Chy6G125600 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G125600
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	chrH06: 24389400 .. 24391709 (-)
RNA-Seq Expression	Chy6G125600
Synteny	Chy6G125600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGCATCTAGCCCAACCGCCAATTGCTCCCGCGATGTACGTGTATGTGCAAATGTACTTGATATTCTTAATCTATCCCTTGGCAATAACCTACGTCCATGTTGTCAATTGATTCAAGGGCTAGTAGCTGTTGAGGTTGATATTTGTATACAGTCTGCCATAAGTAATGCACTTAGAGCAAATCTTTTAGGCCTACTCCCTATAAACCTATCTATTGAGTCGTTCGTGCTCCGTATATTGGCCAGCAGATGCAACTGAGCTACTTGATTTAAGTTTATCCCCTAATTAGTCTATACAACTTCAAGATGAGAAAATAAAATAAAATAAGAAGTTGTAATACTTTATTTTATGTATGCACTTATGTTCTTTTAGTTCAATAAGTTTGGAGCGGACGTATGAAGGTTAGGATTGAAACACCATCATCCTTGAAGTTGAAAGTACATAGATATGGATATCTTAACCATTAAAACTCTACTCTTCTTCTTCGACTTTTATTTTCATGTAATTTGGGCAAGCTATTATGAAATAAAACTAATGTTGTTGTACGTGTTTACTTATATTTACCAATATGTAAATGCATGTTGTTTATCAACATATTGATACAATACTTTAAATATTAATTGGTGTTAAATATATTTTGATACACTTATGTCTTATATAGACATATTTGTTGATTAATAATGATAAATACTCTCATATCTTATATATGATATATACTACCGAGACACCCTATATTGCTTTATGAAACTATTTATGTATATATGATCGATAATCGTCAACTTTACAAGCATCAACCTCGACGACTATCATGTTTTTGCATAGTGAAACCTAGAATATCTATACCAGATCCTGAAGGTATTTTTCACTTAGATCGTCACATGCACATCAGGAGCGTGTGCCCCTAGGAGAGGAAAAAACCTATATGGAGAGAAGAAGAAAAAAGATAGAGAAGAAGGTAAATAATAAAAGACTATAATTTGTTATATTTTCTCTAATAGTAATAATGCGAGAATCAAGGGAGAATTGATTGTTTTCATTTTTGTGGTTATGATTTCCATATTTGTTGCAATCAACAAGGACGATACTTTTCATTGGAACTAGTGAGGTTTGGACTCATATGTTCTTTTACAAATACAATGTCATAAAGTCGTTTCACTGTGATCAAGAACTAACTTGATCATCCGCAATCTCCTTATCCTCCTTTCAATATTCAATAACTATTGCAGAAGATATAATTTGTCACGCCCCGCTCCAAACAACTACTAAGCGATAAGCACAATACAATAATGCAGCGAAAATACATAAACATAACATCTTTTATTACTTGAACCAATGCTTTATACAATTACATTTTCCTTTCTTCCTTAGTACAAAGATAACAACTAGACTTAAACACGCCTGACTTAGTTCTCACAAAATTGATAAGATGTTCCCCTCTGCGTTCAAGACGTTTAAGAGTATAATTATTCCTTTATTACAAGGAAATACAATACAAAAGAACTAACTTTCTCAGCTTTCAAGCATAGTAACTCATCTTAACTTTCTCCACTTGTCCTCAACGCCTAAATATCTAACACTACAAGAATTTTGATTTTTGCCAATGTAGAAAAACGTTGACAGATCTTAAGAAAGATGTGAGCGGTGCTTCTGCTGACATTTTCTTTCTTTTTTTTTCTATGTGGGCATGCTTCATGGCGAAATCCCATTGTCTTTTTCTTTACCACATCTTGAATTAGAACATTTATTTAGTTACTTATTTTTAAACTTATAATCATGTCCATGTTAAAGATTTTAGGGGATCCATAAATAACTAAATCATTTCTTTTTATTCTTTAAAATTATTTTGATTTCTCGGTCTTAATTATTAATTAGTCTTTGGTTTTATCATCTGAAAAATTATAATTTTAACATGCATTTACGTAACACTATAATCTATAATCTTTAATTTACTTGAAAAAGTTACCAAATAAGTTAGTACTCTCAAGGGTTTAGTATTACTTTTACTTCCCCCACTACTAATTTCTCTCTCATTTAATTGAAAGTGTTAACCATTCTATATTAATTACGATAATCACTTTCTTTTAGAATATTAAAACTTAAGTATGTGATTACTATTCAAACATTTGACTTTCCTAAAACAGCCAATAATGAGTTTAATTAAGTAGCCATTATCTCATTTCAACCATTCAAAAACCACACTTAATTACTAGCAATTGG

mRNA sequence

ATGTCTTCCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGCATCTAGCCCAACCGCCAATTGCTCCCGCGATGTACGTGTATGTGCAAATGTACTTGATATTCTTAATCTATCCCTTGGCAATAACCTACGTCCATGTTGTCAATTGATTCAAGGGCTAGTAGCTGTTGAGGTTGATATTTGTATACACAATTGG

Coding sequence (CDS)

ATGTCTTCCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGCATCTAGCCCAACCGCCAATTGCTCCCGCGATGTACGTGTATGTGCAAATGTACTTGATATTCTTAATCTATCCCTTGGCAATAACCTACGTCCATGTTGTCAATTGATTCAAGGGCTAGTAGCTGTTGAGGTTGATATTTGTATACACAATTGG

Protein sequence

MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGNNLRPCCQLIQGLVAVEVDICIHNW

Homology

[Close]

BLAST of Chy6G125600 vs. ExPASy Swiss-Prot
Match: Q9ZSP6 (Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.5e-07
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 9  SLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN-NLRPCCQ 68
          SLALF  LNL+ F+           S+ T  C   +  CANVL++++L+LGN  ++PCC 
Sbjct: 6  SLALFVSLNLLFFTC---------TSATTGTCPIQISTCANVLNLVDLTLGNPPVKPCCS 65

Query: 69 LIQGLVAVEVDICI 82
          LIQGL  +E   C+
Sbjct: 66 LIQGLADLEAAACL 70

[Close]

BLAST of Chy6G125600 vs. ExPASy Swiss-Prot
Match: Q9S7I2 (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.2e-05
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 10 LALFFCLNLILFSSLAIAQPIVPASSPTANC---SRDVRVCANVLDILNLSLGN-NLRPC 69
          LALF  LNL+ F+           S+ T  C   S ++  C  VL++++L+LGN  ++PC
Sbjct: 7  LALFVSLNLLFFTY---------TSATTGTCPKNSIEIGTCVTVLNLVDLTLGNPPVKPC 66

Query: 70 CQLIQGLVAVEVDICI 82
          C LIQGL  +E  +C+
Sbjct: 67 CSLIQGLADLEAAVCL 73

[Close]

BLAST of Chy6G125600 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 29  PIVPASSP--TANCSRD---VRVCANVLD-ILNLSLGN-NLRPCCQLIQGLVAVEVDICI 82
           P++P  +P  + NC  D   + VCANVL  +LN+ LG  + +PCC LIQGLV ++  +C+
Sbjct: 86  PVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCL 145

[Close]

BLAST of Chy6G125600 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 29  PIVPASSP--TANCSRD---VRVCANVLD-ILNLSLGN-NLRPCCQLIQGLVAVEVDICI 82
           P+ P  +P  + NC  D   + VCANVL  +LN+ LG  + +PCC LIQGLV ++  IC+
Sbjct: 81  PVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICL 140

[Close]

BLAST of Chy6G125600 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.7e-04
Identity = 33/98 (33.67%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 4   SNKSFSLALFFCLNLILFSSLAIAQ----PIVPASSPT-----------ANCSRD---VR 63
           S  S S+ALFF LN++ F+ ++  +    P  P   PT             C RD   + 
Sbjct: 3   SKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALKLG 62

Query: 64  VCANVLDIL-NLSLGN-NLRPCCQLIQGLVAVEVDICI 82
           VCA+VL+++ N+ +G+    PCC L++GLV +E  +C+
Sbjct: 63  VCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCL 100

[Close]

BLAST of Chy6G125600 vs. ExPASy TrEMBL
Match: A0A0A0L1L8 (Hydrophob_seed domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G027190 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29
Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN 60
          MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPT NCSR+VRVCA+VL+I+NL++G 
Sbjct: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTPNCSRNVRVCASVLNIVNLTIGQ 60

Query: 61 NLRPCCQLIQGLVAVEVDICI 82
          NL PCCQLIQGL A EVDICI
Sbjct: 61 NLGPCCQLIQGLAAAEVDICI 81

[Close]

BLAST of Chy6G125600 vs. ExPASy TrEMBL
Match: A0A0A0L4B3 (Hydrophob_seed domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026690 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN 60
          MSSS+KSFSLALFFCLNLILFSSLAIAQPIVP SSPT NCS +V  CA+V+  + +S G+
Sbjct: 1  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60

Query: 61 N--LRPCCQLIQGLVAVEVDICIH 83
             +RPCC LIQGLVA    IC++
Sbjct: 61 QEPVRPCCDLIQGLVATNAKICLN 84

[Close]

BLAST of Chy6G125600 vs. ExPASy TrEMBL
Match: A0A5D3CKE8 (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00110 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPT---ANCS-RDVRVCANVLDILNL 60
          MSS NK FSLALF+CL   LFSSLAIAQPIVPA SPT   ANCS R+V +CA VL+ +N+
Sbjct: 1  MSSCNKPFSLALFYCL-CFLFSSLAIAQPIVPAPSPTTGGANCSLRNVVLCATVLNYVNV 60

Query: 61 SLGNN---LRPCCQLIQGLVAVEVDICI 82
          ++G+N   +RPCC +I+GLVAVE  +CI
Sbjct: 61 NIGSNNQAIRPCCDMIRGLVAVEAGMCI 87

[Close]

BLAST of Chy6G125600 vs. ExPASy TrEMBL
Match: A0A5D3CLJ3 (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00160 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-06
Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPAS-----SPT------ANCSR---DVRV 60
          M SSNK+  LALFF LNL+ FS +   QP+ P +     SPT      A C R   ++  
Sbjct: 1  MYSSNKTSPLALFFFLNLLFFSLVTSHQPVQPPNPVQPPSPTPPTNNGATCPRNTLNIAA 60

Query: 61 CANVLD---ILNLSLGNNLRPCCQLIQGLVAVEVDICI 82
          CANVL+   +LN     +  PCC LIQGL  +E  +C+
Sbjct: 61 CANVLNLVSLLNNQPNQSYPPCCSLIQGLADLEARVCL 98

[Close]

BLAST of Chy6G125600 vs. ExPASy TrEMBL
Match: A0A6P6A5B7 (14 kDa proline-rich protein DC2.15-like isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111306290 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-06
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 3  SSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTAN------------CSRD---VRVC 62
          +S KS SLALFF LN ILF SL  A+   P+  P  N            C RD   + VC
Sbjct: 2  ASKKSASLALFFALN-ILFFSLVSARASCPSPKPKPNPTPSPSPSGGGKCPRDALKLGVC 61

Query: 63 ANVLDILNLSLGN-NLRPCCQLIQGLVAVEVDICI 82
          A+VL ++N+++G+  ++PCC LIQGL  +E  +C+
Sbjct: 62 ADVLGLVNVTIGSPPVQPCCSLIQGLADLEAAVCL 95

[Close]

BLAST of Chy6G125600 vs. NCBI nr
Match: XP_011652719.2 (putative lipid-binding protein AIR1B [Cucumis sativus] >KGN55893.2 hypothetical protein Csa_010099 [Cucumis sativus])

HSP 1 Score: 138 bits (347), Expect = 4.77e-40
Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN 60
          MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPT NCSR+VRVCA+VL+I+NL++G 
Sbjct: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTPNCSRNVRVCASVLNIVNLTIGQ 60

Query: 61 NLRPCCQLIQGLVAVEVDICIHN 83
          NL PCCQLIQGL A EVDICI  
Sbjct: 61 NLGPCCQLIQGLAAAEVDICIQT 83

[Close]

BLAST of Chy6G125600 vs. NCBI nr
Match: KGN55884.1 (hypothetical protein Csa_009554 [Cucumis sativus])

HSP 1 Score: 109 bits (272), Expect = 1.11e-28
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN 60
          MSSS+KSFSLALFFCLNLILFSSLAIAQPIVP SSPT NCS +V  CA+V+  + +S G+
Sbjct: 1  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60

Query: 61 N--LRPCCQLIQGLVAVEVDICIH 82
             +RPCC LIQGLVA    IC++
Sbjct: 61 QEPVRPCCDLIQGLVATNAKICLN 84

[Close]

BLAST of Chy6G125600 vs. NCBI nr
Match: TYK12005.1 (14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 3.69e-23
Identity = 56/90 (62.22%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPT---ANCS-RDVRVCANVLDILNL 60
          MSS NK FSLALF+CL   LFSSLAIAQPIVPA SPT   ANCS R+V +CA VL+ +N+
Sbjct: 1  MSSCNKPFSLALFYCL-CFLFSSLAIAQPIVPAPSPTTGGANCSLRNVVLCATVLNYVNV 60

Query: 61 SLGNN---LRPCCQLIQGLVAVEVDICIHN 83
          ++G+N   +RPCC +I+GLVAVE  +CI +
Sbjct: 61 NIGSNNQAIRPCCDMIRGLVAVEAGMCISS 89

[Close]

BLAST of Chy6G125600 vs. NCBI nr
Match: KAG6577623.1 (putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.5 bits (184), Expect = 2.89e-15
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 2  SSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPT-ANCSRD---VRVCANVLDILNLS 61
          SS   S  LALF CLNL+ F SL  AQP+VP  SP+  +C R    VRVCA VL  L++ 
Sbjct: 3  SSKKPSSLLALFLCLNLLFF-SLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGVLRFLSIG 62

Query: 62 LGNNLRPCCQLIQGLVAVEVDICI 81
          LG+N+ PCC +IQGL AV+   C+
Sbjct: 63 LGSNVGPCCSMIQGLTAVQAAACV 85

[Close]

BLAST of Chy6G125600 vs. NCBI nr
Match: KAG7015665.1 (putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.2 bits (152), Expect = 1.62e-10
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 2  SSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPT-ANCSRD---VRVCANVLDILNLS 61
          SS   S  LALF CLNL+ F SL  AQP+VP  SP+  +C R    VRVCA         
Sbjct: 3  SSKKPSSLLALFLCLNLLFF-SLVTAQPMVPPPSPSPTSCPRGLVPVRVCAG-------- 62

Query: 62 LGNNLRPCCQLIQGLVAVEVDICI 81
          LG+N+ PCC +IQGL AV+   C+
Sbjct: 63 LGSNVGPCCSMIQGLTAVQAAACV 77

[Close]

BLAST of Chy6G125600 vs. TAIR 10
Match: AT4G12545.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 9  SLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN-NLRPCCQ 68
          SLALF  LNL+ F+           S+ T  C   +  CANVL++++L+LGN  ++PCC 
Sbjct: 6  SLALFVSLNLLFFTC---------TSATTGTCPIQISTCANVLNLVDLTLGNPPVKPCCS 65

Query: 69 LIQGLVAVEVDICI 82
          LIQGL  +E   C+
Sbjct: 66 LIQGLADLEAAACL 70

[Close]

BLAST of Chy6G125600 vs. TAIR 10
Match: AT1G12090.1 (extensin-like protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 7   SFSLALFFCLNLILFSSLAIA-------------------QPIVPASSPTANCSRD---V 66
           S S+ALF  LNL+ F++++                     +P    SS ++ C +D   +
Sbjct: 3   SSSIALFLALNLLFFTTISACGSCTPCGGGCPSPKPKPTPKPTPSPSSGSSKCPKDTLKL 62

Query: 67  RVCANVLD-ILNLSLGN-NLRPCCQLIQGLVAVEVDICI 82
            VCANVL+ +L+L+LG   + PCC LIQGL  VE  +C+
Sbjct: 63  GVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCL 101

[Close]

BLAST of Chy6G125600 vs. TAIR 10
Match: AT4G12550.1 (Auxin-Induced in Root cultures 1 )

HSP 1 Score: 48.5 bits (114), Expect = 3.0e-06
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 10 LALFFCLNLILFSSLAIAQPIVPASSPTANC---SRDVRVCANVLDILNLSLGN-NLRPC 69
          LALF  LNL+ F+           S+ T  C   S ++  C  VL++++L+LGN  ++PC
Sbjct: 7  LALFVSLNLLFFTY---------TSATTGTCPKNSIEIGTCVTVLNLVDLTLGNPPVKPC 66

Query: 70 CQLIQGLVAVEVDICI 82
          C LIQGL  +E  +C+
Sbjct: 67 CSLIQGLADLEAAVCL 73

[Close]

BLAST of Chy6G125600 vs. TAIR 10
Match: AT4G22610.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 6.7e-06
Identity = 31/81 (38.27%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 1  MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTANCSRDVRVCANVLDILNLSLGN 60
          M+S N   + A F  +NLILF    +AQP      PT  C RD+  C+NV  +  +    
Sbjct: 1  MASKN---TTAFFLTINLILF-GFTVAQP------PT--CPRDIEACSNVFGLGRILNYQ 60

Query: 61 NLRPCCQLIQGLVAVEVDICI 82
           +RPCC L+ GL A    +CI
Sbjct: 61 TVRPCCTLVDGLDAYVASVCI 69

[Close]

BLAST of Chy6G125600 vs. TAIR 10
Match: AT5G46900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 8.8e-06
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 28 QPIVPASSPTANCSRDVRVCANVLDILNLSLGNNLRPCCQLIQGLVAVEVDICI 82
          +P  P+  PT   +  ++VCANVLD++ +SL      CC LI+GLV +E  +C+
Sbjct: 38 KPATPSPKPTCKDALKLKVCANVLDLVKVSLPPTSN-CCALIKGLVDLEAAVCL 90

The following BLAST results are available for this feature:

BLAST of Chy6G125600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSP6	3.5e-07	41.89	Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE...	[more]
Q9S7I2	4.2e-05	38.16	Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2...	[more]
Q9SU34	1.6e-04	43.33	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]
Q9SU33	1.6e-04	45.00	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]
P14009	2.7e-04	33.67	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]

BLAST of Chy6G125600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1L8	1.2e-29	86.42	Hydrophob_seed domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G027...	[more]
A0A0A0L4B3	3.4e-21	67.86	Hydrophob_seed domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026...	[more]
A0A5D3CKE8	1.1e-16	63.64	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CLJ3	6.8e-06	41.84	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6P6A5B7	6.8e-06	42.11	14 kDa proline-rich protein DC2.15-like isoform X1 OS=Durio zibethinus OX=66656 ...	[more]

BLAST of Chy6G125600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652719.2	4.77e-40	84.34	putative lipid-binding protein AIR1B [Cucumis sativus] >KGN55893.2 hypothetical ...	[more]
KGN55884.1	1.11e-28	67.86	hypothetical protein Csa_009554 [Cucumis sativus]	[more]
TYK12005.1	3.69e-23	62.22	14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa]	[more]
KAG6577623.1	2.89e-15	52.38	putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. sor...	[more]
KAG7015665.1	1.62e-10	48.81	putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of Chy6G125600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12545.1	2.5e-08	41.89	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G12090.1	1.8e-06	35.35	extensin-like protein	[more]
AT4G12550.1	3.0e-06	38.16	Auxin-Induced in Root cultures 1	[more]
AT4G22610.1	6.7e-06	38.27	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G46900.1	8.8e-06	40.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027923	Hydrophobic seed protein domain	PFAM	PF14547	Hydrophob_seed	coord: 42..81 e-value: 9.2E-7 score: 29.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 33..83 e-value: 3.1E-6 score: 28.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 43..81
None	No IPR available	PANTHER	PTHR31731:SF82	HYPRP2	coord: 5..81
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 5..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G125600.1	Chy6G125600.1	mRNA