Chy6G127770 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G127770
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH06: 26540429 .. 26545648 (+)
RNA-Seq Expression	Chy6G127770
Synteny	Chy6G127770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAAGATTCAAGCAAGCAACCACGCTTCCTCGTGGTGGCAATTCGAGCATTCGACCTATGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGTCTCGGGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGACAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGCAGGAGGAGGTAATCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCACACCTCTGGTTTTTGAGCTGTTTTGATTTGTTAGTTACATCTACTAAAAGCTTTCAAGCTTTTGCAAAAATGCTTCCTTTGTACAAGGTTAAATCTTCATGATTTTGATTAATGTCATTTGGATGGCTCTAGCTTCACAATATCACTGTTGAGAATATCTTTTTTTCCATTTAAAAATAAAGTTAGTCTATAGAAAAGAAGTGGAACCATTCAAATTTATGTCTAATCTCTAAATGTTGTGGGGAAAGGAAAATTCATAATTAGCTAAAGTACCCAACTTTAATTTCTAAAGCAAATTATGCTTTGGATTTTAGTGGCTAATATGAATGAAGCCAAGAAAAAAAGAAAAAACCCCTCTAAATTATGCTGCCAGTAAAAGTGGATTACCAACCTCCAAATTTGTTTAAACCCACAAGTTGTTGGGCCTTTGGTAAGAGCCACACATTATGTCATCATCATATAGCATCTCATAGTTGATTTCATTCAATGCATTAAATCAATAGTTGTCGACATCGATATGGTTGGCAAAAAGAAGTTGATAAATACAACAAAGTTTAGATTCAACTCTCAAAGTTTATTATTAATCAACTATATTGCTTGTATGCATCTTAATTAATTTCATAGAAATACAATCATTCGACTTTATTACATTTGTTGTTAGGACAAATGTAGGGTGAGTGCTACTAATTTGATTGAGTTTGGCTAAGTTTATCGGTTTGGTTCTAACCGAATCGAACCAATAAGGAGGTGGGTTAGTTGTTATTTATTGCAATTACTATGGTGACAAAGGGAATATGATAGGAACTTGCTTTCTCTGCCTATACCTGTGGCTGATCATCACAGCCTATGATTGACATGAAAGTGGCTATTCATTCATTTTCCTTTTTTCTTTCTTTCTTTTTCTTTTGGAAATTTGGAATTTAGAATTATATGCTTTTAACCCTACTAATCTTAAATTTAAAAGTGATAAGACTAATAAATTATTTTGCCAAAGCATTGGGTTTAATTGCAAGCTTTATAAGGGAGGGGACAACCCTTTTTCTTTAGACGCATGAGATGGAAAAAAAAGTGAGGATAAAATAGTAGGACAATAATAAGACCACCTAACCCTAAGAGTGACACAAGAAAAGTTATATATATATATACTGGAGGAACAAGTTTGACCTTCACATTACCATTCGAGTAAATTTAATTGAAAGGAAAAAGAACTTACACATTGGTATGATATACTTAACGTATCCACTTCATGCTTAAGTTGAAGAGTGGCGAAAGCTATATTAAGTTTGAGATTAGAATTGAAATTACCTCAACGTTAAAAAGTTACTAGGGTTCGTAAGGTAATTGAATAAGTTTGTTAGCTAAACATAGACGGATCAAAGTTACAAATCCAATGAGTATACTCTAAAATAGTAAAATAATAGATATAATTCCCATAATTTTTCTTTTTACATTTAGTGATGTGGTGGAATATTAATAAATAATGGAAAATGATAAGAAAACCTCAAAAGAGTTCATTTATATCAGAAATACAATTAGGGTAAGTTCACAAAAGAACACAGCTTGTTCATAAAAGACCCACAAGGTTAATTAAAAAGAAAAAAAGGACTAAAAAACTTAGTGAAATTTAAACCTTTTTGCTTCATTTTACCCACAAACATCCAAATCCCAAATTGGTTCCCACATGAGAAAAATTGAGAGTAAATCACAACATTTGATCATTTCTTTTCCCTGCAGACATGTGTCTCATTCCTTTTCCCACCATGTAAAGTGCTCAATCCAATTCAACTTTACACAATTTTACAATTATATATATGTATATGTATATGTTCTCTCCACCATTTGATTTCTTAAAAGCTTCTGTACCCCTCTGTGTGTAGTGTGGACCAATTTATATATGTTGTCATTTCTTTGCAAAATTCTTGTGTATTTTGTCTATGTTGACCCCAAATTGATTGGATGTTCAAATATATTCCTTTATTTTCCCATTGGTCTAACTTTTCATTATTGAGTTTCATTTTGTACTATCCATTAGACAAATTTGTAAGGAAAAAAGTGTACAACTCCAGATGGGTTGTTGCCATTGTTGGAAAAATCTCATACTATATATATATTATTATCACACAAATAAGTAATACAACTTGTGATACGAACATATAAACGTTAAAAACTCCAAACTAGAGGATATATCACGAATGTGAGATTATTACAATCAAATAGAAATGTTCCTTTGACTCTAATTACAAAAGCTTTCTCTCTAATTATTATAAATCACTTGCACAACTAAACTAGTATCACGTGCTTCGAATTGGGATGATTGCAAATTAAAGACATAAGTTCATTTTGAAGTACTTGGAGACTATCACCCTTCTTCAACCTTTTAGATATGAGACGACAATTGTACTTTTAATATTTTGCCAAGAACACTAACAAATTTCACGTTGAGAAGATATTTGAAGAATATAATCCTTAGCTTTTGCTACATTCATTTTCTTCAACAACAATCATAATTATGAACTGAAAGAAGTATAATCGACTCTACCACTAAAGAGTAGACCGTTCGGGATACCACATTTTGAGATTTTTTTCTTTTGTCACATGTCGATAAACCCTTGTTGAAACTTATGGGTGTGCAATAACTTCTACCTACTTGGTTCACCATGAAGTTATTTAGTCGTTGACATAACTTCCACTATACCACACTACATACATCACTATTAGACTCTTCTAAACTTCCATCACCACTCAACTCTTTAAGTATACCATTGCTTGGCCGTCTTTCTCTCAAATGTCTTGTGAAAGCTATATTGTGTATTAGCACGTTCTTGACTAGCGCTTGTCATAAGTCAAAGTTTACCCTTTCATCAAAAAATTTCCATACTAGGACATATTATACTAAAAAAACTTGAAATATCTATTTCACTCCTAAAATTTTGCAAATAATGAACAACTCTCATTATTCACCCTACCAAAGCTCGTTTCATGAATTAATTCCCTTTTGATGTGAAGGCCAAGACAATATTGCAACTACAAAGTAATACTTAGAAATTTAGGAAAAGTACAGACCTCAAAATATGATCACCTCTCATTGTCTACTGCAAGAATAAGTAGAAAAATAACAAATGAATTAAATAAAGCAATAAAACTGGAAAGCCAAGAATTAACATGAAAACCCGACAAGAAAATTTTTATTAGCTATGCGAAAAATTATTACAATTGTCGTCACACAAAACCTCTCCTCAATCTCAATTATAAAATCTTTCTCTCAAAGCATTGAACCCACTCACATAATCGAACTAGTATATGTTAAGATCAAATTTCTTCACATATTGGTTGATAAAGAAGCCAATGATATAAGCTCTTTTTACGGTAGTTAAAGCGGCCTCTTTTTAATATCTTGTCAAAAAATCCAACAATTGCAAACTCAAAAATTAACCTGATCTTTCACGAACAATATGTTAGTTATGTCTACAAATAAATGAGAGATCGATCAATTTATTATTAAAGACAGATATCATATTACATGAATTGCATATACGTCTCTGAGATTGGAAAATTTATATTAAACTCACCCATCTAAACCATAGATCTAAACTCATAAATGACATAATTGTGTACACAAATTCAAAACATATATATCTATTATTTTATACAAATGTTTTCCTTATTCAAGCTTCACCTAATAATTATTTGTTAATTAAGATATACATTATCTTAATCTTTACTCCTCTTTCAAGAGATGATCTAGTAGCTAAGTGAGAGTACTTAGATTCACTACATAAACACACAATAATAAGTATGAAAGACTTAAACTTCTAGAAAAATTTACTAATTAAGTGTACATCTCTAATCTCTAAGATATAACGTATTAATTACAAGGTGTAGATATAACTTGCAAGTCTCATATATGGATTCCATGTGCAAACAAGTAAATACACATTTTTAAATTTTGTCTTTTTTCCACTAGACTTGTCAATAACCGAATTATTAGTACTATTCTAAATGTGTCACAAGGTTTAATTAATGATCTATTACCTAACTCGGGTCATTTCGATTATCATACAAGTTTGTCGTCATCTCTCAACATTATTTATATTTAACAAGTTGAAAATTAAAGTCAATTTTCATCTAACACAATCTCTAACCTCAATCCACAAAGTATCCCTAAAACAATTAGTAGAAGAGAGAGCAGACAAACAAAAGAAAAAAACAAAAATCAAGTGTTGATTTGAGGTTACTTTTGGAGAACAATTTCAGGCACTAAATAGGGATAATAGAATGCATATATTTATTTTCAAAACCTTTTATCATATAGTGACATTTGAGGAGTCAGAAAAAGAAGAAGAGCATAGAAGAATATGAGGTGTAAAAATGAAATAATGAAGTGAAAGAAAGGTTATATTTTGAAGTTCTGCAAAGAAAGAAATGTGATAGTGGTTGGATAAGATAAACCAAAGAAAATAAAGGACAATATAACTCATAACACTACAAAAGAAGTAGAAAGTGATGATGGTGGAAATTAGTACAAAATAAAAAAGATGCAATTTTTTTTATGCCCTTTTCCTTTTTTACCCATGAGATTCCCTTCCACACTCCCTATGTGTCCATTGCAATTCCATTTTCAATGGTCCACCCTTTTGTACAATTTGATCCCTTTACATTTTTCTTTTAAATTCAAACAAAAAGAAAAAGAAAAAAAGAAAACCCAATTCCTCATAAAGACTATATATATTTCTTTTGATAAACTTAAATTTTTAATTCTAATTTGACTTTAAGTTATATATGAATGTGATCGTAGAGGTGA

mRNA sequence

ATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAAGATTCAAGCAAGCAACCACGCTTCCTCGTGGTGGCAATTCGAGCATTCGACCTATGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGTCTCGGGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGACAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGCAGGAGGAGGTAATCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGAGGTGA

Coding sequence (CDS)

ATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAAGATTCAAGCAAGCAACCACGCTTCCTCGTGGTGGCAATTCGAGCATTCGACCTATGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGTCTCGGGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGACAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGCAGGAGGAGGTAATCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGAGGTGA

Protein sequence

MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGNHEDETNQILTDEMR*

Homology

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BLAST of Chy6G127770 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 27/77 (35.06%), Postives = 38/77 (49.35%), Query Frame = 0


Query: 55  KALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM 114
           K  E + C +CL        DGDK     VLPC H +H  CV+ W  + R+TCPIC+  +
Sbjct: 223 KGDEYDVCAICLDEY----EDGDK---LRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 282

Query: 115 AGGGNHEDETNQILTDE 132
             G   E++  +    E
Sbjct: 283 HRGPGDEEQEEETQEQE 292

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BLAST of Chy6G127770 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08
Identity = 25/67 (37.31%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 60  ETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGN 119
           + C +CL        DGDK     VLPC H +H  CV+ W  + R+TCPIC+  +  G  
Sbjct: 228 DVCAICLDEY----EDGDK---LRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPG 287

Query: 120 HEDETNQ 127
            ED+  +
Sbjct: 288 DEDQEEE 287

[Close]

BLAST of Chy6G127770 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-08
Identity = 25/72 (34.72%), Postives = 37/72 (51.39%), Query Frame = 0


Query: 55  KALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM 114
           K  E + C +CL        DGDK     +LPC H +H  CV+ W  + R+TCPIC+  +
Sbjct: 223 KGDEYDVCAICLDEY----EDGDK---LRILPCAHAYHSRCVDPWLTQTRKTCPICKQPV 282

Query: 115 AGGGNHEDETNQ 127
             G   E++  +
Sbjct: 283 HRGPGDEEQEEE 287

[Close]

BLAST of Chy6G127770 vs. ExPASy Swiss-Prot
Match: Q4R6Y5 (E3 ubiquitin-protein ligase ZNRF4 OS=Macaca fascicularis OX=9541 GN=ZNRF4 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.5e-08
Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 60  ETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEEC-RRTCPICRYSMAGGG 119
           + C +CL        + ++G    +LPC H +H  C++ WF +  RR+CP+C+ S+AG  
Sbjct: 307 DLCAICLD-------EYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAGTE 366

Query: 120 NHEDETNQILTDE 132
           +  D T    +DE
Sbjct: 367 DSFDSTTDSFSDE 372

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BLAST of Chy6G127770 vs. ExPASy Swiss-Prot
Match: Q9NVW2 (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 29/74 (39.19%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 48  LALSSLGKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTC 107
           LA+ S G+    +TC VC++       +G+K      LPC HE+H  C++RW  E   TC
Sbjct: 556 LAMRSFGENDALKTCSVCITEY----TEGNK---LRKLPCSHEYHVHCIDRWLSE-NSTC 615

Query: 108 PICRYSMAGGGNHE 122
           PICR ++   GN E
Sbjct: 616 PICRRAVLASGNRE 621

[Close]

BLAST of Chy6G127770 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.9e-69
Identity = 124/132 (93.94%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGE 60
           MIFNKVFFFFYNN IGFRSRPRFKQAT LPR GNSS+RP+PTDDCTILALSSL KALEGE
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGNH 120
           TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM GGG+H
Sbjct: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH 120

Query: 121 EDETNQILTDEM 133
           EDETNQILTDEM
Sbjct: 121 EDETNQILTDEM 132

[Close]

BLAST of Chy6G127770 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 123/137 (89.78%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRP-RFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEG 60
           M+FNKVFFFFYNNFIGFRSRP RFKQAT LP GGNSS+RPMPTDDCTI+ALSSL KALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM--A 120
           ETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM   
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GGGNHEDETNQILTDEM 133
           GGG+HEDETNQILTDEM
Sbjct: 121 GGGSHEDETNQILTDEM 137

[Close]

BLAST of Chy6G127770 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTI---LALSSLGKAL 60
           M+FN+VFFFFY NFIGFR RP+ KQ T LP GG+S++R M  D+  I   + LSS GKAL
Sbjct: 1   MVFNRVFFFFY-NFIGFRGRPKLKQKTLLPHGGDSTLRQMVEDESRIPDCVTLSSSGKAL 60

Query: 61  EGE-TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAG 120
           EGE  CCVCLSS+       ++G+ TSVLPCLHEFHKVCV+RWFEE RRTCPICRYSM G
Sbjct: 61  EGEMCCCVCLSSI-------EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEG 120

Query: 121 GGNHEDETNQILTDEM 133
            G   +   QILTDEM
Sbjct: 121 AGQGNENGTQILTDEM 128

[Close]

BLAST of Chy6G127770 vs. ExPASy TrEMBL
Match: A0A6A1UIA7 (Protein preY, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR0G008870 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-17
Identity = 59/126 (46.83%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 15  IGFRSRPRFKQATTLPRGGNSSIRPMPTD----DCTILA---LSSLGKALEGE-TCCVCL 74
           IG R++P  K+A   P    S I     D    D T+ A    SS G+  EGE  CCVCL
Sbjct: 102 IGLRAQPALKEA---PSSSYSVINWDDLDEVKEDPTMSARGSSSSSGEVHEGEQQCCVCL 161

Query: 75  SSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGNHEDETNQ 133
           S +        KG  T +LPCLHEFHKVCV+RWF  CR+TCP+CR+SM  GG       +
Sbjct: 162 SRL-------KKGQDTRILPCLHEFHKVCVDRWFNSCRKTCPVCRFSM--GGEDNCRVQE 215

[Close]

BLAST of Chy6G127770 vs. ExPASy TrEMBL
Match: A0A803PEM7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGE 60
           M+FN +    YNNF+  + +PR K+          ++     +     A  S+    EGE
Sbjct: 1   MVFNSLLSTLYNNFMSLKPQPRMKEPPASCDVDEVNVEHKVDEALAESATDSI--TGEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGNH 120
            CCVCLS +        +G  TS+LPC+HEFHK CVERWF  CR+TCP+CR++M      
Sbjct: 61  FCCVCLSRL--------EGEETSILPCMHEFHKECVERWFHACRKTCPVCRFAM-----E 120

Query: 121 EDE---TNQILTDEM 133
           ED+     +  T+EM
Sbjct: 121 EDKCYYAGEFFTEEM 120

[Close]

BLAST of Chy6G127770 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus])

HSP 1 Score: 256 bits (655), Expect = 7.90e-86
Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 6   VFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGETCCVC 65
           VFFFFYNN IGFRSRPRFKQAT LPR GNSS+RP+PTDDCTILALSSL KALEGETCCVC
Sbjct: 1   VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVC 60

Query: 66  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGNHEDETN 125
           LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM GGG+HEDETN
Sbjct: 61  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN 120

Query: 126 QILTDEM 132
           QILTDEM
Sbjct: 121 QILTDEM 127

[Close]

BLAST of Chy6G127770 vs. NCBI nr
Match: KAA0052944.1 (E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (642), Expect = 1.06e-83
Identity = 123/137 (89.78%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRP-RFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEG 60
           M+FNKVFFFFYNNFIGFRSRP RFKQAT LP GGNSS+RPMPTDDCTI+ALSSL KALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSSMGNTDRDGDKGVG--TSVLPCLHEFHKVCVERWFEECRRTCPICRYSM--A 120
           ETCCVCLSSMGNTD DGDKGVG  TSVLPCLHEFHKVCVERWFEECRRTCPICRYSM   
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GGGNHEDETNQILTDEM 132
           GGG+HEDETNQILTDEM
Sbjct: 121 GGGSHEDETNQILTDEM 137

[Close]

BLAST of Chy6G127770 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 2.72e-74
Identity = 109/134 (81.34%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGE 60
           M+FNKVFFFFYNNF+GFRSR R KQAT LP GGN S+RP+  DDC I+ LSS  KALEGE
Sbjct: 1   MVFNKVFFFFYNNFMGFRSRLRCKQATPLPHGGNLSLRPITPDDCAIVTLSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTS--VLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGG 120
           TCCVCLSSMGN D D DKGVGTS  VLPCLHEFHKVCV+RWFEECRRTCPICRYSM GGG
Sbjct: 61  TCCVCLSSMGNKDGDRDKGVGTSTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG 120

Query: 121 NHEDETNQILTDEM 132
           +HED TNQILTDEM
Sbjct: 121 SHEDGTNQILTDEM 134

[Close]

BLAST of Chy6G127770 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205 bits (521), Expect = 2.33e-65
Identity = 97/133 (72.93%), Postives = 112/133 (84.21%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGE 60
           M+FNK+FFFFYNN IGFR+ P  KQAT LPR  +SS+RPM  DDC + ALSS  KALEGE
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGN- 120
           TCCVCLS MGN D+D  +G+GTSVLPC HEFHK+C++RWFEECRRTCPICRYSM GGGN 
Sbjct: 61  TCCVCLSCMGNKDKD--EGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120

Query: 121 HEDETNQILTDEM 132
           HED +N++LTDEM
Sbjct: 121 HEDGSNEMLTDEM 130

[Close]

BLAST of Chy6G127770 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202 bits (515), Expect = 1.91e-64
Identity = 96/133 (72.18%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNFIGFRSRPRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGE 60
           M+FNK+FFFFYNN IGFR+ P  KQAT LPR  +SS+RP   DDC + ALSS  KALEGE
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPTTPDDC-VAALSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGN- 120
           TCCVCLS MGN D+D  +G+GTSVLPC HEFHK+C++RWFEECRRTCPICRYSM GGGN 
Sbjct: 61  TCCVCLSCMGNKDKD--EGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120

Query: 121 HEDETNQILTDEM 132
           HED +N++LTDEM
Sbjct: 121 HEDGSNEMLTDEM 130

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BLAST of Chy6G127770 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 31/80 (38.75%), Postives = 39/80 (48.75%), Query Frame = 0


Query: 54  GKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR-TCPICRY 113
           G+  E E C VCL  M   D           LPC HEFH +CV+ WF   R+  CP+CR+
Sbjct: 18  GEGREEECCSVCLMRMEAKD-------VIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRF 77

Query: 114 SMAGGGNHEDETNQILTDEM 133
           S          T  +LTDE+
Sbjct: 78  S---------PTTILLTDEL 81

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BLAST of Chy6G127770 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 32/114 (28.07%), Postives = 48/114 (42.11%), Query Frame = 0


Query: 21  PRFKQATTLPRGGNSSIRPMPTDDCTILALSSLGKALEGE----TCCVCLSSMGNTDRDG 80
           P  K     P  G S  +   T       L S  ++ +G     TC VCL  +       
Sbjct: 166 PVHKYKVLDPENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQV------- 225

Query: 81  DKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGNHEDETNQILTD 131
             G     LPCLH+FH  C++ W  + + TCP+C++    G   +DE +   +D
Sbjct: 226 TVGEIVRTLPCLHQFHAGCIDPWLRQ-QGTCPVCKFRAHSGWQEQDEIDDDASD 271

[Close]

BLAST of Chy6G127770 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-08
Identity = 26/75 (34.67%), Postives = 36/75 (48.00%), Query Frame = 0


Query: 39  PMPTD--DCTILALSSLGKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV 98
           P P D  D   + L +  ++ +   C +CL      D           LPC HEFHK CV
Sbjct: 465 PAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEAD-------SIRTLPCHHEFHKTCV 524

Query: 99  ERWFEECRRTCPICR 112
           ++W +E  R CP+CR
Sbjct: 525 DKWLKEIHRVCPLCR 532

[Close]

BLAST of Chy6G127770 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 28/95 (29.47%), Postives = 41/95 (43.16%), Query Frame = 0


Query: 29  LPRGGNSSIRPMPTDDCTILALSSLGKALE----GETCCVCLSSMGNTDRDGDKGVGTSV 88
           LP GG   +  MP D    +        LE      TC +C+        D   G    +
Sbjct: 197 LPHGG-QGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICID-------DYCVGEKLRI 256

Query: 89  LPCLHEFHKVCVERWFEECRRTCPICRYSMAGGGN 120
           LPC H++H VC++ W   CR  CP+C+ +   G +
Sbjct: 257 LPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGND 283

[Close]

BLAST of Chy6G127770 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.7e-07
Identity = 24/83 (28.92%), Postives = 39/83 (46.99%), Query Frame = 0


Query: 37  IRPMPTDDCTILALSSLGKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV 96
           ++ MPT+  T      L +     TC +C+        D   G    +LPC H++H VC+
Sbjct: 95  LQSMPTEVYT----GVLEEGSTSVTCAICID-------DYRVGEILRILPCKHKYHAVCI 154

Query: 97  ERWFEECRRTCPICRYSMAGGGN 120
           + W   CR  CP+C+ +   G +
Sbjct: 155 DSWLGRCRSFCPVCKQNPRTGND 166

The following BLAST results are available for this feature:

BLAST of Chy6G127770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91XF4	2.9e-08	35.06	E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1	[more]
Q9H6Y7	5.0e-08	37.31	E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1	[more]
Q5XIL0	6.5e-08	34.72	E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ...	[more]
Q4R6Y5	8.5e-08	32.88	E3 ubiquitin-protein ligase ZNRF4 OS=Macaca fascicularis OX=9541 GN=ZNRF4 PE=2 S...	[more]
Q9NVW2	1.1e-07	39.19	E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3	[more]

BLAST of Chy6G127770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W7	6.9e-69	93.94	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 P...	[more]
A0A5D3CJ45	1.3e-64	89.78	E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1CW69	4.4e-39	63.97	E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6A1UIA7	1.2e-17	46.83	Protein preY, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR0G008870 PE=4 ...	[more]
A0A803PEM7	1.8e-16	37.78	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Chy6G127770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649999.1	7.90e-86	93.70	hypothetical protein Csa_010276, partial [Cucumis sativus]	[more]
KAA0052944.1	1.06e-83	89.78	E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiq...	[more]
XP_038906276.1	2.72e-74	81.34	E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]	[more]
KAG6577791.1	2.33e-65	72.93	Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7015830.1	1.91e-64	72.18	Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Chy6G127770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51325.1	1.8e-08	38.75	RING/U-box superfamily protein	[more]
AT3G55530.1	2.3e-08	28.07	RING/U-box superfamily protein	[more]
AT5G45290.1	3.9e-08	34.67	RING/U-box superfamily protein	[more]
AT1G35630.1	2.0e-07	29.47	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35625.1	5.7e-07	28.92	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 62..110 e-value: 3.2E-6 score: 36.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 61..111 e-value: 1.3E-9 score: 38.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..111 score: 11.913911
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 52..127 e-value: 4.1E-14 score: 53.5
None	No IPR available	PANTHER	PTHR45977:SF13	GB\|AAF27103.1	coord: 45..120
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 45..120
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 56..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G127770.1	Chy6G127770.1	mRNA