Chy6G125980 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G125980
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Homeobox-leucine zipper protein
Location	chrH06: 24888308 .. 24889283 (+)
RNA-Seq Expression	Chy6G125980
Synteny	Chy6G125980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTTTCTCGGGAAACAAACGGTTTATATTGTGGGAAAACTCATGGGGTGTTATGGTAAATTTGTGCAGAAGCAAAAGTTGGCGTTGGCGAAACAATTGGGTCTCCGGCCAAGACAAGTCGAAGTTTGGTTCCAAAATAGAAGAGCAAGGTGAGGAATTTTCCTTCACCTATAAAGTCCATTCCACTTTAGTCAACATAACAATAATATTCACCATATATTCTACAAAATTATATACTTTACTCCTTAAAGTTCTTATTTTATCCAATTAAATCTATTTTTCTATCCAATCAGTTGACAAAGCTTCTGATAATGGAAATTCTTTAAAAAAGAAAGCAAGCAAGAAAGGAAGAAAAGCTTTTATTTTATGTCTAACCACGGATTTAGCATAAGTCGAATGGGATTATTAAGGTTATTTTCACATAAATAATAAAGGTTGGGTGAACAAATTTTGTAGATCCGTCAATTTGTCTTACACCACCTGATTAAGTTAAGATTTAGTACAAGTTAAAGAGTTAAATTGTGGTATGATGTTAGTATTAATTAAAAAAGGAAAGTTTGTAAGAAAGGGGTGTTTGTGGGTAATAATTGATGATTAATAATTTAGGAATATTGATTGAAACAGGACAAAGTTGAAGCAAACGGAAGTAGATTGCGAATTCCTAAAGAGATGTTGTGAGAATCTAACGGAGGAGAATAGACGGTTGCAAAAAGAAGTACAAGAACTGAGAGCACTCAAACTTTCCCCACAGTTCTACATGCACATGACCCCACCCACCACCCTCACCATGTGCCCATCATGTGAGCGTGTCGCTGTCCCGCCCTCCTCCACATCAGCTCCCCAGCCCACCGTCACACGAATGGGCCAGGCCCAACCTCAGCCCCACCACGCTCGCCCTATCCACCACATCAACCCCTGGGCCTCCCCCATACCCACCCGGCCCTTCAACGCCCTCCACCCTCGCTCGTAA

mRNA sequence

ATGGAAGATTTTCTCGGGAAACAAACGGTTTATATTGTGGGAAAACTCATGGGGTGTTATGGTAAATTTGTGCAGAAGCAAAAGTTGGCGTTGGCGAAACAATTGGGTCTCCGGCCAAGACAAGTCGAAGTTTGGTTCCAAAATAGAAGAGCAAGGACAAAGTTGAAGCAAACGGAAGTAGATTGCGAATTCCTAAAGAGATGTTGTGAGAATCTAACGGAGGAGAATAGACGGTTGCAAAAAGAAGTACAAGAACTGAGAGCACTCAAACTTTCCCCACAGTTCTACATGCACATGACCCCACCCACCACCCTCACCATGTGCCCATCATGTGAGCGTGTCGCTGTCCCGCCCTCCTCCACATCAGCTCCCCAGCCCACCGTCACACGAATGGGCCAGGCCCAACCTCAGCCCCACCACGCTCGCCCTATCCACCACATCAACCCCTGGGCCTCCCCCATACCCACCCGGCCCTTCAACGCCCTCCACCCTCGCTCGTAA

Coding sequence (CDS)

ATGGAAGATTTTCTCGGGAAACAAACGGTTTATATTGTGGGAAAACTCATGGGGTGTTATGGTAAATTTGTGCAGAAGCAAAAGTTGGCGTTGGCGAAACAATTGGGTCTCCGGCCAAGACAAGTCGAAGTTTGGTTCCAAAATAGAAGAGCAAGGACAAAGTTGAAGCAAACGGAAGTAGATTGCGAATTCCTAAAGAGATGTTGTGAGAATCTAACGGAGGAGAATAGACGGTTGCAAAAAGAAGTACAAGAACTGAGAGCACTCAAACTTTCCCCACAGTTCTACATGCACATGACCCCACCCACCACCCTCACCATGTGCCCATCATGTGAGCGTGTCGCTGTCCCGCCCTCCTCCACATCAGCTCCCCAGCCCACCGTCACACGAATGGGCCAGGCCCAACCTCAGCCCCACCACGCTCGCCCTATCCACCACATCAACCCCTGGGCCTCCCCCATACCCACCCGGCCCTTCAACGCCCTCCACCCTCGCTCGTAA

Protein sequence

MEDFLGKQTVYIVGKLMGCYGKFVQKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIHHINPWASPIPTRPFNALHPRS*

Homology

[Close]

BLAST of Chy6G125980 vs. ExPASy Swiss-Prot
Match: Q05466 (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.9e-44
Identity = 101/148 (68.24%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQK ALAKQLGLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEENRRLQKEV E
Sbjct: 154 KQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTE 213

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHM+PPTTLTMCPSCE V+VPP                 PQP  A   H
Sbjct: 214 LRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPP-----------------PQPQAATSAH 273

Query: 146 H----INPWASPIPTR---PFNALHPRS 167
           H    +N WA          F+AL PRS
Sbjct: 274 HRSLPVNAWAPATRISHGLTFDALRPRS 284

[Close]

BLAST of Chy6G125980 vs. ExPASy Swiss-Prot
Match: P46602 (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=1 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 6.0e-43
Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = 0


Query: 5   LGKQTVYIVGKLMGCYGKFVQKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEF 64
           L K+   ++ +    +     KQK+ALAKQL LR RQVEVWFQNRRARTKLKQTEVDCE+
Sbjct: 166 LSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEY 225

Query: 65  LKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAP 124
           LKRCCENLT+ENRRLQKEV ELRALKLSP  YMHM PPTTLTMCPSCERVAV  SS+S  
Sbjct: 226 LKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSV- 285

Query: 125 QPTVTRMGQAQPQPHHARPIHHINPWAS-PIPTRPFNALH 164
                    A P  + + P+  ++PWA+ P+  RP    H
Sbjct: 286 ---------APPVMNSSSPMGPMSPWAAMPLRQRPAAGSH 315

[Close]

BLAST of Chy6G125980 vs. ExPASy Swiss-Prot
Match: P92953 (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-41
Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQL LR RQVEVWFQNRRARTKLKQTEVDCE+LKRCC+NLTEENRRLQKEV E
Sbjct: 188 KQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSE 247

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSS-TSAPQPTVTRMGQAQPQPHHARP 144
           LRALKLSP  YMHMTPPTTLTMCPSCERV+   ++ T+AP  T T     +P P    P
Sbjct: 248 LRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLTP 306

[Close]

BLAST of Chy6G125980 vs. ExPASy Swiss-Prot
Match: Q01I23 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.4e-38
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           +QK  LA+QLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQKEVQE
Sbjct: 107 RQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQE 166

Query: 86  LRALKL-SPQFYMHMTPPTTLTMCPSCERVAVPPSSTSA 124
           LRALKL SP  YM+M+PPTTLTMCPSCERV+   +++SA
Sbjct: 167 LRALKLVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSA 205

[Close]

BLAST of Chy6G125980 vs. ExPASy Swiss-Prot
Match: Q0JB92 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.4e-38
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           +QK  LA+QLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQKEVQE
Sbjct: 107 RQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQE 166

Query: 86  LRALKL-SPQFYMHMTPPTTLTMCPSCERVAVPPSSTSA 124
           LRALKL SP  YM+M+PPTTLTMCPSCERV+   +++SA
Sbjct: 167 LRALKLVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSA 205

[Close]

BLAST of Chy6G125980 vs. ExPASy TrEMBL
Match: A0A0A0L6T6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019370 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.4e-73
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE
Sbjct: 135 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 194

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQ QPHHARPIH
Sbjct: 195 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQSQPHHARPIH 254

Query: 146 HINPWASPIPTRPFNALHPRS 167
           HINPWASPIPTRPFNALHPRS
Sbjct: 255 HINPWASPIPTRPFNALHPRS 275

[Close]

BLAST of Chy6G125980 vs. ExPASy TrEMBL
Match: A0A5D3CLM5 (Homeobox-leucine zipper protein HAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00510 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 136/141 (96.45%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE
Sbjct: 135 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 194

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPP STSAPQPT+TRM QAQPQ HH RPIH
Sbjct: 195 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPP-STSAPQPTLTRMPQAQPQAHHPRPIH 254

Query: 146 HINPWASPIPTRPFNALHPRS 167
           HINPWASPIPTRPFNALHPRS
Sbjct: 255 HINPWASPIPTRPFNALHPRS 274

[Close]

BLAST of Chy6G125980 vs. ExPASy TrEMBL
Match: A0A1S3BJZ9 (homeobox-leucine zipper protein HAT4 OS=Cucumis melo OX=3656 GN=LOC103490870 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 136/141 (96.45%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE
Sbjct: 135 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 194

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPP STSAPQPT+TRM QAQPQ HH RPIH
Sbjct: 195 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPP-STSAPQPTLTRMPQAQPQAHHPRPIH 254

Query: 146 HINPWASPIPTRPFNALHPRS 167
           HINPWASPIPTRPFNALHPRS
Sbjct: 255 HINPWASPIPTRPFNALHPRS 274

[Close]

BLAST of Chy6G125980 vs. ExPASy TrEMBL
Match: A0A6J1HKW5 (homeobox-leucine zipper protein HAT4-like OS=Cucurbita maxima OX=3661 GN=LOC111465087 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.1e-63
Identity = 130/141 (92.20%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLT+ENRRLQKEVQE
Sbjct: 141 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQE 200

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAV P+STSAP  TVTR+GQAQ QPHHARPI 
Sbjct: 201 LRALKLSPQFYMHMTPPTTLTMCPSCERVAV-PTSTSAP-TTVTRVGQAQAQPHHARPI- 260

Query: 146 HINPWASPIPTRPFNALHPRS 167
           H+NPWAS IP RPFNALHPRS
Sbjct: 261 HLNPWASAIPARPFNALHPRS 278

[Close]

BLAST of Chy6G125980 vs. ExPASy TrEMBL
Match: A0A6J1E9Y0 (homeobox-leucine zipper protein HAT4 OS=Cucurbita moschata OX=3662 GN=LOC111431205 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.0e-61
Identity = 130/141 (92.20%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLT+ENRRLQKEVQE
Sbjct: 141 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQE 200

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPP STSAP  TVTR+GQA  Q HHARPI 
Sbjct: 201 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPP-STSAP-TTVTRVGQA--QAHHARPI- 260

Query: 146 HINPWASPIPTRPFNALHPRS 167
           HINPWAS IP RPFNALHPRS
Sbjct: 261 HINPWASAIPARPFNALHPRS 276

[Close]

BLAST of Chy6G125980 vs. NCBI nr
Match: XP_004147222.1 (homeobox-leucine zipper protein HAT4 [Cucumis sativus] >KGN55846.1 hypothetical protein Csa_010406 [Cucumis sativus])

HSP 1 Score: 285 bits (729), Expect = 1.60e-94
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE
Sbjct: 135 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 194

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQ QPHHARPIH
Sbjct: 195 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQSQPHHARPIH 254

Query: 146 HINPWASPIPTRPFNALHPRS 166
           HINPWASPIPTRPFNALHPRS
Sbjct: 255 HINPWASPIPTRPFNALHPRS 275

[Close]

BLAST of Chy6G125980 vs. NCBI nr
Match: XP_008448815.2 (PREDICTED: homeobox-leucine zipper protein HAT4 [Cucumis melo] >KAA0041070.1 homeobox-leucine zipper protein HAT4 [Cucumis melo var. makuwa] >TYK12038.1 homeobox-leucine zipper protein HAT4 [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (697), Expect = 1.13e-89
Identity = 136/141 (96.45%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE
Sbjct: 135 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 194

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPS TSAPQPT+TRM QAQPQ HH RPIH
Sbjct: 195 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPS-TSAPQPTLTRMPQAQPQAHHPRPIH 254

Query: 146 HINPWASPIPTRPFNALHPRS 166
           HINPWASPIPTRPFNALHPRS
Sbjct: 255 HINPWASPIPTRPFNALHPRS 274

[Close]

BLAST of Chy6G125980 vs. NCBI nr
Match: XP_038906160.1 (homeobox-leucine zipper protein HAT4 [Benincasa hispida])

HSP 1 Score: 257 bits (656), Expect = 2.26e-83
Identity = 131/141 (92.91%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE
Sbjct: 142 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 201

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPS+++  QPTVTRMGQAQ Q HHARPIH
Sbjct: 202 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSTSA--QPTVTRMGQAQSQAHHARPIH 261

Query: 146 HINPWASPIPTRPFNALHPRS 166
            INPWAS IP RPFNALHPRS
Sbjct: 262 -INPWASAIPARPFNALHPRS 279

[Close]

BLAST of Chy6G125980 vs. NCBI nr
Match: XP_022965141.1 (homeobox-leucine zipper protein HAT4-like [Cucurbita maxima])

HSP 1 Score: 252 bits (644), Expect = 1.45e-81
Identity = 130/141 (92.20%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLT+ENRRLQKEVQE
Sbjct: 141 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQE 200

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVP +STSAP  TVTR+GQAQ QPHHARPIH
Sbjct: 201 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVP-TSTSAPT-TVTRVGQAQAQPHHARPIH 260

Query: 146 HINPWASPIPTRPFNALHPRS 166
            +NPWAS IP RPFNALHPRS
Sbjct: 261 -LNPWASAIPARPFNALHPRS 278

[Close]

BLAST of Chy6G125980 vs. NCBI nr
Match: KAG6577673.1 (Homeobox-leucine zipper protein HAT2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015710.1 Homeobox-leucine zipper protein HAT2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251 bits (642), Expect = 2.92e-81
Identity = 131/141 (92.91%), Postives = 133/141 (94.33%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLT+ENRRLQKEVQE
Sbjct: 141 KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQE 200

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPS TSAP  TVTR+GQAQ Q HHARPIH
Sbjct: 201 LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPS-TSAPT-TVTRVGQAQAQAHHARPIH 260

Query: 146 HINPWASPIPTRPFNALHPRS 166
            INPWAS IP RPFNALHPRS
Sbjct: 261 -INPWASAIPARPFNALHPRS 278

[Close]

BLAST of Chy6G125980 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45
Identity = 101/148 (68.24%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQK ALAKQLGLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEENRRLQKEV E
Sbjct: 154 KQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTE 213

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSPQFYMHM+PPTTLTMCPSCE V+VPP                 PQP  A   H
Sbjct: 214 LRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPP-----------------PQPQAATSAH 273

Query: 146 H----INPWASPIPTR---PFNALHPRS 167
           H    +N WA          F+AL PRS
Sbjct: 274 HRSLPVNAWAPATRISHGLTFDALRPRS 284

[Close]

BLAST of Chy6G125980 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 175.3 bits (443), Expect = 4.2e-44
Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = 0


Query: 5   LGKQTVYIVGKLMGCYGKFVQKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEF 64
           L K+   ++ +    +     KQK+ALAKQL LR RQVEVWFQNRRARTKLKQTEVDCE+
Sbjct: 166 LSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEY 225

Query: 65  LKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAP 124
           LKRCCENLT+ENRRLQKEV ELRALKLSP  YMHM PPTTLTMCPSCERVAV  SS+S  
Sbjct: 226 LKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSV- 285

Query: 125 QPTVTRMGQAQPQPHHARPIHHINPWAS-PIPTRPFNALH 164
                    A P  + + P+  ++PWA+ P+  RP    H
Sbjct: 286 ---------APPVMNSSSPMGPMSPWAAMPLRQRPAAGSH 315

[Close]

BLAST of Chy6G125980 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAKQL LR RQVEVWFQNRRARTKLKQTEVDCE+LKRCC+NLTEENRRLQKEV E
Sbjct: 188 KQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSE 247

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSS-TSAPQPTVTRMGQAQPQPHHARP 144
           LRALKLSP  YMHMTPPTTLTMCPSCERV+   ++ T+AP  T T     +P P    P
Sbjct: 248 LRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLTP 306

[Close]

BLAST of Chy6G125980 vs. TAIR 10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 92/145 (63.45%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAK+L L  RQVEVWFQNRRARTKLKQTEVDCE+LKRC E LTEENRRLQKE  E
Sbjct: 155 KQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAME 214

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LR LKLSPQFY  MTPPTTL MCPSCERV  P SS                  H+ RP+ 
Sbjct: 215 LRTLKLSPQFYGQMTPPTTLIMCPSCERVGGPSSSN---------------HHHNHRPV- 274

Query: 146 HINPWAS----PIPTRPFNALHPRS 167
            INPW +          F AL PRS
Sbjct: 275 SINPWVACAGQVAHGLNFEALRPRS 283

[Close]

BLAST of Chy6G125980 vs. TAIR 10
Match: AT4G17460.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-37
Identity = 86/141 (60.99%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 26  KQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQE 85
           KQKLALAK+LGL  RQVEVWFQNRRARTKLKQTEVDCE+LKRC E LTEENRRL+KE  E
Sbjct: 160 KQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAE 219

Query: 86  LRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSSTSAPQPTVTRMGQAQPQPHHARPIH 145
           LRALKLSP+ Y  M+PPTTL MCPSCERVA P SS                  H+ R + 
Sbjct: 220 LRALKLSPRLYGQMSPPTTLLMCPSCERVAGPSSSN-----------------HNQRSV- 279

Query: 146 HINPWASPIPTRPFNALHPRS 167
            ++PW        F+ + PRS
Sbjct: 280 SLSPWLQMAHGSTFDVMRPRS 282

The following BLAST results are available for this feature:

BLAST of Chy6G125980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05466	1.9e-44	68.24	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=...	[more]
P46602	6.0e-43	60.63	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=...	[more]
P92953	1.5e-41	75.63	Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4...	[more]
Q01I23	4.4e-38	82.83	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q0JB92	4.4e-38	82.83	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Chy6G125980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6T6	3.4e-73	99.29	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019370 PE...	[more]
A0A5D3CLM5	1.7e-69	96.45	Homeobox-leucine zipper protein HAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BJZ9	1.7e-69	96.45	homeobox-leucine zipper protein HAT4 OS=Cucumis melo OX=3656 GN=LOC103490870 PE=...	[more]
A0A6J1HKW5	4.1e-63	92.20	homeobox-leucine zipper protein HAT4-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9Y0	3.0e-61	92.20	homeobox-leucine zipper protein HAT4 OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]

BLAST of Chy6G125980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147222.1	1.60e-94	99.29	homeobox-leucine zipper protein HAT4 [Cucumis sativus] >KGN55846.1 hypothetical ...	[more]
XP_008448815.2	1.13e-89	96.45	PREDICTED: homeobox-leucine zipper protein HAT4 [Cucumis melo] >KAA0041070.1 hom...	[more]
XP_038906160.1	2.26e-83	92.91	homeobox-leucine zipper protein HAT4 [Benincasa hispida]	[more]
XP_022965141.1	1.45e-81	92.20	homeobox-leucine zipper protein HAT4-like [Cucurbita maxima]	[more]
KAG6577673.1	2.92e-81	92.91	Homeobox-leucine zipper protein HAT2, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Chy6G125980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16780.1	1.3e-45	68.24	homeobox protein 2	[more]
AT3G60390.1	4.2e-44	60.63	homeobox-leucine zipper protein 3	[more]
AT2G44910.1	1.0e-42	75.63	homeobox-leucine zipper protein 4	[more]
AT5G47370.1	1.6e-38	63.45	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT4G17460.1	1.0e-37	60.99	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..92
None	No IPR available	GENE3D	1.10.10.60		coord: 21..54 e-value: 7.3E-12 score: 46.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..134
None	No IPR available	PANTHER	PTHR45714:SF11	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3	coord: 26..154
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 26..154
None	No IPR available	CDD	cd14686	bZIP	coord: 49..88 e-value: 0.00280639 score: 32.5173
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 27..36 score: 45.44 coord: 36..52 score: 58.6
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 1..60 e-value: 6.2E-4 score: 26.4
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 26..54 e-value: 1.4E-9 score: 37.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 26..56 score: 12.308851
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 25..57 e-value: 5.16182E-8 score: 45.3121
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 56..99 e-value: 2.6E-27 score: 106.7
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 56..90 e-value: 1.5E-11 score: 44.3
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 31..54
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 26..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G125980.1	Chy6G125980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding