Chy7G128580 (gene) Cucumber (hystrix) v1

Overview
NameChy7G128580
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
LocationchrH07: 246881 .. 252503 (-)
RNA-Seq ExpressionChy7G128580
SyntenyChy7G128580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAGTTGACTTGTTAATTAAGGAAGAAACTCTTATCTTGATCATAGAAGTTAGGTATATATAGTTTGTGTATGCTAATTTGTTACAAAGGTTTATCGAATTCTCAACCCCTACTATACTAGGGGTCGTGTTGAGACAGGCGTGACAGTGAGAACGAGATGAGTATTTGAGGTAGAGCCCCAATGTCTCGATGTATAAAATTAGAACAAGAATGGAAGATTAAGGAAAATGGAGAAAGGGGTGTCACATGTGGGGAAGGGGCATTCACCTAACATGTTAAAATGTGGGGAAAAAAGTGAATGGTGGTCGCTTTTGAAGGAGCCTTTCAATGCTTCATTGCCTTGCCGGCTATGAATTGGTTGATTTGATTGATCTATGTATTACATCTTTTCTGAATTCCTCAATTCTTTTCTTTTTTCTTTTTTTTTTTCTTAAAAAAAAAAAAAAACACTTCCAAAATTTAAATAATAATTAATAATTCAATTCCTAAATTTGATATGTAACATGGTCTTTTACTTTCAAATATATAATATTGACAAATCAAAATTTTTCTGTCAATTTTTGGTATGCAATTATCATCTAGGGTTTTTAGATTATAATAGTGTGTGGAAGTGAATATGTGTTCAAGATGTAGACTATCATAGTTCGTGTTTAATAAAATTTGTGTTTGGCATCTCTAGAGGGATAGTCGGCAAGCATAGGTCACCACCACAGATGACACAAAAATGATTAACAACTTAGATCTGTAAATTTTGTATTTTTAATTTTATAAATGATGGTAGGCTATTATTCAAAAGCAGTTGAAGAAGAAAAGTTGATGAAGGTTGTTTTATTTTAATGAGCTTGTGATATTAAAACAATTTAGGAATGAGTCTTTTTATGTTCACATTCTCTTTTTCACGTTTAAAATTAGATTAGAGCATATTTGGATTCAGTAGAGAAGAAAAATGTTTGTTTGTGATGTGATACCAACGCACCATGCAATTGCGTCCATTAACGTGTGGATTATATTTCCCATTGCCATTCAACCTCTCATCCCAATCCCATGCCTTTATTTCTTAAAAATATGCACTTCAGAGTTAAAATCTTCAACTTCCATGATTTTACTTTTTTTTTTTTTTAAAAAAATCATTATCTAAGTTTTCACATTTTGTATTTTGTTCTATTTTAGTGTCTATATACTTTTAATAAAAAATTTAATTAGTTCTTACCTCATGTTTTTTCTTGCATGAATATTATCGTATTTGATTGAGTGAAGTTTGTTCCATTATTTTGGGCTTGAATTTTGTAGGTAAAAGAAATGGGCCTAACCAAATTTAAAAAAACATGATTGTAGCAATAGCATCGTCTTAGAAAATAGAGATGCAAATGAGTAGATGTGTTGTTAACCACTTAATTATATGATAATGTAGGCTTAGTTTAATAAAGTATAAAAATACTCTACTACCTCACCAATAATAATCCTGAATAAATCCAAAGGTTTTGCAAGGTGTAGGTGAGAATTATTATTGGAAAGATGAGGGGAAAAAAAGTCGATATTGTGGATCCTAAGGACACTTATTTTCAAAGTTACAATGATTTAAGGGTGAGGAATGATATATATGTATGTATAGATGGGATTATTATTATTCATGAATTCATATAGACAAATTAAAAGTATGGAAATCTTTTGGGATGATTGACAAAATGTGATGTGTAAATGTATCATATTGATGTGCACAATGGAATTATTGTCCTTAAAAACTTAGACAAACTTTGGCTCCTCGAGATTCTAATTCTATCCTAAAAACAAAAAACCTCTAACATAATTCAATGGTTAAAAGGTTGGTTTGGTAATAAATTTGATTTCGTTTCATAAAACTATTTCATTTTTTAAAAATTAACTTTATTTTCTCTCAATTTCTTATTATCGTTTTCATTTTTTATAAGTAAAAGAACTTAATTCTAAACTAAATTCCAAATTCCAAAAATAGGTTATTACAAACACCTTTTTTTTTTTATATAAAAAAATGTTATTACTTTCAAATTTTAGCATGATTCTTAAAATATTAGGCAAAAGTAGAAATTTAGAGGTAGAAAGGAGATTTATAGCTTAATTTTTTTTATATAGAAAAAGATTAACTAATTTCCAAATAATTAACCATCATGGATTAGTTGAGTACTGGTAGTGGGAATATAAGAAAAATCTAAAGGTTTAAAAGTCCTAAGTTAAATTCATGGTGATCACCTATCTAAGATTTAATAACTTACCATTTTTCTTTACAGTTAGATGTTGTAAGGCTACAAATTGTTTAATGAGATTAATCGAGGTATATAAACAATACTTTTAAAAAAAATTCCCTTTTTCTATGCTAAATTTTAGTATACAAGAGAAAGGAAGCCTTTTAGAAACCCTAGAAAAAAAGAGAAAAGAAAAACAGAAGCTTTAATTTCTTATATACATCAACATATATAACTCATTAACCTCAATTCTCTCATCTTAATTCTAATAAATAAAAAATGTAATTAAAAAAAAATCTCCTAATTTCAATTCTAACTAAAAAAAAAAAAAAAGATAATTGAATGATTATTGAGGAAAAATAATATTTAAGGATAACAACAAAAGCAAACACTTAAAAAGAAATCATTAATTAACTATTCCAAAAGCATTATTAGCAGTGCTAATTAAGATTATGGAAGATATTGGCCATAGTGCCATTAAATTAAAACAATTAGCAAAATAAAAAAGGAGGAAAAAAAATTTAGAATCCAATAATAAAGTGCCACGTGTCTGCATAAAGATGCTTAGTCGGCCATTAATTAACTATAATTTTATCAATTTAATTAATACTTTATGTTTTGATCATTTGGTCTATTGTTGTATCATTGCAGTCTAAACAAAAAGAAGTTTATATGTTCAACCAACTTATCATATTGATTCAAAAATATTGTATTAATATATCAAGATGTGTATTAATTTATTTGTTAAATTGAAAAAAGTTTTTATTATTAAATTCTATAAGAAATTATTAATTTATTTTTTATATTATTTTGTAGTCATGATCTTCTCACGTGCGGTTATTACATATCCTTTTTTTATAAAAAAAATAATAATAAATTGAGCGTATGATATATGAAGAGAAGAGTTTCACTTTTCAAATTAAAAGTAAAATTCACAATGACCTATAAATTGTGAATGAAGTTTTGCTAGACAAAGATGAGATTTGCTAGGTACTTCAAAATCATTCTTGTTCATATATTTGCGTTTATTAATCATTATACGCATATATTTAAAATGAGTGCGAGGGAATTCTTTTTTAAAATTTATATTTCATTATTTTCTCTTTTTTTTTTTTACTAACTTTATTTTGGTTTCTTTCCGAAGCTCCACATGTTAAGTTTTGATTGATAGATAATTTTGTCGAAAATGAAAAAAGAAATTAGCTTGTAATTAACCTAATAATTACATTAGATTATAATTAATTAGCTTAGACGAAAGTGATGATTGAATTTGGACGATAGAAAATCTAATTATTATAAGGCGAAATCATGAAAAGAAATGGGTTATTGGGTTAATTAATATAGTACAATTAAAAGGTGTGTGGGAGAGAGAGAGAGGGAAAAAAGAATTAATAAAGCAATATGAGGTTGGACCATATGATGTCTCCTCCATGATACGATCTAATTCTTTCATTTTTCTTGTGTTTCCCCCCTTCTATTACTCCCCCACTCAGCAAAATTCTTGTTCCCTTCTCATCTCTTCACTCTGCTATCTCCAGAACATTTACCCAATTGGTTTTGTTCGTAAAATCTAATCTTGAACAGATCGATCATATGTCGAGTAGTAAAGGCAAGGATGTTCATCAAGGATCATCATCAAATTCCTCTTCTTCTTCCTCAGCTCTAATCGTTGTTGTTGACGATCACAATCATCATCAACAACAACAACAGTTTGAACGAGGAGATGAACAAGCAGCACCAACATCGTCAGTAGTAGGCGCACCAGTGATTAGTCGGTACGAGTCACAAAAGAGGAGAGATTGGTACACTTTTGGGCAATATTTGAGGAACCAAAGGCCACCATTGGCTATATCACAATGCAATTCAAGTCATGTATTGGAATTCCTTAGATATCTAGACCAATTTGGGAAGACAAAAGTGCATTTAAATGGGTGTGGTTTCTTTGGAGAACCTGAGCCAGCAGGGCCTTGTACTTGCCCTCTTAGACAAGCTTGGGGCAGCCTTGATGCTCTTATTGGTCGCCTTAGAGCTGCTTATGAAGAAAATGGAGGCTCATCAGACACTAATCCATTTGCTAGTGGTGCTATTAGGGTTTATTTAAGGGAAGTTAGGGACTCTCAATCCAAGGCCAGAGGAATCCCATATAAGAAGAAGAAGAAAAAGAAGATTCCAATTAACACTCATCAACAAGGTAAATATATATCCTAATTCAAATATTAATATTAATATATATATATCCTATTTAATTAGTATTATGATGATGAGGTTAGTTAAACACTAATCCAATAAATTTTCTAAGTACTGGAAATTCAAACCTTCAATTTTTTAGAGAAACAACTAAATGATTAGTGTATATATCAAATGTTTTGTTTGTTTCAAAACATGTTTGAGATTGATTATGAAGTGGTGATCAAAATTATTTATTCATGTTGATCAAAATACATCATTTAAGCATTCAAAATCAAAATAATATATGGTTTTATATTCTCAAAATTATGAAGAGATCAACATATAACAAAGTGAATGAACATAATTAATCTTCTTTTGTTTTTATGTTAAGAGAAAGTTCAAGGAATAATGGAGAATATATATATATAATATAATCATCGTAGAGTTTCACTGTCAAAATAAACTTAGCTCAACGATAGTTAACATGAATTTAGGTTTGCAATTTCTCATCCCCGATAGTTCTTGAAAACAAAAAGCTTCAAAGCCCTAAATTTCATAATACATGAGCTAGGGTTTATGGTGGGTTTCTTTAGAATATATATGATTAGAGGTATAGAACAATTATTAGTATCTTTAACTTTTTCCTTAGACACCTTTTTCTTTTTCAAGAAATATAAAATTATCATTTGTAATATTCCAAATAAATCAATAACTATTTCCATCCCTTTTTTCTTTCATTTGTCTCTTAGTCTTTCTATTTTATTGTATCTCATAACCCAATTTTGTTTTAATATTTAATAACACAAAAATACCGCACACTAAACTATACATTTAAATCATATATTTTGATTTTTTTCAATTTCGTCTCTATATTTTTAAAAGTTTTAACATCATCGTCCTTAACCTTTCAATTATATTTATCAAATGTTTATAGTAATTAATTTATGCATTATATACATGGTTGCAAATTAACATAAATGAGGATGAAATTAATGAAAAAAGAAAACGAATCAAAACTAGATTAAGGGGTATAATTGATGAACTAAGATCATGTATGAACTTTGTTGGTTGCTTAATTATTACAAATATTTAAACTTGTATTTCAGGGGCCTAAGAGAAGGAGTAGTGAGCAGTTGATGTGTTTTTGGAGGGTCTCTCAGTTGCAATATGGATATTTGATCTCAAAATTAAACAACAACACATGCATGCAAAAAGCTCTTTTGAGTTAA

mRNA sequence

ATGGGTAAAGTTGACTTGTTAATTAAGGAAGAAACTCTTATCTTGATCATAGAAGTTAGTCATGATCTTCTCACGTGCGGCGCACCAGTGATTAGTCGGTACGAGTCACAAAAGAGGAGAGATTGGTACACTTTTGGGCAATATTTGAGGAACCAAAGGCCACCATTGGCTATATCACAATGCAATTCAAGTCATGTATTGGAATTCCTTAGATATCTAGACCAATTTGGGAAGACAAAAGTGCATTTAAATGGGTGTGGTTTCTTTGGAGAACCTGAGCCAGCAGGGCCTTGTACTTGCCCTCTTAGACAAGCTTGGGGCAGCCTTGATGCTCTTATTGGTCGCCTTAGAGCTGCTTATGAAGAAAATGGAGGCTCATCAGACACTAATCCATTTGCTAGTGGTGCTATTAGGGGGCCTAAGAGAAGGAGTAGTGAGCAGTTGATGTGTTTTTGGAGGGTCTCTCAGTTGCAATATGGATATTTGATCTCAAAATTAAACAACAACACATGCATGCAAAAAGCTCTTTTGAGTTAA

Coding sequence (CDS)

ATGGGTAAAGTTGACTTGTTAATTAAGGAAGAAACTCTTATCTTGATCATAGAAGTTAGTCATGATCTTCTCACGTGCGGCGCACCAGTGATTAGTCGGTACGAGTCACAAAAGAGGAGAGATTGGTACACTTTTGGGCAATATTTGAGGAACCAAAGGCCACCATTGGCTATATCACAATGCAATTCAAGTCATGTATTGGAATTCCTTAGATATCTAGACCAATTTGGGAAGACAAAAGTGCATTTAAATGGGTGTGGTTTCTTTGGAGAACCTGAGCCAGCAGGGCCTTGTACTTGCCCTCTTAGACAAGCTTGGGGCAGCCTTGATGCTCTTATTGGTCGCCTTAGAGCTGCTTATGAAGAAAATGGAGGCTCATCAGACACTAATCCATTTGCTAGTGGTGCTATTAGGGGGCCTAAGAGAAGGAGTAGTGAGCAGTTGATGTGTTTTTGGAGGGTCTCTCAGTTGCAATATGGATATTTGATCTCAAAATTAAACAACAACACATGCATGCAAAAAGCTCTTTTGAGTTAA

Protein sequence

MGKVDLLIKEETLILIIEVSHDLLTCGAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIRGPKRRSSEQLMCFWRVSQLQYGYLISKLNNNTCMQKALLS*
Homology
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BLAST of Chy7G128580 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-49
Identity = 87/107 (81.31%), Postives = 97/107 (90.65%), Query Frame = 0 

Query: 32  SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGFFGE 91
           SRYESQKRRDW TFGQYL+NQRPP+ +S C+ +HVL+FLRYLDQFGKTKVH+ GC F+G+
Sbjct: 24  SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQ 83

Query: 92  PEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           PEP  PCTCPLRQAWGSLDALIGRLRAAYEENGG  +TNPFASGAIR
Sbjct: 84  PEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIR 130

[Close]
BLAST of Chy7G128580 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.3e-47
Identity = 83/112 (74.11%), Postives = 95/112 (84.82%), Query Frame = 0 

Query: 27  GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC 86
           G   +SRYE+QKRRDW TFGQYLRN RPPL++S+C+ +HVLEFLRYLDQFGKTKVH + C
Sbjct: 42  GTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLC 101

Query: 87  GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
            FFG P P  PC CPLRQAWGSLDALIGRLRAA+EENGGS +TNPF + A+R
Sbjct: 102 PFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVR 153

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BLAST of Chy7G128580 vs. ExPASy Swiss-Prot
Match: Q9ZVA0 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LSH7 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.3e-47
Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0 

Query: 29  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 88
           P +SRYESQKRRDW TF QYLRNQ+PP+ ISQC S+H+L+FL+YLDQFGKTKVH++GC F
Sbjct: 36  PALSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVF 95

Query: 89  FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           FG+ EPAG C CPL+QAWGSLDALIGRLRAA+EENGG  + NPFA G IR
Sbjct: 96  FGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIR 145

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BLAST of Chy7G128580 vs. ExPASy Swiss-Prot
Match: A2YG32 (Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 82/111 (73.87%), Postives = 93/111 (83.78%), Query Frame = 0 

Query: 28  APVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCG 87
           AP  SRYESQKRRDW+TFGQYLRN RPPL +S+C+ +HVLEFLRYLDQFGKTKVH  GC 
Sbjct: 17  APRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCP 76

Query: 88  FFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           FFG P P  PC CPLRQAWGSLDAL+GRLRAA+EE+GG  + NPF + A+R
Sbjct: 77  FFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVR 127

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BLAST of Chy7G128580 vs. ExPASy Swiss-Prot
Match: Q652I1 (Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 82/111 (73.87%), Postives = 93/111 (83.78%), Query Frame = 0 

Query: 28  APVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCG 87
           AP  SRYESQKRRDW+TFGQYLRN RPPL +S+C+ +HVLEFLRYLDQFGKTKVH  GC 
Sbjct: 17  APRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCP 76

Query: 88  FFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           FFG P P  PC CPLRQAWGSLDAL+GRLRAA+EE+GG  + NPF + A+R
Sbjct: 77  FFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVR 127

[Close]
BLAST of Chy7G128580 vs. ExPASy TrEMBL
Match: A0A0A0L028 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627230 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.1e-61
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 27  GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC 86
           GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC
Sbjct: 55  GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC 114

Query: 87  GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 115 GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 166

[Close]
BLAST of Chy7G128580 vs. ExPASy TrEMBL
Match: A0A5D3DWV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001030 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 29  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 88
           PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF
Sbjct: 55  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 114

Query: 89  FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 115 FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 164

[Close]
BLAST of Chy7G128580 vs. ExPASy TrEMBL
Match: A0A1S3CJY2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103501807 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 29  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 88
           PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF
Sbjct: 55  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 114

Query: 89  FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 115 FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 164

[Close]
BLAST of Chy7G128580 vs. ExPASy TrEMBL
Match: A0A6J1FB04 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111443674 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57
Identity = 105/127 (82.68%), Postives = 113/127 (88.98%), Query Frame = 0 

Query: 12  TLILIIEVSHDLLTCGAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLR 71
           +L+ +I   +         +SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVL+FLR
Sbjct: 54  SLVAVINDRNQPAATAVAPVSRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLR 113

Query: 72  YLDQFGKTKVHLNGCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNP 131
           YLDQFGKTKVHLNGCGFFG+PEP GPCTCPL+QAWGSLDALIGRLRAAYEENGGSSDTNP
Sbjct: 114 YLDQFGKTKVHLNGCGFFGQPEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGSSDTNP 173

Query: 132 FASGAIR 139
           FASGAIR
Sbjct: 174 FASGAIR 180

[Close]
BLAST of Chy7G128580 vs. ExPASy TrEMBL
Match: A0A6J1IH94 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111476929 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56
Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 31  ISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGFFG 90
           +SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVL+FLRYLDQFGKTKVHLNGCGFFG
Sbjct: 79  VSRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 138

Query: 91  EPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           +PEP GPCTCPLRQAWGSLDALIGRLRAAYEENGG+SDTNPFASGAIR
Sbjct: 139 QPEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGTSDTNPFASGAIR 186

[Close]
BLAST of Chy7G128580 vs. NCBI nr
Match: XP_004146094.2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN55073.1 hypothetical protein Csa_012765 [Cucumis sativus])

HSP 1 Score: 243 bits (620), Expect = 8.29e-79
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 27  GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC 86
           GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC
Sbjct: 55  GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC 114

Query: 87  GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 138
           GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 115 GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 166

[Close]
BLAST of Chy7G128580 vs. NCBI nr
Match: XP_008463732.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo])

HSP 1 Score: 239 bits (609), Expect = 3.65e-77
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 29  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 88
           PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF
Sbjct: 55  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 114

Query: 89  FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 138
           FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 115 FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 164

[Close]
BLAST of Chy7G128580 vs. NCBI nr
Match: KAA0066771.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa] >TYK27918.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (609), Expect = 6.41e-77
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 29  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 88
           PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF
Sbjct: 55  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 114

Query: 89  FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 138
           FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 115 FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 164

[Close]
BLAST of Chy7G128580 vs. NCBI nr
Match: XP_038896716.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida])

HSP 1 Score: 233 bits (593), Expect = 9.59e-75
Identity = 110/114 (96.49%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 25  TCGAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 84
           T  APV SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN
Sbjct: 48  TTIAPV-SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 107

Query: 85  GCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 138
           GCGFFGEPEP GPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 108 GCGFFGEPEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 160

[Close]
BLAST of Chy7G128580 vs. NCBI nr
Match: KAG7024787.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (585), Expect = 9.61e-74
Identity = 107/114 (93.86%), Postives = 109/114 (95.61%), Query Frame = 0 

Query: 25  TCGAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 84
           T   PV SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVL+FLRYLDQFGKTKVHLN
Sbjct: 33  TAVVPV-SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLRYLDQFGKTKVHLN 92

Query: 85  GCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 138
           GCGFFG+PEP GPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR
Sbjct: 93  GCGFFGQPEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 145

[Close]
BLAST of Chy7G128580 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-50
Identity = 87/107 (81.31%), Postives = 97/107 (90.65%), Query Frame = 0 

Query: 32  SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGFFGE 91
           SRYESQKRRDW TFGQYL+NQRPP+ +S C+ +HVL+FLRYLDQFGKTKVH+ GC F+G+
Sbjct: 24  SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQ 83

Query: 92  PEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           PEP  PCTCPLRQAWGSLDALIGRLRAAYEENGG  +TNPFASGAIR
Sbjct: 84  PEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIR 130

[Close]
BLAST of Chy7G128580 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-50
Identity = 87/107 (81.31%), Postives = 97/107 (90.65%), Query Frame = 0 

Query: 32  SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGFFGE 91
           SRYESQKRRDW TFGQYL+NQRPP+ +S C+ +HVL+FLRYLDQFGKTKVH+ GC F+G+
Sbjct: 24  SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQ 83

Query: 92  PEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           PEP  PCTCPLRQAWGSLDALIGRLRAAYEENGG  +TNPFASGAIR
Sbjct: 84  PEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIR 130

[Close]
BLAST of Chy7G128580 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-48
Identity = 83/112 (74.11%), Postives = 95/112 (84.82%), Query Frame = 0 

Query: 27  GAPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGC 86
           G   +SRYE+QKRRDW TFGQYLRN RPPL++S+C+ +HVLEFLRYLDQFGKTKVH + C
Sbjct: 42  GTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLC 101

Query: 87  GFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
            FFG P P  PC CPLRQAWGSLDALIGRLRAA+EENGGS +TNPF + A+R
Sbjct: 102 PFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVR 153

[Close]
BLAST of Chy7G128580 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 189.1 bits (479), Expect = 3.0e-48
Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0 

Query: 29  PVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGF 88
           P +SRYESQKRRDW TF QYLRNQ+PP+ ISQC S+H+L+FL+YLDQFGKTKVH++GC F
Sbjct: 36  PALSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVF 95

Query: 89  FGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           FG+ EPAG C CPL+QAWGSLDALIGRLRAA+EENGG  + NPFA G IR
Sbjct: 96  FGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIR 145

[Close]
BLAST of Chy7G128580 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-47
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 32  SRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLNGCGFFGE 91
           SRYE+QKRRDW TFGQYLRN RPPL++S+C+ +HVLEFLRYLDQFGKTKVH N C F+G 
Sbjct: 53  SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGH 112

Query: 92  PEPAGPCTCPLRQAWGSLDALIGRLRAAYEENGGSSDTNPFASGAIR 139
           P P  PC CPLRQAWGSLDALIGRLRAA+EENGG  +TNPF + A+R
Sbjct: 113 PNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVR 159

The following BLAST results are available for this feature:
BLAST of Chy7G128580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S7R31.6e-4981.31Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
Q9LW683.3e-4774.11Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS... [more]
Q9ZVA04.3e-4775.45Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LS... [more]
A2YG321.2e-4673.87Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1[more]
Q652I11.2e-4673.87Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1[more]
BLAST of Chy7G128580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0284.1e-61100.00ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627230 PE=3 S... [more]
A0A5D3DWV81.0e-59100.00Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3CJY21.0e-59100.00protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1FB048.1e-5782.68protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1IH941.1e-5695.37protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of Chy7G128580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146094.28.29e-79100.00protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN55073.1 hypoth... [more]
XP_008463732.13.65e-77100.00PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo][more]
KAA0066771.16.41e-77100.00protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa] >TYK... [more]
XP_038896716.19.59e-7596.49protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida][more]
KAG7024787.19.61e-7493.86Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma sub... [more]
BLAST of Chy7G128580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42610.11.1e-5081.31Protein of unknown function (DUF640) [more]
AT2G42610.21.1e-5081.31Protein of unknown function (DUF640) [more]
AT3G23290.22.3e-4874.11Protein of unknown function (DUF640) [more]
AT1G78815.13.0e-4875.45Protein of unknown function (DUF640) [more]
AT2G31160.12.6e-4775.70Protein of unknown function (DUF640) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006936ALOG domainPFAMPF04852DUF640coord: 29..138
e-value: 1.6E-56
score: 189.9
IPR006936ALOG domainPROSITEPS51697ALOGcoord: 33..159
score: 54.720345
NoneNo IPR availablePANTHERPTHR31165:SF9PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6coord: 28..138
IPR040222ALOG familyPANTHERPTHR31165PROTEIN G1-LIKE2coord: 28..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G128580.1Chy7G128580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009299 mRNA transcription
biological_process GO:0009416 response to light stimulus
cellular_component GO:0005634 nucleus