Chy7G128410 (gene) Cucumber (hystrix) v1

Overview
NameChy7G128410
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTransmembrane protein
LocationchrH07: 126346 .. 126632 (-)
RNA-Seq ExpressionChy7G128410
SyntenyChy7G128410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGGAGAAGAGGTTACTGGTCCGGCGGGCCCTAAGATTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATGTAATTTCTTCCATTTTTCTCTTTTTATCTTCTCTCTTCGATTCTATTCATTAATCATTCCATTCGTTTATGTTGTTCAGTCATTGTCAGCTTCGCCATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGCAACAACAGCAGAAGCAGCGTTTGAATCATCAATTATCCGAATCTTCTAATGATGCTGTGCAGAAAGTCGTCGAATGA

mRNA sequence

ATGACCGGAGAAGAGGTTACTGGTCCGGCGGGCCCTAAGATTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATTCATTGTCAGCTTCGCCATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGCAACAACAGCAGAAGCAGCGTTTGAATCATCAATTATCCGAATCTTCTAATGATGCTGTGCAGAAAGTCGTCGAATGA

Coding sequence (CDS)

ATGACCGGAGAAGAGGTTACTGGTCCGGCGGGCCCTAAGATTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATTCATTGTCAGCTTCGCCATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGCAACAACAGCAGAAGCAGCGTTTGAATCATCAATTATCCGAATCTTCTAATGATGCTGTGCAGAAAGTCGTCGAATGA

Protein sequence

MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSNDAVQKVVE*
Homology
[Close]
BLAST of Chy7G128410 vs. ExPASy TrEMBL
Match: A0A0A0L208 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625040 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-28
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. ExPASy TrEMBL
Match: A0A090ITT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTG+EVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSES N
Sbjct: 1  MTGKEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. ExPASy TrEMBL
Match: A0A5D3DXD1 (Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00850 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTGEEVTGPAGPKILRLLYFAGAGFI SFAINKWREIERNSLLQQ QKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 69
          D VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. ExPASy TrEMBL
Match: A0A1S3CKG5 (uncharacterized protein LOC103501828 OS=Cucumis melo OX=3656 GN=LOC103501828 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTGEEVTGPAGPKILRLLYFAGAGFI SFAINKWREIERNSLLQQ QKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 69
          D VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. ExPASy TrEMBL
Match: A0A6J1C1U1 (uncharacterized protein LOC111006563 OS=Momordica charantia OX=3673 GN=LOC111006563 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-21
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          M GEEV+GPAGPK+LR LYFAGAGF+ + A+NKWRE+ER SLLQQ QKQ LNHQ SE+ N
Sbjct: 1  MAGEEVSGPAGPKVLRFLYFAGAGFVFAIAVNKWREMERRSLLQQHQKQMLNHQFSETPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. NCBI nr
Match: XP_011654034.1 (uncharacterized protein LOC105435291 [Cucumis sativus] >XP_031739554.1 uncharacterized protein LOC105435291 [Cucumis sativus] >KGN55049.1 hypothetical protein Csa_012569 [Cucumis sativus])

HSP 1 Score: 131 bits (329), Expect = 3.15e-38
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 68
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. NCBI nr
Match: CED89884.1 (uncharacterized protein [Cucumis sativus])

HSP 1 Score: 129 bits (325), Expect = 1.28e-37
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTG+EVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSES N
Sbjct: 1  MTGKEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 68
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. NCBI nr
Match: XP_008463762.1 (PREDICTED: uncharacterized protein LOC103501828 [Cucumis melo] >KAA0066753.1 transmembrane protein [Cucumis melo var. makuwa] >TYK27900.1 transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 4.31e-36
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTGEEVTGPAGPKILRLLYFAGAGFI SFAINKWREIERNSLLQQ QKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 68
          D VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. NCBI nr
Match: XP_038897241.1 (uncharacterized protein LOC120085366 [Benincasa hispida])

HSP 1 Score: 119 bits (298), Expect = 1.70e-33
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES N
Sbjct: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 68
          D+VQKVVE
Sbjct: 61 DSVQKVVE 68

[Close]
BLAST of Chy7G128410 vs. NCBI nr
Match: XP_023522224.1 (uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 113 bits (283), Expect = 3.30e-31
Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSN 60
          MTGEEV GPAGPK+LRLLYFAGAGF+ + A+NKWREIER SLLQQQQKQRL+HQ +ES N
Sbjct: 1  MTGEEVAGPAGPKVLRLLYFAGAGFVFTIAMNKWREIERKSLLQQQQKQRLDHQFAESPN 60

Query: 61 DAVQKVV 67
          DAVQKVV
Sbjct: 61 DAVQKVV 67

[Close]
BLAST of Chy7G128410 vs. TAIR 10
Match: AT1G16916.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 7.9e-13
Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 0 

Query: 8  GPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESSNDAVQKVV 67
          GP  PK+LR++YF GAGF+ +FAINKWRE+ERNSLL+Q+Q++     +     D+VQK +
Sbjct: 5  GPPAPKMLRMVYFVGAGFLCTFAINKWREMERNSLLKQEQEKNQQGDVGLLPRDSVQKAM 64

Query: 68 E 69
          +
Sbjct: 65 K 65

The following BLAST results are available for this feature:
BLAST of Chy7G128410 vs.
Match NameE-valueIdentityDescription
BLAST of Chy7G128410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2088.8e-2898.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625040 PE=4 SV=1[more]
A0A090ITT62.6e-2797.06Uncharacterized protein OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A5D3DXD13.7e-2694.12Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38... [more]
A0A1S3CKG53.7e-2694.12uncharacterized protein LOC103501828 OS=Cucumis melo OX=3656 GN=LOC103501828 PE=... [more]
A0A6J1C1U13.6e-2176.47uncharacterized protein LOC111006563 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
BLAST of Chy7G128410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654034.13.15e-3898.53uncharacterized protein LOC105435291 [Cucumis sativus] >XP_031739554.1 uncharact... [more]
CED89884.11.28e-3797.06uncharacterized protein [Cucumis sativus][more]
XP_008463762.14.31e-3694.12PREDICTED: uncharacterized protein LOC103501828 [Cucumis melo] >KAA0066753.1 tra... [more]
XP_038897241.11.70e-3386.76uncharacterized protein LOC120085366 [Benincasa hispida][more]
XP_023522224.13.30e-3182.09uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of Chy7G128410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G16916.17.9e-1352.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G128410.1Chy7G128410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane