Chy7G130120 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G130120
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH07: 1497803 .. 1498332 (-)
RNA-Seq Expression	Chy7G130120
Synteny	Chy7G130120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGTTGGTGGGGGCAAGGGAAAGGGGAAGAAGAGGCAACAGAAATGGATAATTAGAAAAGAGAAAAAGGGGGGGTCGGCCGACCCAAGTGGAGAAACAGGACGCACAAGTGGGATTGGTTTGTTAAGTTAAGATGGGATTGGAAATTTCAATATTTGGAGAAGTTGGGAATTGGATTGATGGCATGTAATGGAAATTGGAAAGTGGAAATGATGAGAGCCACACCACCATTGCCGCCGCATCCGCACCCGCCGCCCTTCACAATACAGAGACCCCCAAAAGTGGAGCTCAGAATCTTTGTGGATTTCATACCATTTTATCACTTATTATTTCTCTGCACTCTATTTTATTTTATTTTAAGAGAAGTTATTTTTGTTACTTATTTACTTTTTCTTTTTGTTTGTAATTACCAATTAGTGAGTAATATCTGTGGCACATTCTCAAACATTGTGCATGTTAATACTGAAATTCAATGTGTTTCTTTTCTAAGAAAGGAGATTTGATTGTGTGTTTTTTAGATCACTTGA

mRNA sequence

ATGTGTGTTGGTGGGGGCAAGGGAAAGGGGAAGAAGAGGCAACAGAAATGGATAATTAGAAAAGAGAAAAAGGGGGGGTCGGCCGACCCAAGTGGAGAAACAGGACGCACAAGTGGGATTGGTTTGTTAAGTTAAGATGGGATTGGAAATTTCAATATTTGGAGAAGTTGGGAATTGGATTGATGGCATGTAATGGAAATTGGAAAGTGGAAATGATGAGAGCCACACCACCATTGCCGCCGCATCCGCACCCGCCGCCCTTCACAATACAGAGACCCCCAAAAGTGGAGCTCAGAATCTTTGTGGATTTCATACCATTTTATCACTTATTATCACTTGA

Coding sequence (CDS)

ATGTGTGTTGGTGGGGGCAAGGGAAAGGGGAAGAAGAGGCAACAGAAATGGATAATTAGAAAAGAGAAAAAGGGGGGGTCGGCCGACCCAAGTGGAGAAACAGGACGCACAAGTGGGATTGGTTTGTTAAGTTAAGATGGGATTGGAAATTTCAATATTTGGAGAAGTTGGGAATTGGATTGATGGCATGTAATGGAAATTGGAAAGTGGAAATGATGAGAGCCACACCACCATTGCCGCCGCATCCGCACCCGCCGCCCTTCACAATACAGAGACCCCCAAAAGTGGAGCTCAGAATCTTTGTGGATTTCATACCATTTTATCACTTATTATCACTTGA

Protein sequence

MCVGGGKGKGKKRQQKWIIRKEKKGGSADPSGETGRTSGIGLLS*DGIGNFNIWRSWELD*WHVMEIGKWK**EPHHHCRRIRTRRPSQYRDPQKWSSESLWISYHFITYYHLX

Homology

[Close]

BLAST of Chy7G130120 vs. ExPASy TrEMBL
Match: A0A0A0L0G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642440 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-04
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 1  MCVGGGKGKGKKRQQKWIIRKEKKGGSADP 31
          MCVGGGKGKGKKRQQKWIIRK +KGG   P
Sbjct: 1  MCVGGGKGKGKKRQQKWIIRKREKGGVGRP 30

[Close]

BLAST of Chy7G130120 vs. NCBI nr
Match: KGN55263.1 (hypothetical protein Csa_012455 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 2.52e-06
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 1  MCVGGGKGKGKKRQQKWIIRKEKKGGSADP 30
          MCVGGGKGKGKKRQQKWIIRK +KGG   P
Sbjct: 1  MCVGGGKGKGKKRQQKWIIRKREKGGVGRP 30

The following BLAST results are available for this feature:

BLAST of Chy7G130120 vs.


Match Name	E-value	Identity	Description

BLAST of Chy7G130120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0G8	3.9e-04	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642440 PE=4 SV=1	[more]

BLAST of Chy7G130120 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55263.1	2.52e-06	83.33	hypothetical protein Csa_012455 [Cucumis sativus]	[more]

BLAST of Chy7G130120 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G130120.1	Chy7G130120.1	mRNA