bits (1383), Expect = 3.52e-192
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
           RRKLFGRYRGYRPSRSRSRSLSPRNRKE+DRRERDYR+R+YRGNGRSKERHDRDGGRRR 
Sbjct: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEYDRRERDYREREYRGNGRSKERHDRDGGRRRH 240

Query: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275
           GSPRRSRSRSPVI REGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSRSPVIAREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. NCBI nr
Match: XP_038900064.1 (splicing factor U2af small subunit B-like [Benincasa hispida])

HSP 1 Score: 528 bits (1359), Expect = 1.49e-188
Identity = 269/275 (97.82%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
           RRKLFGRYRGYR SRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKER DRDGGRRR 
Sbjct: 181 RRKLFGRYRGYRRSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERQDRDGGRRRH 240

Query: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275
           GSPRRSRS  PV VREGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRS--PVTVREGSEERRARIEQWNREREEK 273

[Close]

BLAST of Chy7G132630 vs. NCBI nr
Match: XP_022142994.1 (splicing factor U2af small subunit B-like [Momordica charantia])

HSP 1 Score: 510 bits (1314), Expect = 1.12e-181
Identity = 263/278 (94.60%), Postives = 268/278 (96.40%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFGRYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDR---DGGR 240
           RRKLFGRYRGYR SRSRSRSLSPRNRK++DRRERD+RDRD+RGNGRSKER+DR   DGGR
Sbjct: 181 RRKLFGRYRGYRRSRSRSRSLSPRNRKDYDRRERDFRDRDFRGNGRSKERYDRYDRDGGR 240

Query: 241 RRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275
           RR GSPRRSRS     VREGSEERRARIEQWNREREEK
Sbjct: 241 RRHGSPRRSRS----PVREGSEERRARIEQWNREREEK 274

[Close]

BLAST of Chy7G132630 vs. NCBI nr
Match: XP_022941119.1 (splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022941120.1 splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022941121.1 splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022981902.1 splicing factor U2af small subunit B-like [Cucurbita maxima] >XP_022981903.1 splicing factor U2af small subunit B-like [Cucurbita maxima] >XP_022981905.1 splicing factor U2af small subunit B-like [Cucurbita maxima] >KAG7037979.1 Splicing factor U2af small subunit A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 505 bits (1300), Expect = 1.58e-179
Identity = 262/279 (93.91%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+CDNLADHMIGNVYVQFREED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNICDNLADHMIGNVYVQFREED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 181 RRKLFG-RYRGYRPSRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKER---HDRDGG 240
           RRKLFG R+RGYR SRSRSRSLSPRNRK++DRRERDYRDRD+RGNGRSKER   +DRDGG
Sbjct: 181 RRKLFGSRFRGYRRSRSRSRSLSPRNRKDYDRRERDYRDRDHRGNGRSKERPDRYDRDGG 240

Query: 241 RRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275
           RRR GSPRRSRS     VREGSEERRARIEQWNREREEK
Sbjct: 241 RRRHGSPRRSRS----PVREGSEERRARIEQWNREREEK 275

[Close]

BLAST of Chy7G132630 vs. TAIR 10
Match: AT5G42820.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 454.5 bits (1168), Expect = 6.0e-128
Identity = 238/283 (84.10%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNVCDNLADHMIGNVYV F+EED
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
            AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++L
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RRKLFGRYRG--YRPSRSRSRSLSPRNRKEHDR-RER-DYRDRDYRGNGR----SKERHD 240
           RRKLFGRYR    R SRSRSRS+SPR ++EH R RER D RDRD  GNG+      ERHD
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 RD-GGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREE 275
           RD GGRRR GSP+  RSRSP  VREGSEERRARIEQWNRER+E
Sbjct: 241 RDGGGRRRHGSPK--RSRSPRNVREGSEERRARIEQWNRERDE 281

[Close]

BLAST of Chy7G132630 vs. TAIR 10
Match: AT5G42820.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 454.5 bits (1168), Expect = 6.0e-128
Identity = 238/283 (84.10%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNVCDNLADHMIGNVYV F+EED
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
            AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++L
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RRKLFGRYRG--YRPSRSRSRSLSPRNRKEHDR-RER-DYRDRDYRGNGR----SKERHD 240
           RRKLFGRYR    R SRSRSRS+SPR ++EH R RER D RDRD  GNG+      ERHD
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 RD-GGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREE 275
           RD GGRRR GSP+  RSRSP  VREGSEERRARIEQWNRER+E
Sbjct: 241 RDGGGRRRHGSPK--RSRSPRNVREGSEERRARIEQWNRERDE 281

[Close]

BLAST of Chy7G132630 vs. TAIR 10
Match: AT1G27650.1 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 447.2 bits (1149), Expect = 9.6e-126
Identity = 238/293 (81.23%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
           GVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+CDNLADHMIGNVYVQF+EED
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
           QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVK++ ++L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 181 RRKLFGRY-RGYR---PSRSRSRSLSPRNRKEHDR-----RERDYRDRD---YR-GNGR- 240
           RRKLFGRY R YR    SRSRSRS+SPRN++++DR     RE  +RDRD   YR G+G+ 
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240

Query: 241 ---SKERHDRDGGR-RRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 276
                ER +RDG R RRQ SP+  R  SP   REGSEERRARIEQWNREREEK
Sbjct: 241 SSERSERQERDGSRGRRQASPK--RGGSPGGGREGSEERRARIEQWNREREEK 291

[Close]

BLAST of Chy7G132630 vs. TAIR 10
Match: AT1G27650.2 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 339.0 bits (868), Expect = 3.7e-93
Identity = 188/243 (77.37%), Postives = 208/243 (85.60%), Query Frame = 0


Query: 51  MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIG 110
           MYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+CDNLADHMIG
Sbjct: 1   MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60

Query: 111 NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
           NVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF
Sbjct: 61  NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120

Query: 171 MHVKMIGKDLRRKLFGRY-RGYR---PSRSRSRSLSPRNRKEHDR-----RERDYRDRD- 230
           MHVK++ ++LRRKLFGRY R YR    SRSRSRS+SPRN++++DR     RE  +RDRD 
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 180

Query: 231 --YR-GNGR----SKERHDRDGGR-RRQGSPRRSRSRSPVIVREGSEERRARIEQWNRER 276
             YR G+G+      ER +RDG R RRQ SP+  R  SP   REGSEERRARIEQWNRER
Sbjct: 181 EFYRHGSGKRSSERSERQERDGSRGRRQASPK--RGGSPGGGREGSEERRARIEQWNRER 240

[Close]

BLAST of Chy7G132630 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 122.5 bits (306), Expect = 5.4e-28
Identity = 100/305 (32.79%), Postives = 153/305 (50.16%), Query Frame = 0


Query: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 68
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P  IT   D +G  
Sbjct: 237 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPG-ITWEQD-EGLE 296

Query: 69  IDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQA 128
               + +  +E+FYED++ E  K+GE+ +  VC N + H+ GNVYV +R  + A  A Q+
Sbjct: 297 YTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQS 356

Query: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEEN---NCNRGGYCNFMH-VKMIGKDLR--- 188
           + GR+++G+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H  +  G D     
Sbjct: 357 INGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFRNPGGDYEWAD 416

Query: 189 -------------RKLFG----RYRGYRPSRSRSRSLSPRNRKEH---DRRERDYRDRDY 248
                          LFG    ++  +  S S + S+S  +   H    RR R  RD D+
Sbjct: 417 HDRPPPRFWIHKMTSLFGYSDEKHMEHESSGSLNDSISDLSTDSHRQPSRRSRS-RDHDH 476

Query: 249 RGNG-----RSKERHDRDGGRRRQGSPRR----------SRSRSPVIVREGSEERRARIE 272
              G     RS++ H       R+   RR          S SR   + RE  +ERR   +
Sbjct: 477 ANVGSTPSYRSRKYHGDTQDSTREDKLRRHAENCHDGDDSPSRDGSLEREMYKERRYAKD 536

The following BLAST results are available for this feature:

BLAST of Chy7G132630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMY5	8.5e-127	84.10	Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B ...	[more]
Q9S709	1.4e-124	81.23	Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A ...	[more]
Q6AUG0	2.6e-112	72.40	Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9ZQW8	6.1e-109	72.95	Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A1A4K8	3.7e-66	52.80	Splicing factor U2AF 35 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1 PE=2 SV=1	[more]

BLAST of Chy7G132630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4P8	2.5e-153	99.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664540 PE=4 SV=1	[more]
A0A5A7VFL1	1.3e-151	98.18	Splicing factor U2af small subunit B-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BUN6	1.3e-151	98.18	splicing factor U2af small subunit B-like OS=Cucumis melo OX=3656 GN=LOC10349385...	[more]
A0A6J1CN17	2.3e-143	94.60	splicing factor U2af small subunit B-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IV82	9.7e-142	93.91	splicing factor U2af small subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Chy7G132630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145565.1	1.82e-194	99.64	splicing factor U2af small subunit B [Cucumis sativus] >KGN55547.1 hypothetical ...	[more]
XP_008453027.1	3.52e-192	98.18	PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >KAA0064675....	[more]
XP_038900064.1	1.49e-188	97.82	splicing factor U2af small subunit B-like [Benincasa hispida]	[more]
XP_022142994.1	1.12e-181	94.60	splicing factor U2af small subunit B-like [Momordica charantia]	[more]
XP_022941119.1	1.58e-179	93.91	splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022941120.1 s...	[more]

BLAST of Chy7G132630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42820.2	6.0e-128	84.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G42820.1	6.0e-128	84.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G27650.1	9.6e-126	81.23	U2 snRNP auxiliary factor small subunit, putative	[more]
AT1G27650.2	3.7e-93	77.37	U2 snRNP auxiliary factor small subunit, putative	[more]
AT1G10320.1	5.4e-28	32.79	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009145	U2 auxiliary factor small subunit	PRINTS	PR01848	U2AUXFACTOR	coord: 165..177 score: 63.29 coord: 75..90 score: 54.26 coord: 103..125 score: 65.61 coord: 18..37 score: 85.68 coord: 37..57 score: 62.34 coord: 130..154 score: 63.64
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 1..275
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 73..142 e-value: 1.5E-4 score: 31.1
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 148..174 e-value: 0.0087 score: 25.3 coord: 13..39 e-value: 0.0068 score: 25.6
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 150..174 e-value: 1.4E-4 score: 21.7 coord: 14..38 e-value: 2.8E-7 score: 30.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 12..40 score: 13.065497
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 148..175 score: 11.413015
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 43..145 e-value: 8.2E-31 score: 108.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 83..139 e-value: 1.2E-7 score: 31.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 44..146 score: 11.05946
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..276
None	No IPR available	PANTHER	PTHR12620:SF35	SPLICING FACTOR U2AF SMALL SUBUNIT A	coord: 1..275
None	No IPR available	CDD	cd12539	RRM_U2AF35B	coord: 44..145 e-value: 2.25687E-60 score: 184.875
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 77..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G132630.1	Chy7G132630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030628	pre-mRNA 3'-splice site binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding