Chy7G129710 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G129710
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein ROOT INITIATION DEFECTIVE 3
Location	chrH07: 1201275 .. 1208892 (-)
RNA-Seq Expression	Chy7G129710
Synteny	Chy7G129710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATGGGCCTAGTCCATGGTCGAAAAACTTCGGCTCGGCCCAGTCCATTATTAATTTATTTTCGACGAAATTGGATTGTATTGAAGTTGGTTCGTTCGGCAATTCTGCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGGGCTAAATTTCGTTGTGGTTGCCGCGCTGTTTTTCATCCATCACACCGCCATAAAAATATTCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCACAATGGTGCTACTCGTCGCATCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTTTAAGGTACTTGTTATTGTAACGAATTTCAACCCTCTGTTCCTCAATACCCCGCTTGATTAATTTTTCTTCCTACAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTAAATTTTGATTTTATAATATATGCTCTGCCATTAAACTCTAAAATTATTGTCTTCTTATTCTATTCATTGACACATATTCTTGGCTGTAGTATAAGATGAATTGCTCGTTGTTGTAGGTTTTGAGTGGTAGACTGCTTACAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTATTCTCTGAGGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGTATAAAATTTCACCATTTGGCATTATGTTTGTGTGTTTAGGTTTTTATATGGATTGTAGAAATTCTTTTTACAAACACGTTGATTCCAGGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTTTGGCACTCTATTGAATTTAACACTTCTATGTTGATAATGTAATTTTGTGATGATGTGGCCATGTAGTTTGGTTAGTTAATTAGTTTTACAACCACTTTGGAAGTCCAATTGCATTGACTTGGTAAATCGCCTTTTTTTGCAATTACAACAGCTTTACGTTTAAGGTTTGCTTACATCCTCATCTAGGATTTTAGAAACATGTAAAAACATATTATCTAGACTAAGTTTGTGCTGTAACCAAAATGACAATGTATGGGAGGATGAGTTATAGAGTGCACAGAGGTGGATATAATTATCCAACTATGATTTATATCAATATGCAGTCTGTTCTTGGATTTTCACATTTTTAATAGTGATGTGGATATACTGTATATGAAACATTTTTGTTTACGACTTATCACCAATGAATAATGACTACTTTCCTATCCTAACTTCACTCATATCGAATTTTCTTTGGTGAGTTATATGTTGTATGCTAACTTGGCTTTTGTAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGGTCTGTATTTATCTCTTTGATTTTCTTTCATTGTCGACCTGTTCTTCTTTCAACTTTAATTAATATATCATCAGTTAAACATCAAAGATTAAGTTTTCAATTTCCTCTAATTTTGTTTCTTCTTTCCGGTTTCAAGAATCATCTTTTCTTTGTTTCATGCAATATATATTAGATTGTCTAATGATATAATTATGCAATGAAAAGTTGGGGAATTTCAAGTTGCTATTAGTTTGGTGCACATGCACTAGGATTATTTGTAATGGTGTCTTGATTTCTTAAAAACTAGGAATTAGTATTCTACTTCCAAGTCAATCGTTGTTGTGTCTCGGTTGCTAAACAGCTACTCTTTTTATGGTTTCTTTAAAGAAACTGGACGTGTTTTTTTATATGTAGTATAGGTTTTTAATGCAAGATATATTATCTTCTTGGATTTGCTATATTGTCCAACTTATTGTCCTTTTGTATTCTTACTAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATTAGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTAATAAGCCATTTAAATATTATTACTTGAATAAGTTTAGTTTCTGTGAAATTGTATTTTGTTTTCATTTACGAACCATGTGACCTTGTGAATAAATATTATTTTTTGCATAAATACCTATACCAAGTTTTTTTTCATTTTCAAATTTAACCTTAGCTGAGGCTTAAGGTACGTCTTTCATTATTTTGTTTCCTCTGCTTTGTAATTCTAATTGTTAGAGATTGGAGGATGTTATATTCAAGTTTTTTAAAAATTATGTTTTGAAGCTTTATACTCTTTTTTATCTCTTTCTTATGAACTTTATTTGAGCATTTTAAGTTAAATCATTTATATATAATTTTTTTAGATGTACATTCATTTATTTAATTTTCTGCATATAAATTAACCTAGCAAGTGCAATTTATCTTTTGCTTAATTCATGACCAGCATTTTTATTATAATATGATCTTAATGAAAATACACCAATGGTCCATACGCAGGTCCTGTAAATAATATACTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCTCTCGCAAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGGTGCTTTCTTTTTTTTCTATCCCCCTTCCCTGTGGTCCTAAAATTCCTTTCTTTTTTTCCTGGCTTAATTAGTTTGTATCTTATGCTGTTCTGGGATAGACACACAATATTTTGATATCCCATAATCCTCTATACACTTAAAACATGTTCTAACATGCGGTTTTCTGTATTTCAGCAACAGGGTTCTGCTGCCACAGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGAAGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGAGCGTCACTTTCACTTCTCTTATGTGTTCTATTTGTTTTATCTATCTCCAGTCCTAGAAATTGTATAATCATGTCGAAACAAATTCGATGGAATTGTTAGGAAGTATAAGTCATCGTTGATTAATTTAAATTCCAAAATCCCATTTTTGGGATAAGAGATCTGTACATGGTGAATACAATTCCTTGATTTATAAGATTATTTTTTGTTATGGGGGAATTCCTTATTCATCTTGTATGTTCTGGATTTGTTATGATTTTTGGTGCAATCTATTTTCCATGATTGGCAAGGTCCAAGAAGTGCCAAATATTTTCCCAGCCTAGCTAAAAAGAAATGAGTCGAGAAAAATTGTAGCTCGAAGAAACCAACGTCTGGTATTGAAAAATAGTTGTGATACCCAAAACAAATCAATCAAGTGGAAAAAGAGATGCTGTTTGATGGAATGATTCGTGCAAAAATAACAGAAGCAGTCCAAAGTTGAATGGTGATGGTATACGATTATCATGTAAAAGAAAAAGTGGGTTGAAGTTGAGATTTCAAAGGGACCATTACCAATCTGTGTCTGTTTGTTATAAATTTGTGGGTCTGTTTCTGTTTGTGTGTTGTATTATTTTAACATATCATATCATCATATTAACAAACAACTATTAATATATATGCTGAGTGGGGAAGAAAAAGATAAGGTGGTGTAAGCAGAGAAAAAGAAACCTCTCAATAACAAACCCTCTCTCTCTTTCTACCATTGGATTCTTTTTTATCTAAAAGAACATCTTCTGCACCAGAACATATCTCTTTATTCACATTTTATGTATGTGCTCCAAACCCCTTTACATATGATATTATAATTTATTACTCTCCCCTTGTTTGTCACATATCCAGAGAGATTTCCTTGATCTTGGCACCAAATCATACTGTTGGCGCCATAGGAATAATTATATATTATACTGTATAGCTTTTGATTGAGTTTAATGATTGTAGCAGATTAAAAGTCAGGACCCAACACTTAAAAGAGTAAATTCAGTTCAACCAAGTGCTATTAGATGCTCAGGTATTGTGCATCTGCAAGTGAAATTTTAGAAAGTTTTTTAATTTGACTATTGTTCTTTTTTTTTTTTTTGCCTTAAATTAAAAGAGAGTTCGTTGGCAATATAATACTTCCACATTAAGCAGGTAGGCTTCTTCAGAACCTGATCCTGATATGCCTCGATCAGCGTTCCCAATCCCAACATTATCAGTGAGAGAAATTCACCCCTATTGCACCAACTTCCCTTCCTAGGCTTTCCTAATCTCAAACGGTGACGTATTTGGATCAAAATCCCCACTGTTCTTCTCTCCAACTTGGTTTCCTCCTCTGCTGTTGATTGCTGCCACGTACTCACCGCCGGAGAATCAAACGGCTCATTATACTCACCGTCAAGTGTAAAAAAAAAAACTTTGAACTTTGCTCCCTTCTCTGTTAGATTTCTGACAACTATCATGTGGGGTGGGGCTCTTAGGTTCTTCTAAAAGAAAAGAAAGAATGAAAAATAAAAAGAAGCGATCTTTTCTTTTTTGGGAGTTTGGACTGCACCGAGATTTTAGGACTCAAGAAACAGAACGATGCATGCACTATAGAAAGAGAGGAGTTAAGAAAAAAGGCCATTTTTCTTCAGTTCATCAACGTATATATATTTAGGGTGATAAATTCAAATATGTTATTTTCACTCTTGGACAACTTTTTAAAAATAATTAATATAAACTACACTCATATCGTACCTTGATGGGTCTAATTTGCTTAGCTATGCATGTAATGAAAACACAACAAACAATAATATATAAGAGAGTAATATTGCACGGATGATCAAGTGTTGTTGATATTCATTATGGAGTGGAACCAATACAAATATTTTATAAACAAACGATTACTACTCTAAATTAACAGCTAATAAAAATTAAAAATAGAACTAATTAATTTCTTGCAAATCAAGTTTGCACTATTTGTTTACACGAGTTAGTGATGCTACAATTTTTCATTATTCAATATTTCTCCTATGTGTGCTGAGTGAAACTCTTGAGATTGTAATTAAGTGGGAGGTTAGAATAATAATGTTGTAATATAGATTGGAGTGACTCTTTGCACAATTATTTCATTTGGAGGTATGTTATTTTCTTGACCATATTTGATGTTTAGTAGTTTCATTTTTCTCTAACCATTTCGTGATCATTATTAGAATTGAACTGCAGTAGAGCTCCAACAAGACTCTTTGCTTCACTTTTTCTTTTGCATGATTTTTTCCAATAAAATCCTACCTTTCTTATACTTGAAAGAAAAATTAAATGGAAAAAAATCATTTTAACCTTCTAATTTTATTGAATTCCGATTCTATTTTATATATGTGTTAGTAATCTTGAACTCTCTAATGATTTATCAATCCATATTCGAGGACGATTATAAAACATAAATATGACATGAAATTGATAAAATCTTAGAGAAAAATGTGGTGATTGCATTTTTTTAGTTAAAAACTAATAAATTTTAGTAAAATTGTTTAATGCCAATCAAGGAAGGAGTCAAACTGATAAGCTTAGCTTAGAAAGATTTTTTTGTACCAAGAGATAAAATTGAAAGGTTAATTAAATCCAATTAATTGTGTACAAATTATTATTATTGTTAACTTTTACTTATTGAATAGGAAAAAGAAAAAAAAAGATGAAAAAAGAGAGGCATTTTGGTAGAATCGGTGGAGAGATCATAACCGTTAATTTAGTGGGGCATTTTCATATGACATAACACCATATCAACAGCCTTGGATTGATGTGCAATAATATATTTCTGATAGGGAAAAAAAAAAGGAATTTTGATATCTCATTGTGTATAGGCAAAAAGATAAGATGTTTGTAACAATATTTTAATCCAAAGCATTGGGAGTTTCTGCTTAGGCATCAATCTCACCCTCTTCCTCCTTATCCTGTTCCCTCCCCTCTCCTTTCAACGGCTATGATCACTTTGATCATATCACCATTGTCGTTTCAGATGATCATCTTCTCATTTCTCCTTGCAATAAATCACTATTTATCGTTTCCATGAATGCCATTTGATAGAGACTTTCTTTTCGAATAAATAAATAAGAAAAAAGCTGATGCCTAAAAAAGGAAATTTCTTTTCTTCTCCTCTTTTTTTTTTCCTTTCCCTCTTTGGAAATTAATAAAAAAAAATAGTGATGTACTGTTCAACCCATTTGTTATATATGGAATGCCCATCAAATGATAGCGTGTTCTTCCTTCTCTCTCTCTCTCTCTCTCTTTCTGTTTCTCTCTTCACCATCTCCAATTTTGTGAATTTTGTACACCAAATATAACTGAGGATCGGATCGGGATTGGATTGGATCAGGTCGGAGATTCCTTTTTCTTTAATCCTATGGAAAATGATGATTTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCATCCTCTGATTTCAGCTCAACTACGACCGATCACCCACATTGCCATTTGGATTCCTCTTCATCGCCTCCATTATTCATCAACAACAACAGTAACAACAGCAACAGCAACAACAACAACCCACCTTATAATTTCCCCCAACAATCTACTGTTCCATTCCCGGGAACCTCCAGTTCACGGTGGCGAAACTCCGGTAGTTGTGAAACAGAGAGTTTGCAGAAACAGAGGTCGGTAGCGGCTATGAGGGAGATGATATTCAGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCCGTGAAGCCACCAAAAAGAAGAAACGTGAAGATTTCAACTGACCCACAAAGTGTAGCGGCTCGACATAGGAGAGAAAGAATTAGCGAAAGAATTAGAATACTTCAAAGATTAGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAAACCCAAGTTCAGTCTCTTGAAAGAGCCGCCGGGAACCGCCCAATCACCGGTGGTGGTGCACCCAGTAGCGTTGGGTTCCCTTTGGAAATGTCAACGGGAAGTTACATCCCTAATCATCATCAATCCCAACCTTGA

mRNA sequence

ATGAAAAATGGGCCTAGTCCATGGTCGAAAAACTTCGGCTCGGCCCAGTCCATTATTAATTTATTTTCGACGAAATTGGATTGTATTGAAGTTGGTTCGTTCGGCAATTCTGCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGGGCTAAATTTCGTTGTGGTTGCCGCGCTGTTTTTCATCCATCACACCGCCATAAAAATATTCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCACAATGGTGCTACTCGTCGCATCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTTTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTGAGTGGTAGACTGCTTACAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTATTCTCTGAGGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATTAGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTCCTGTAAATAATATACTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCTCTCGCAAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACAGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATTTTGGACTGCACCGAGATTTTAGGACTCAAGAAACAGAACGATGCATGCACTATAGAAAGAGAGGAGTTAAGAAAAAAGGCCATTTTTCTTCAGTTCATCAACGTCGGAGATTCCTTTTTCTTTAATCCTATGGAAAATGATGATTTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCATCCTCTGATTTCAGCTCAACTACGACCGATCACCCACATTGCCATTTGGATTCCTCTTCATCGCCTCCATTATTCATCAACAACAACAGTAACAACAGCAACAGCAACAACAACAACCCACCTTATAATTTCCCCCAACAATCTACTGTTCCATTCCCGGGAACCTCCAGTTCACGGTGGCGAAACTCCGGTAGTTGTGAAACAGAGAGTTTGCAGAAACAGAGGTCGGTAGCGGCTATGAGGGAGATGATATTCAGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCCGTGAAGCCACCAAAAAGAAGAAACGTGAAGATTTCAACTGACCCACAAAGTGTAGCGGCTCGACATAGGAGAGAAAGAATTAGCGAAAGAATTAGAATACTTCAAAGATTAGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAAACCCAAGTTCAGTCTCTTGAAAGAGCCGCCGGGAACCGCCCAATCACCGGTGGTGGTGCACCCAGTAGCGTTGGGTTCCCTTTGGAAATGTCAACGGGAAGTTACATCCCTAATCATCATCAATCCCAACCTTGA

Coding sequence (CDS)

ATGAAAAATGGGCCTAGTCCATGGTCGAAAAACTTCGGCTCGGCCCAGTCCATTATTAATTTATTTTCGACGAAATTGGATTGTATTGAAGTTGGTTCGTTCGGCAATTCTGCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGGGCTAAATTTCGTTGTGGTTGCCGCGCTGTTTTTCATCCATCACACCGCCATAAAAATATTCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCACAATGGTGCTACTCGTCGCATCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTTTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTGAGTGGTAGACTGCTTACAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTATTCTCTGAGGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATTAGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTCCTGTAAATAATATACTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCTCTCGCAAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACAGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATTTTGGACTGCACCGAGATTTTAGGACTCAAGAAACAGAACGATGCATGCACTATAGAAAGAGAGGAGTTAAGAAAAAAGGCCATTTTTCTTCAGTTCATCAACGTCGGAGATTCCTTTTTCTTTAATCCTATGGAAAATGATGATTTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCATCCTCTGATTTCAGCTCAACTACGACCGATCACCCACATTGCCATTTGGATTCCTCTTCATCGCCTCCATTATTCATCAACAACAACAGTAACAACAGCAACAGCAACAACAACAACCCACCTTATAATTTCCCCCAACAATCTACTGTTCCATTCCCGGGAACCTCCAGTTCACGGTGGCGAAACTCCGGTAGTTGTGAAACAGAGAGTTTGCAGAAACAGAGGTCGGTAGCGGCTATGAGGGAGATGATATTCAGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCCGTGAAGCCACCAAAAAGAAGAAACGTGAAGATTTCAACTGACCCACAAAGTGTAGCGGCTCGACATAGGAGAGAAAGAATTAGCGAAAGAATTAGAATACTTCAAAGATTAGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAAACCCAAGTTCAGTCTCTTGAAAGAGCCGCCGGGAACCGCCCAATCACCGGTGGTGGTGCACCCAGTAGCGTTGGGTTCCCTTTGGAAATGTCAACGGGAAGTTACATCCCTAATCATCATCAATCCCAACCTTGA

Protein sequence

MKNGPSPWSKNFGSAQSIINLFSTKLDCIEVGSFGNSAHPIQLLPAAVSFGAKFRCGCRAVFHPSHRHKNIQTKLKTETLFSSSQLTMVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYRAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKGPVNNILVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVIIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRKILDCTEILGLKKQNDACTIEREELRKKAIFLQFINVGDSFFFNPMENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLFINNNSNNSNSNNNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAGNRPITGGGAPSSVGFPLEMSTGSYIPNHHQSQP*

Homology

[Close]

BLAST of Chy7G129710 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 1.5e-139
Identity = 247/423 (58.39%), Postives = 313/423 (74.00%), Query Frame = 0


Query: 89  VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSV 148
           + ++ASSSID GIG WDL TG+EQL++K CASP HGL  VG KFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 149 LYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYR 208
            YWSW KPQ EVKS+P EPI ALA+N+EGTY+VGGG SGDIYLWEV +G+LL KWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 209 AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 268
           +VTCLVFS DDSLLVSGS+DG IRVWSLI +FDD  +++   LYEH+F  H + VTDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 269 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 328
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG  VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 329 TAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV 388
             A+NA    +S+YG  +LGS+S + K++T LAYC+ GNLLISGSEDG + VWD ++   
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 389 IRVFRHS----KGPVNNILVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYT 448
           +R   H+    KGPVNNI + ++ +  + + +Q S +    L+PP L K+E    ED   
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPV-EDTMD 362

Query: 449 GVI-IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQH 507
           G++ +DP          SFLS+ ++D+Q+ ELQQQGSAAT ME+ERLK +Y +S QM + 
Sbjct: 363 GIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMNEQ 419

[Close]

BLAST of Chy7G129710 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-44
Identity = 120/227 (52.86%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 551 MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLFI 610
           M+N D+       + MMMQQMEK+PE +++ +P           H    L  S++ P F 
Sbjct: 1   MDNSDIL------MNMMMQQMEKLPEHFSNSNP-------NPNPHNIMMLSESNTHPFFF 60

Query: 611 NNNSNNSNSNNNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFR 670
            N +++    +   P++ P  +    P  SSS     G C   +     ++AAMREMIFR
Sbjct: 61  -NPTHSHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSDNA-----NMAAMREMIFR 120

Query: 671 IAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 730
           IAVMQPIHIDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 121 IAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180

Query: 731 SMLDEAIHYVKFLKTQVQSLERAAGNRPITGGGAPSSVGFPLEMSTG 778
           SMLDEAIHYVKFLK QVQSLE  A    + GGG  +  G  L  + G
Sbjct: 181 SMLDEAIHYVKFLKKQVQSLEEHA---VVNGGGMTAVAGGALAGTVG 205

[Close]

BLAST of Chy7G129710 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.6e-43
Identity = 119/203 (58.62%), Postives = 139/203 (68.47%), Query Frame = 0


Query: 566 MMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLFINNNSNNSNSNNNNPP 625
           MMM QMEK+PEF N    P+S F S   DH      +++ P LF + +  + +S  N P 
Sbjct: 8   MMMHQMEKLPEFCN----PNSSFFS--PDH------NNTYPFLFNSTHYQSDHSMTNEPG 67

Query: 626 YNF-----PQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHID 685
           + +        S++  P T+ S         + +     ++AAMREMIFRIAVMQPIHID
Sbjct: 68  FRYGSGLLTNPSSIS-PNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHID 127

Query: 686 PEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 745
           PEAVKPPKRRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV
Sbjct: 128 PEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 187

Query: 746 KFLKTQVQSLERAAGNRPITGGG 764
           KFLK QVQSLE  A    +TGGG
Sbjct: 188 KFLKKQVQSLEEQA---VVTGGG 194

[Close]

BLAST of Chy7G129710 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-43
Identity = 105/323 (32.51%), Postives = 168/323 (52.01%), Query Frame = 0


Query: 104 WDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWFKPQVEVKSF 163
           W+LH+G+  L Y+   + P GL  + G++L  +QL     +A  +      K Q++ K  
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQR----KDQLQQKIM 82

Query: 164 PAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYRAVTCLVFSEDDSLLV 223
              P+  L ++  G Y++  G +  I+LWEV +G LL     HY+ V+CL F+ D S  +
Sbjct: 83  CPGPVTCLTASPNGLYVL-AGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFI 142

Query: 224 SGSEDGCIRVWSLITVFDDGWQR--EAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSS 283
           SG +D  + VWSL +V      R    +H++ H    H LP+TD+  G+GG  A + +SS
Sbjct: 143 SGGKDCLVLVWSLCSVLQADPSRIPAPRHVWSH----HALPITDLHCGFGGPLARVATSS 202

Query: 284 VDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSD 343
           +D+T K+W +S G+LL +++F   I A+ +D  EH  + GG +G I+   L    P   +
Sbjct: 203 LDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FTWPGQRE 262

Query: 344 YGLH---ILGSI-SNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG 403
              H     G +       VT L+  + G++L+SGS D  +R+WD ++   IR     KG
Sbjct: 263 RSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVA-LKG 322

Query: 404 PVNNILVQQQPLPKSQSTSQGSL 421
           PV N  +   P+    S  + SL
Sbjct: 323 PVTNAAILLAPVSMLSSDFRPSL 334

[Close]

BLAST of Chy7G129710 vs. ExPASy Swiss-Prot
Match: Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-42
Identity = 101/316 (31.96%), Postives = 161/316 (50.95%), Query Frame = 0


Query: 104 WDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSW---FKPQVEV 163
           W+LH+G+  L Y+   + P GL  + G++L  +QL       G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL-------GKNYICAWELQRKDQLQQ 82

Query: 164 KSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYRAVTCLVFSEDDS 223
           K     P+  L ++  G Y++  G S +IYLWEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTSPNGLYVL-AGISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSS 142

Query: 224 LLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISS 283
             +SG +D  +  WSL +V      R       H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFISGGKDCLVLAWSLCSVLQADPSRTPAP--RHVWSRHTLPITDLHCGFGGPLARVATA 202

Query: 284 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL-------N 343
           S+D+T K+W +S G+LL +++F   I A+ +D  EH  + GG DG I+   L        
Sbjct: 203 SLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQRE 262

Query: 344 AKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFR 403
                  ++G    G        VT L+  + G++L+SGS D  +R+WD ++   +R   
Sbjct: 263 KSFQPEQEHGKVFRG----HRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTVT 322

Query: 404 HSKGPVNNILVQQQPL 410
             KGPV N  +   P+
Sbjct: 323 -LKGPVTNACIMLAPV 323

[Close]

BLAST of Chy7G129710 vs. ExPASy TrEMBL
Match: A0A0A0KZT0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639920 PE=4 SV=1)

HSP 1 Score: 854.4 bits (2206), Expect = 3.9e-244
Identity = 417/423 (98.58%), Postives = 418/423 (98.82%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNI-LVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNI LVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 508 ILD 510
           + D
Sbjct: 421 MYD 423

[Close]

BLAST of Chy7G129710 vs. ExPASy TrEMBL
Match: A0A1S3BU36 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4 SV=1)

HSP 1 Score: 832.8 bits (2150), Expect = 1.2e-237
Identity = 406/423 (95.98%), Postives = 413/423 (97.64%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNI-LVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNI LVQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 508 ILD 510
           + D
Sbjct: 421 MYD 423

[Close]

BLAST of Chy7G129710 vs. ExPASy TrEMBL
Match: A0A5D3D9F7 (Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003270 PE=4 SV=1)

HSP 1 Score: 830.9 bits (2145), Expect = 4.6e-237
Identity = 405/421 (96.20%), Postives = 412/421 (97.86%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNI-LVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNI LVQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

[Close]

BLAST of Chy7G129710 vs. ExPASy TrEMBL
Match: A0A6J1FMG7 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC111446741 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 3.9e-220
Identity = 378/425 (88.94%), Postives = 399/425 (93.88%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVL+VASSS+DSGIGCWDLHTG+EQLRYKSCASP HGLVCVG +FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSWFKPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLL+SGSEDGC+RVWSL+ VFDDGWQRE+KHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           +GYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAK PSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNIL-VQQQPLPKSQ--STSQGSLRKHRPLLPPALAKFENSKDEDEYT 447
           +IRV +HSKGPVNN+L V+QQ LP SQ   TSQGSLRKHR LLPPALAKF NSKD+DE T
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 448 GVIIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHW 507
           GVII  SGPP ES GFS +SSHVMD+QITELQQQGSAATGMELERLK DYGKS QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQW 420

Query: 508 RKILD 510
           RK+ D
Sbjct: 421 RKLYD 425

[Close]

BLAST of Chy7G129710 vs. ExPASy TrEMBL
Match: A0A6J1IYT8 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 PE=4 SV=1)

HSP 1 Score: 766.5 bits (1978), Expect = 1.1e-217
Identity = 375/425 (88.24%), Postives = 395/425 (92.94%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVL+VASSS+DSGIGCWDLHTG+EQL YKSCASP HGLVCVG +FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLCYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSWFKPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCL FSEDDSLL+SGSEDGC+RVWSL+ VFDDGWQRE+KHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLEFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           +GYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAK PSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNIL-VQQQPLPKSQ--STSQGSLRKHRPLLPPALAKFENSKDEDEYT 447
           +IRV +HSKGPVNN+L VQ Q LP SQ   TSQGSLRKHR LLPPALAKF NSKD+DE T
Sbjct: 301 IIRVLKHSKGPVNNLLIVQHQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 448 GVIIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHW 507
           GVII  SGPP ES GFS +SSHVMD QITELQQQGSAATGMELERLK +YGKS QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDHQITELQQQGSAATGMELERLKREYGKSMQMQQQW 420

Query: 508 RKILD 510
           RK+ D
Sbjct: 421 RKLYD 425

[Close]

BLAST of Chy7G129710 vs. NCBI nr
Match: XP_011654116.2 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus])

HSP 1 Score: 966 bits (2496), Expect = 0.0
Identity = 472/482 (97.93%), Postives = 474/482 (98.34%), Query Frame = 0


Query: 29  IEVGSFGNSAHPIQLLPAAVSFGAKFRCGCRAVFHPSHRHKNIQTKLKTETLFSSSQLTM 88
           + VGSFGNS HPIQLLPAAVSFGAKFRCGCRAVFHPSHRHKNIQTKLKTETL SSSQLTM
Sbjct: 4   VHVGSFGNSPHPIQLLPAAVSFGAKFRCGCRAVFHPSHRHKNIQTKLKTETLLSSSQLTM 63

Query: 89  VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSV 148
           VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVG KFLACSQLRDPAATAGSV
Sbjct: 64  VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGSV 123

Query: 149 LYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYR 208
           LYWSW KPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHYR
Sbjct: 124 LYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYR 183

Query: 209 AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 268
           AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV
Sbjct: 184 AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 243

Query: 269 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 328
           GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY
Sbjct: 244 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 303

Query: 329 TAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV 388
           TAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV
Sbjct: 304 TAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV 363

Query: 389 IRVFRHSKGPVNNIL-VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVI 448
           IRVFRHSKGPVNNIL VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVI
Sbjct: 364 IRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVI 423

Query: 449 IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRKI 508
           IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK+
Sbjct: 424 IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRKM 483

[Close]

BLAST of Chy7G129710 vs. NCBI nr
Match: KGN55205.1 (hypothetical protein Csa_012375 [Cucumis sativus])

HSP 1 Score: 852 bits (2202), Expect = 1.50e-305
Identity = 417/423 (98.58%), Postives = 418/423 (98.82%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNIL-VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNIL VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 508 ILD 509
           + D
Sbjct: 421 MYD 423

[Close]

BLAST of Chy7G129710 vs. NCBI nr
Match: XP_008452567.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo])

HSP 1 Score: 831 bits (2146), Expect = 4.86e-297
Identity = 406/423 (95.98%), Postives = 413/423 (97.64%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNIL-VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNIL VQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 508 ILD 509
           + D
Sbjct: 421 MYD 423

[Close]

BLAST of Chy7G129710 vs. NCBI nr
Match: KAA0064393.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo var. makuwa] >TYK20193.1 protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo var. makuwa])

HSP 1 Score: 829 bits (2141), Expect = 4.24e-296
Identity = 405/421 (96.20%), Postives = 412/421 (97.86%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNIL-VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNIL VQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

[Close]

BLAST of Chy7G129710 vs. NCBI nr
Match: XP_038898957.1 (protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida])

HSP 1 Score: 787 bits (2033), Expect = 7.09e-280
Identity = 386/423 (91.25%), Postives = 400/423 (94.56%), Query Frame = 0


Query: 88  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 147
           MVL+VASSSIDSGIGCWDLHTG+EQLRYKSCASP HGLVCVG +FLACSQLRDPAATAGS
Sbjct: 1   MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATAGS 60

Query: 148 VLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHY 207
           VLYWSW KPQVEVKSFPAEPIMALASN EGTYIVGGG SGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNDEGTYIVGGGLSGDIYLWEVLSGRLLKKWHAHY 120

Query: 208 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 267
           RAVTCLVFSEDDSLL+SGSEDGCIRVW+L+TVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWALLTVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 268 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 327
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIID IALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDVIALDPGEHVFYGGGRDGKI 240

Query: 328 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 387
           YTAALNAKCPS+ DYGLHILGS+SNQSKSVT+LAYCSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSTGDYGLHILGSLSNQSKSVTALAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 388 VIRVFRHSKGPVNNIL-VQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 447
           VIRVFRHSKGPVNNIL V+QQ LPKSQSTSQG LRKHR LLPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVRQQVLPKSQSTSQGFLRKHRSLLPPALAKFENSKDEDEDTGV 360

Query: 448 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 507
           II P+G PKES GF  LSSHVMD+QITELQQQGSAA GMELERLK+D GKS QMLQHWRK
Sbjct: 361 IIGPTGLPKESMGFPALSSHVMDNQITELQQQGSAANGMELERLKYDCGKSMQMLQHWRK 420

Query: 508 ILD 509
           + D
Sbjct: 421 MYD 423

[Close]

BLAST of Chy7G129710 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 498.4 bits (1282), Expect = 1.0e-140
Identity = 247/423 (58.39%), Postives = 313/423 (74.00%), Query Frame = 0


Query: 89  VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSV 148
           + ++ASSSID GIG WDL TG+EQL++K CASP HGL  VG KFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 149 LYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYR 208
            YWSW KPQ EVKS+P EPI ALA+N+EGTY+VGGG SGDIYLWEV +G+LL KWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 209 AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 268
           +VTCLVFS DDSLLVSGS+DG IRVWSLI +FDD  +++   LYEH+F  H + VTDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 269 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 328
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG  VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 329 TAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV 388
             A+NA    +S+YG  +LGS+S + K++T LAYC+ GNLLISGSEDG + VWD ++   
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 389 IRVFRHS----KGPVNNILVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYT 448
           +R   H+    KGPVNNI + ++ +  + + +Q S +    L+PP L K+E    ED   
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPV-EDTMD 362

Query: 449 GVI-IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQH 507
           G++ +DP          SFLS+ ++D+Q+ ELQQQGSAAT ME+ERLK +Y +S QM + 
Sbjct: 363 GIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMNEQ 419

[Close]

BLAST of Chy7G129710 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 2.1e-45
Identity = 120/227 (52.86%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 551 MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLFI 610
           M+N D+       + MMMQQMEK+PE +++ +P           H    L  S++ P F 
Sbjct: 1   MDNSDIL------MNMMMQQMEKLPEHFSNSNP-------NPNPHNIMMLSESNTHPFFF 60

Query: 611 NNNSNNSNSNNNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFR 670
            N +++    +   P++ P  +    P  SSS     G C   +     ++AAMREMIFR
Sbjct: 61  -NPTHSHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSDNA-----NMAAMREMIFR 120

Query: 671 IAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 730
           IAVMQPIHIDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 121 IAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180

Query: 731 SMLDEAIHYVKFLKTQVQSLERAAGNRPITGGGAPSSVGFPLEMSTG 778
           SMLDEAIHYVKFLK QVQSLE  A    + GGG  +  G  L  + G
Sbjct: 181 SMLDEAIHYVKFLKKQVQSLEEHA---VVNGGGMTAVAGGALAGTVG 205

[Close]

BLAST of Chy7G129710 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-44
Identity = 119/203 (58.62%), Postives = 139/203 (68.47%), Query Frame = 0


Query: 566 MMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLFINNNSNNSNSNNNNPP 625
           MMM QMEK+PEF N    P+S F S   DH      +++ P LF + +  + +S  N P 
Sbjct: 8   MMMHQMEKLPEFCN----PNSSFFS--PDH------NNTYPFLFNSTHYQSDHSMTNEPG 67

Query: 626 YNF-----PQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHID 685
           + +        S++  P T+ S         + +     ++AAMREMIFRIAVMQPIHID
Sbjct: 68  FRYGSGLLTNPSSIS-PNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHID 127

Query: 686 PEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 745
           PEAVKPPKRRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV
Sbjct: 128 PEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 187

Query: 746 KFLKTQVQSLERAAGNRPITGGG 764
           KFLK QVQSLE  A    +TGGG
Sbjct: 188 KFLKKQVQSLEEQA---VVTGGG 194

[Close]

BLAST of Chy7G129710 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-32
Identity = 95/183 (51.91%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 605 SPPLFIN-------NNSNNSNSN------NNNPP-----------YNFPQQSTVPFPGTS 664
           +P LF N       N+SNN+N N      +NN P           + F   S+  FP  S
Sbjct: 7   NPSLFQNYTWNNIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLS 66

Query: 665 SSRWRN---SGSCETESLQKQ--RSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKIS 724
           SS       SG  E +  +++    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS
Sbjct: 67  SSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRIS 126

Query: 725 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAG 759
            DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L    G
Sbjct: 127 DDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTG 186

[Close]

BLAST of Chy7G129710 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 5.7e-30
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 653 ESLQKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 712
           E  +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERISE
Sbjct: 77  EDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISE 136

Query: 713 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAGNRPITGGGAPSSVGFPL 772
           +IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+      P +  GAP       
Sbjct: 137 KIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ------PHSQIGAP------- 196

Query: 773 EMSTGSYIPNHHQSQP 789
            M+  SY+  +H SQP
Sbjct: 197 -MANPSYLCYYHNSQP 198

The following BLAST results are available for this feature:

BLAST of Chy7G129710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	1.5e-139	58.39	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
Q9SND4	3.0e-44	52.86	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	2.6e-43	58.62	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9BV38	4.4e-43	32.51	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]
Q3SZD4	1.3e-42	31.96	WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1	[more]

BLAST of Chy7G129710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZT0	3.9e-244	98.58	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A1S3BU36	1.2e-237	95.98	protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4...	[more]
A0A5D3D9F7	4.6e-237	96.20	Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1FMG7	3.9e-220	88.94	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC11144674...	[more]
A0A6J1IYT8	1.1e-217	88.24	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 ...	[more]

BLAST of Chy7G129710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654116.2	0.0	97.93	protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus]	[more]
KGN55205.1	1.50e-305	98.58	hypothetical protein Csa_012375 [Cucumis sativus]	[more]
XP_008452567.1	4.86e-297	95.98	PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo]	[more]
KAA0064393.1	4.24e-296	96.20	protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo var. makuwa] >TYK20193.1 prote...	[more]
XP_038898957.1	7.09e-280	91.25	protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida]	[more]

BLAST of Chy7G129710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	1.0e-140	58.39	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G50330.1	2.1e-45	52.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	1.8e-44	58.62	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	1.2e-32	51.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	5.7e-30	55.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 513..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 582..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 755..788
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 89..508
None	No IPR available	PANTHER	PTHR18763:SF0	WD REPEAT-CONTAINING PROTEIN 18	coord: 89..508
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 350..385 score: 12.209223
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 203..236 score: 11.681953
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 695..751 e-value: 2.50827E-26 score: 100.159
None	No IPR available	CDD	cd00200	WD40	coord: 91..382 e-value: 2.59716E-38 score: 142.474
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 277..291 score: 36.27 coord: 222..236 score: 41.87 coord: 369..383 score: 40.4
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 196..235 e-value: 5.9E-10 score: 49.1 coord: 156..193 e-value: 1.0 score: 17.0 coord: 249..290 e-value: 0.0046 score: 26.2 coord: 343..382 e-value: 6.2E-7 score: 39.0 coord: 293..331 e-value: 350.0 score: 1.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 198..235 e-value: 1.0E-6 score: 29.3 coord: 254..290 e-value: 0.0061 score: 17.4 coord: 349..382 e-value: 3.9E-6 score: 27.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 256..299 score: 9.606159
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 203..236 score: 14.117617
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 350..391 score: 16.055872
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 700..749 e-value: 1.4E-13 score: 61.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 704..743 e-value: 7.9E-6 score: 25.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 694..743 score: 15.217952
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 302..408 e-value: 3.2E-15 score: 58.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 65..301 e-value: 1.2E-32 score: 114.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 697..757 e-value: 1.5E-11 score: 46.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 699..752
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 369..383
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 92..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G129710.1	Chy7G129710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005656	nuclear pre-replicative complex
cellular_component	GO:0097344	Rix1 complex
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0005515	protein binding