Chy7G131860 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTAAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGAAAACGAACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCTACTGATTTTCGATACGATCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGACATGATGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCCGCCCGTAAATCTCATGCGATTTTGAAACCATGGGGTTGGGGATCTTCAGGGAGTCTCTACCCATTGATTCTAACTGTGTGTATACCGTAATTTGATAAAGGTGTTATTCGTAGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTAATTATGTATTATTTCTATTGTTATTATTAATTAACTGATTATGTTTGCCTCTAATTTCGTTTAGTTTCACTAAACCTTAAATTTGTTCGTTAGATTTAGTTAAATTACTGTTATGTGTACTGATTATTGTTGGTTATGAAGAACTAAAAGATTTGGAAAAAGAGGACTAATCAATGCAGTAATTATATAACCGAATTAAACCTCTCTAATTGATGAATTTGATAATCTTAATAAATATGTACAAACTATTAGTTTCTTCATTCTCCCACCAAATTGGATCGAAGTGATTTGAGAAAATTTAGACTTTTACAATTGATTAATAAATATTCGTTACAAAAAAAATTACAAACACTTAGAAAGTAAATTCAGACCGACCATACAAATCTATATCTTAACATATAGTGAATTATCAACTTAATCATTGTTATTAATATAGTTCAATTTAAACTCTAAACTTTAATTTTTTTTTTGTTTAGTAGGTAGATGAATTATGGAAGGGGGAGTCGTGCATCTCGAAGTAG ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTAAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGAAAACGAACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCTACTGATTTTCGATACGATCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGACATGATGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCCGCCCGTAGATGAATTATGGAAGGGGGAGTCGTGCATCTCGAAGTAG ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTAAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGAAAACGAACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCTACTGATTTTCGATACGATCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGACATGATGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCCGCCCGTAGATGAATTATGGAAGGGGGAGTCGTGCATCTCGAAGTAG MFNHYNPFSFTHKLKSPISCFRPDHDPELHENEHDNPSSPTSPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRHDDEFPIRDFTSRLPASPPPVDELWKGESCISK* Homology
BLAST of Chy7G131860 vs. ExPASy TrEMBL
Match: A0A0A0L4E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652740 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Chy7G131860 vs. ExPASy TrEMBL
Match: A0A5A7VBS3 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00970 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51 Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Chy7G131860 vs. ExPASy TrEMBL
Match: A0A1S3BVQ9 (uncharacterized protein LOC103493778 OS=Cucumis melo OX=3656 GN=LOC103493778 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51 Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Chy7G131860 vs. ExPASy TrEMBL
Match: A0A6J1FP70 (uncharacterized protein LOC111446022 OS=Cucurbita moschata OX=3662 GN=LOC111446022 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 4.4e-36 Identity = 83/116 (71.55%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of Chy7G131860 vs. ExPASy TrEMBL
Match: A0A6J1J1H3 (uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35 Identity = 80/116 (68.97%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of Chy7G131860 vs. NCBI nr
Match: KGN55462.1 (hypothetical protein Csa_012581 [Cucumis sativus]) HSP 1 Score: 234 bits (598), Expect = 1.77e-77 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Chy7G131860 vs. NCBI nr
Match: XP_008452891.1 (PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo] >KAA0064610.1 DNA ligase [Cucumis melo var. makuwa] >TYK19982.1 DNA ligase [Cucumis melo var. makuwa]) HSP 1 Score: 213 bits (543), Expect = 4.32e-69 Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0
BLAST of Chy7G131860 vs. NCBI nr
Match: XP_023523424.1 (uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164 bits (416), Expect = 1.10e-49 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Chy7G131860 vs. NCBI nr
Match: KAG7031776.1 (hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163 bits (413), Expect = 3.16e-49 Identity = 88/122 (72.13%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of Chy7G131860 vs. NCBI nr
Match: XP_022940408.1 (uncharacterized protein LOC111446022 [Cucurbita moschata] >KAG6608139.1 hypothetical protein SDJN03_01481, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 163 bits (413), Expect = 3.26e-49 Identity = 88/122 (72.13%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of Chy7G131860 vs. TAIR 10
Match: AT5G11070.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10 Identity = 49/122 (40.16%), Postives = 63/122 (51.64%), Query Frame = 0
BLAST of Chy7G131860 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 46/136 (33.82%), Postives = 62/136 (45.59%), Query Frame = 0
BLAST of Chy7G131860 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04 Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of Chy7G131860 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein ) HSP 1 Score: 40.8 bits (94), Expect = 9.8e-04 Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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