Chy7G130320 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G130320
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	serine carboxypeptidase-like 13 isoform X1
Location	chrH07: 1642684 .. 1643343 (-)
RNA-Seq Expression	Chy7G130320
Synteny	Chy7G130320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACCTCAATAATAATATTTTTCTCCGTCGCCGCTCCATTTCCATGGCCTTCGCCACCGTCCTTTTCCCACCCTCTCTTTTCCTCCTCCTCCTTTATCGGTTCATCTCCACCGCCCATGCCACCAGAGGATCATACTCCACAGTCAACCATCTCCCGGGATTTCCAGGACCCCTTCCATTCCAGCTAGAAACTGGGTTGGTTTTGTTATTGCAATTTTAGTTTGCAACTTCCTCTTCTTCATAACCTTTCAATTATATATACACATATATATATTTGTTTTCGAAATTTTGAAATGAAACAGATATGTGGGTGTGGGAGATTCAGATGGGTTTCAGATATTTATCTATTTAAATGAAAGGTCCCATAAGTTTTAAGGAAGACGAGGAGGCAAACAAGGAGGGCATTCCTCAGCTAATCTTAAACCCTTGCTCATGGACCAAGGTAATTAATTATAGTATAATGATTATTAATATATTTTAATTAAAGTTTGTTTGTTTGTTCTTCCTAAATTTATGGTTAATTAGACTAATTTTCATTAATGGTAATGAAATGCTAGAATTCTAGCATATTGTTATAGTTTTACCTGCGGGGACTGAATTTTCATATGATACAATTACTCCTTCCTCTTTTAAGCCAGGAGATTTTAGTCAAATTCAA

mRNA sequence

ATGTACCTCAATAATAATATTTTTCTCCGTCGCCGCTCCATTTCCATGGCCTTCGCCACCGTCCTTTTCCCACCCTCTCTTTTCCTCCTCCTCCTTTATCGGTTCATCTCCACCGCCCATGCCACCAGAGGATCATACTCCACAGTCAACCATCTCCCGGGATTTCCAGGACCCCTTCCATTCCAGCTAGAAACTGGGTTGGAAGACGAGGAGGCAAACAAGGAGGGCATTCCTCAGCTAATCTTAAACCCTTGCTCATGGACCAAGCATATTGTTATAGTTTTACCTGCGGGGACTGAATTTTCATATGATACAATTACTCCTTCCTCTTTTAAGCCAGGAGATTTTAGTCAAATTCAA

Coding sequence (CDS)

ATGTACCTCAATAATAATATTTTTCTCCGTCGCCGCTCCATTTCCATGGCCTTCGCCACCGTCCTTTTCCCACCCTCTCTTTTCCTCCTCCTCCTTTATCGGTTCATCTCCACCGCCCATGCCACCAGAGGATCATACTCCACAGTCAACCATCTCCCGGGATTTCCAGGACCCCTTCCATTCCAGCTAGAAACTGGGTTGGAAGACGAGGAGGCAAACAAGGAGGGCATTCCTCAGCTAATCTTAAACCCTTGCTCATGGACCAAGCATATTGTTATAGTTTTACCTGCGGGGACTGAATTTTCATATGATACAATTACTCCTTCCTCTTTTAAGCCAGGAGATTTTAGTCAAATTCAA

Protein sequence

MYLNNNIFLRRRSISMAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGLEDEEANKEGIPQLILNPCSWTKHIVIVLPAGTEFSYDTITPSSFKPGDFSQIQ

Homology

[Close]

BLAST of Chy7G130320 vs. ExPASy Swiss-Prot
Match: Q9C7Z9 (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana OX=3702 GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 42/143 (29.37%), Postives = 53/143 (37.06%), Query Frame = 0


Query: 27  LFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGL------------------- 86
           L LLLL + +  +     S S +++LPGF G LPF LETG                    
Sbjct: 7   LKLLLLLQLLLLSQHDVDSASVISYLPGFEGLLPFHLETGYIGVGEGEKVQLFYYFIKSE 66

Query: 87  ----ED----------------------------EEANKEGIPQLILNPCSWTKHIVIVL 116
               ED                             E    G+P L+    SWTK   I+ 
Sbjct: 67  NNPEEDPLIIWLTGGPACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIF 126

[Close]

BLAST of Chy7G130320 vs. ExPASy TrEMBL
Match: A0A0A0KZZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644620 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MYLNNNIFLRRRSISMAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVN-HLPGFPGPL 60
           MYL+NNI LRRRSISMAF TV+FP SLFLL L RFISTAHATRGSYSTVN +LPGFPG L
Sbjct: 1   MYLSNNISLRRRSISMAFPTVVFPSSLFLLFLSRFISTAHATRGSYSTVNQYLPGFPGLL 60

Query: 61  PFQLETGLEDEEANKEGIPQLILNPCSWTKHIVIVLPAGTEFSYDTITPSSFKPGDFSQI 120
           PFQLETGLEDEEANKEGIPQLILNP SWTKHIVIVLP GT FSYDTITPSSFKPGDFSQI
Sbjct: 61  PFQLETGLEDEEANKEGIPQLILNPYSWTKHIVIVLPEGTGFSYDTITPSSFKPGDFSQI 120

[Close]

BLAST of Chy7G130320 vs. ExPASy TrEMBL
Match: A0A1S3BV57 (serine carboxypeptidase-like 13 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493611 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23
Identity = 78/160 (48.75%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 121
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. ExPASy TrEMBL
Match: A0A1S3BUD3 (serine carboxypeptidase-like 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493611 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23
Identity = 78/160 (48.75%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 121
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. ExPASy TrEMBL
Match: A0A1S3BUB1 (serine carboxypeptidase-like 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493611 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23
Identity = 78/160 (48.75%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 121
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. ExPASy TrEMBL
Match: A0A1S3BVI9 (serine carboxypeptidase-like 18 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493611 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23
Identity = 78/160 (48.75%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 121
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. NCBI nr
Match: KGN55285.1 (hypothetical protein Csa_011999 [Cucumis sativus])

HSP 1 Score: 207 bits (527), Expect = 7.86e-67
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MYLNNNIFLRRRSISMAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVN-HLPGFPGPL 60
           MYL+NNI LRRRSISMAF TV+FP SLFLL L RFISTAHATRGSYSTVN +LPGFPG L
Sbjct: 1   MYLSNNISLRRRSISMAFPTVVFPSSLFLLFLSRFISTAHATRGSYSTVNQYLPGFPGLL 60

Query: 61  PFQLETGLEDEEANKEGIPQLILNPCSWTKHIVIVLPAGTEFSYDTITPSSFKPGDFSQI 119
           PFQLETGLEDEEANKEGIPQLILNP SWTKHIVIVLP GT FSYDTITPSSFKPGDFSQI
Sbjct: 61  PFQLETGLEDEEANKEGIPQLILNPYSWTKHIVIVLPEGTGFSYDTITPSSFKPGDFSQI 120

[Close]

BLAST of Chy7G130320 vs. NCBI nr
Match: XP_008452658.1 (PREDICTED: serine carboxypeptidase-like 18 isoform X4 [Cucumis melo])

HSP 1 Score: 116 bits (291), Expect = 3.35e-28
Identity = 79/160 (49.38%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 120
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. NCBI nr
Match: XP_008452657.1 (PREDICTED: serine carboxypeptidase-like 13 isoform X3 [Cucumis melo])

HSP 1 Score: 116 bits (291), Expect = 4.93e-28
Identity = 79/160 (49.38%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 120
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. NCBI nr
Match: XP_008452656.1 (PREDICTED: serine carboxypeptidase-like 13 isoform X2 [Cucumis melo])

HSP 1 Score: 116 bits (291), Expect = 5.34e-28
Identity = 79/160 (49.38%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 120
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. NCBI nr
Match: XP_008452655.1 (PREDICTED: serine carboxypeptidase-like 13 isoform X1 [Cucumis melo])

HSP 1 Score: 116 bits (291), Expect = 7.06e-28
Identity = 79/160 (49.38%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 16  MAFATVLFPPSLFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETG--------- 75
           MAFAT+LF      LLL +F STA    GSYSTVNHLPGFPGPLPFQLETG         
Sbjct: 1   MAFATLLF------LLLSQFFSTA----GSYSTVNHLPGFPGPLPFQLETGYVGVGDSDE 60

Query: 76  -------------------------------------------LEDEEANKEGIPQLILN 120
                                                       ++EEA KE IPQLILN
Sbjct: 61  FQIFHYFVKSDQNPKTDPLLLWLTGGPGCSALSGLVFEIGPISFKEEEA-KESIPQLILN 120

[Close]

BLAST of Chy7G130320 vs. TAIR 10
Match: AT1G33540.1 (serine carboxypeptidase-like 18 )

HSP 1 Score: 47.4 bits (111), Expect = 9.6e-06
Identity = 42/143 (29.37%), Postives = 53/143 (37.06%), Query Frame = 0


Query: 27  LFLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGL------------------- 86
           L LLLL + +  +     S S +++LPGF G LPF LETG                    
Sbjct: 7   LKLLLLLQLLLLSQHDVDSASVISYLPGFEGLLPFHLETGYIGVGEGEKVQLFYYFIKSE 66

Query: 87  ----ED----------------------------EEANKEGIPQLILNPCSWTKHIVIVL 116
               ED                             E    G+P L+    SWTK   I+ 
Sbjct: 67  NNPEEDPLIIWLTGGPACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIF 126

[Close]

BLAST of Chy7G130320 vs. TAIR 10
Match: AT2G22980.1 (serine carboxypeptidase-like 13 )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 28 FLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGL----EDEE 72
          FLLLL   I + HA  G  S V  LPGF GPLPF+LETG     E+EE
Sbjct: 7  FLLLLIVLILSHHAHSG--SIVKFLPGFEGPLPFELETGYIGIGEEEE 52

[Close]

BLAST of Chy7G130320 vs. TAIR 10
Match: AT2G22980.2 (serine carboxypeptidase-like 13 )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 28 FLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGL----EDEE 72
          FLLLL   I + HA  G  S V  LPGF GPLPF+LETG     E+EE
Sbjct: 7  FLLLLIVLILSHHAHSG--SIVKFLPGFEGPLPFELETGYIGIGEEEE 52

[Close]

BLAST of Chy7G130320 vs. TAIR 10
Match: AT2G22980.3 (serine carboxypeptidase-like 13 )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 28 FLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGL----EDEE 72
          FLLLL   I + HA  G  S V  LPGF GPLPF+LETG     E+EE
Sbjct: 7  FLLLLIVLILSHHAHSG--SIVKFLPGFEGPLPFELETGYIGIGEEEE 52

[Close]

BLAST of Chy7G130320 vs. TAIR 10
Match: AT2G22980.4 (serine carboxypeptidase-like 13 )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 28 FLLLLYRFISTAHATRGSYSTVNHLPGFPGPLPFQLETGL----EDEE 72
          FLLLL   I + HA  G  S V  LPGF GPLPF+LETG     E+EE
Sbjct: 7  FLLLLIVLILSHHAHSG--SIVKFLPGFEGPLPFELETGYIGIGEEEE 52

The following BLAST results are available for this feature:

BLAST of Chy7G130320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7Z9	1.3e-04	29.37	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana OX=3702 GN=SCPL18 PE=2 S...	[more]

BLAST of Chy7G130320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZZ0	7.6e-51	89.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644620 PE=4 SV=1	[more]
A0A1S3BV57	3.9e-23	48.75	serine carboxypeptidase-like 13 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034936...	[more]
A0A1S3BUD3	3.9e-23	48.75	serine carboxypeptidase-like 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034936...	[more]
A0A1S3BUB1	3.9e-23	48.75	serine carboxypeptidase-like 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034936...	[more]
A0A1S3BVI9	3.9e-23	48.75	serine carboxypeptidase-like 18 isoform X4 OS=Cucumis melo OX=3656 GN=LOC1034936...	[more]

BLAST of Chy7G130320 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55285.1	7.86e-67	89.17	hypothetical protein Csa_011999 [Cucumis sativus]	[more]
XP_008452658.1	3.35e-28	49.38	PREDICTED: serine carboxypeptidase-like 18 isoform X4 [Cucumis melo]	[more]
XP_008452657.1	4.93e-28	49.38	PREDICTED: serine carboxypeptidase-like 13 isoform X3 [Cucumis melo]	[more]
XP_008452656.1	5.34e-28	49.38	PREDICTED: serine carboxypeptidase-like 13 isoform X2 [Cucumis melo]	[more]
XP_008452655.1	7.06e-28	49.38	PREDICTED: serine carboxypeptidase-like 13 isoform X1 [Cucumis melo]	[more]

BLAST of Chy7G130320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33540.1	9.6e-06	29.37	serine carboxypeptidase-like 18	[more]
AT2G22980.1	1.1e-04	56.25	serine carboxypeptidase-like 13	[more]
AT2G22980.2	1.1e-04	56.25	serine carboxypeptidase-like 13	[more]
AT2G22980.3	1.1e-04	56.25	serine carboxypeptidase-like 13	[more]
AT2G22980.4	1.1e-04	56.25	serine carboxypeptidase-like 13	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G130320.1	Chy7G130320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004180	carboxypeptidase activity