
Chy6G127310 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGAAGAAATCGCAAATGGCTTCCCGGCTGAAGAAAGCATTGATGAAACTCAAGGCAGTTGTCCGTCTCTGTCTCCTTCCCCGGCGACAGTCACGACGGCTCGGATCATTCGATTCTGACGACGATCGAAAAGTAGGTATACGGATTGTGTTGGAAGATCAGAGTAGAATCGCTGAGAGTTCTTTTGTGAGAAAGCTTGAGCGTGCTTCCAGTTCAAGATACGGAGGCTATGAAGAAGATGTCGATCAACGAGCGGAGATTTTCATCGAGAATTTCCGCCGTCATTTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGGTATTATAGAGTTAATAGCTACGAAACAGAGTATGAACAGAGATCTCCGTCGTCGATTACGTGATACACACACATATATTTATATTGAAATTGAAGTGAACTTGTTTTGTGTTGTTGAGTACTGTAATTAAATTTCTTTTCTAATTATTGACTTCTCTTGGAAATTATTCATCGGCGATCGCTTCAATTTTCCAGATCTGTAATTTTTATTTTGTATAACATTGTTGGTATTCATATAACTTGAATTTAATGTCAATCTTTGTTTTGTTGGACTGAATCATTATTATTTTATACTATCTTCGTTCACATTATAAATTTATCTTCAAATATTTGTAGACAACAACACATTATCAATGGATCTTACCATATTTTCAAAGCATGTTGCCTACAAGTATAATAAATTTTTCCTTGAAAATGAGCTTATGAGGTTAGTAAAATTGGATAAACAAAAAAATTATTGATTCGATCTTAAGCATATGAGGTTAGTAAAACTGGACATTATTGTATTAAAATTGAATAAACAAATTCAGTTTTAAGCATATGAGGTTAGTAAAATTGGACATTATTATTTTAAAGTTGGATAAACCAAAAGTTATTCATTCAATTCTAACTCTCAAGGAGAAAAATAAAAATGGCAATATATAATTTAATTCTCAAATTGAAACTTAAAAATGAAAATTTTATTTTTACATAAAGGGGTTTAAAAGTAAATTTTAATGGATTCAATAAAAAGAAAAAACTATTTATCAAACACAAAATATAGTTAACATTCTTTTATAATAATTATTATTTTAAATTTTAAAATGAGAGATTTTAAAAAATAGTAGATTTTACAAAATATTTACAACCTATAGCGAATTTTTATCGGTCTTGATATGCTATAGTGATAGAAGACTATGAGTGATTTAATCCAAAATTTTGTAAATATTTTAATTTATTTTGCTATTTTTAAAAATGACCTTTTTAAAATCAATCTCAAACAATATATTTATTCTTTATTTTATTTTTAATCGGTGGTATATTTTAAAAATTATTATAAAGTGCAAAATTACTGAAAAATATTTACGATATGTAGTAAAATTTTGAATTCTATTAATATAAAAATCTATCGAGATATATATATATATATAATCTAAATTTTTTCTTTTTTTCTGTTATTTCTCACCATTTTCCTAAAAACAACTCTTGGTTTTTATTAAACAAAATCTAATTTTCAATTAATATTTATGAAAAATACGAAATTGTAAAAAATAGAACCGACAAAATTCAAGTGTAATTAATTTTTTTTTTGTTACAGTGGATAAATAGTTTGTAAATTTTATTTTACGTTTAAATATTCTCATATTTTTCTAAGTTTCCCTGAAGTTTCAATTCATAAATACAACATACGTGTCACAATTTAATTGGATAAAAGAACTCAATATTCGAATCTTCACAATCGAATCAAAATCAGATGAACTTTCTCGTATAAATTGAACTTTCATTACAGTCTTCGTTCGTTCCGCTTCATTTTCATTTTCACAGTCCAAAGAACAAAAGGAGATGGACTCGCCAATGGGGCTTCGCCTCGAGGTGACATTAAACAAGCTCAAAGCATTTCTCCGTCTCTGCCTCCTTCTCCGACGACGCTCCATCTACCGGACACGAAATGTCTTGGAAGATGATCAAACCGCGAGAAACCTTGAACGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCGAGCGGAGATCTTCATCGAGAATTTTCGTCTTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGAATGGAGTTAATGATAAAAGCTTTGAAACAGAGTATGAAGAAATATTGCCGCCACAGCCACCGTCACCGCCGATTGTATGA ATGGCAGAGAAGAAATCGCAAATGGCTTCCCGGCTGAAGAAAGCATTGATGAAACTCAAGGCAGTTGTCCGTCTCTGTCTCCTTCCCCGGCGACAGTCACGACGGCTCGGATCATTCGATTCTGACGACGATCGAAAAGTAGGTATACGGATTGTGTTGGAAGATCAGAGTAGAATCGCTGAGAGTTCTTTTGTGAGAAAGCTTGAGCGTGCTTCCAGTTCAAGATACGGAGGCTATGAAGAAGATGTCGATCAACGAGCGGAGATTTTCATCGAGAATTTCCGCCGTCATTTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGTCTTCGTTCGTTCCGCTTCATTTTCATTTTCACAGTCCAAAGAACAAAAGGAGATGGACTCGCCAATGGGGCTTCGCCTCGAGATGATCAAACCGCGAGAAACCTTGAACGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCGAGCGGAGATCTTCATCGAGAATTTTCGTCTTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGAATGGAGTTAATGATAAAAGCTTTGAAACAGAGTATGAAGAAATATTGCCGCCACAGCCACCGTCACCGCCGATTGTATGA ATGGCAGAGAAGAAATCGCAAATGGCTTCCCGGCTGAAGAAAGCATTGATGAAACTCAAGGCAGTTGTCCGTCTCTGTCTCCTTCCCCGGCGACAGTCACGACGGCTCGGATCATTCGATTCTGACGACGATCGAAAAGTAGGTATACGGATTGTGTTGGAAGATCAGAGTAGAATCGCTGAGAGTTCTTTTGTGAGAAAGCTTGAGCGTGCTTCCAGTTCAAGATACGGAGGCTATGAAGAAGATGTCGATCAACGAGCGGAGATTTTCATCGAGAATTTCCGCCGTCATTTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGTCTTCGTTCGTTCCGCTTCATTTTCATTTTCACAGTCCAAAGAACAAAAGGAGATGGACTCGCCAATGGGGCTTCGCCTCGAGATGATCAAACCGCGAGAAACCTTGAACGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCGAGCGGAGATCTTCATCGAGAATTTTCGTCTTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGAATGGAGTTAATGATAAAAGCTTTGAAACAGAGTATGAAGAAATATTGCCGCCACAGCCACCGTCACCGCCGATTGTATGA MAEKKSQMASRLKKALMKLKAVVRLCLLPRRQSRRLGSFDSDDDRKVGIRIVLEDQSRIAESSFVRKLERASSSRYGGYEEDVDQRAEIFIENFRRHLRLERQISLQLSLRSFRFIFIFTVQRTKGDGLANGASPRDDQTARNLERDSSSRYESCEEFEDDVDHRAEIFIENFRLQLRLERQISLQLRLNGVNDKSFETEYEEILPPQPPSPPIV* Homology
BLAST of Chy6G127310 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43 Identity = 101/108 (93.52%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Chy6G127310 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40 Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy6G127310 vs. ExPASy TrEMBL
Match: A0A0A0L6A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 2.7e-30 Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Chy6G127310 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 4.7e-19 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of Chy6G127310 vs. ExPASy TrEMBL
Match: A0A1R3J730 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19032 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.1e-07 Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 0
BLAST of Chy6G127310 vs. NCBI nr
Match: KAE8650012.1 (hypothetical protein Csa_009473 [Cucumis sativus]) HSP 1 Score: 314 bits (805), Expect = 1.05e-105 Identity = 181/243 (74.49%), Postives = 194/243 (79.84%), Query Frame = 0
BLAST of Chy6G127310 vs. NCBI nr
Match: XP_011652707.1 (uncharacterized protein LOC105435054 [Cucumis sativus]) HSP 1 Score: 177 bits (449), Expect = 2.40e-53 Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of Chy6G127310 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 176 bits (446), Expect = 8.30e-53 Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy6G127310 vs. NCBI nr
Match: XP_031739290.1 (uncharacterized protein LOC116402928 [Cucumis sativus]) HSP 1 Score: 142 bits (359), Expect = 9.09e-40 Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Chy6G127310 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108 bits (271), Expect = 2.25e-26 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of Chy6G127310 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 20/39 (51.28%), Postives = 32/39 (82.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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