Chy6G124950 (gene) Cucumber (hystrix) v1

Overview
NameChy6G124950
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionBis(5'-adenosyl)-triphosphatase-like
LocationchrH06: 23700182 .. 23701591 (+)
RNA-Seq ExpressionChy6G124950
SyntenyChy6G124950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAAATGATAGAGAATTATCAAAGCAACATATTGATTTGGAAGAGGAGAGGAAGGACAGAGGGTTTGAGGAGATGAAAGAAGAAGCTGATCACTACACAAAGCTTTTCTTCAAGACATTATTATTGTATTACTTTATGTGATTAATTAGGTTTGTGAGTTTGGTTGGTTGTGTCACTTTTAAATAACATCAAATTTATGTATATATTATTATAGACGATATATGTCAATAAAGTATCGATATCCGTCATCGTTTTATCTCGTTGTAGGTATTTATACAATATGTTAGTGATGTTGGTTGATGATGTCAACATTAACTCTTTAAATTTACAATTGTATCACTATATTTTAAAGGGTTTTTTTCAAATATAGTGAAATATCATTGTATATTTACGATGAACCATGGTAGCAACTACTATATGTGTTTATTTGTATCATGATAAATATAGTAGTCGATTTTGAACCATTGATCACATATAAATTGTGATATTGTCATTAAAATTATAAATGAATATTTTCATTCTAAAACAAGTATACAAAGTCATAAACATTTCAATAGATATCTAAAATGAACTTTTAACATCTTAGAATGAAAACATTTTGCTATGTATTTTGTTATTGTTTTTAAGTGTAATAAAAGCTAAACAAAAATTTGTTATTATTTTGATTTAAAAAAAAAGCTAAACAAGAAGGAAACATCTATAGAAAGGAAGCAATACTTAACGTCTAATGGTCTCGGAGACCTAAAGAGAATGATTTTTAAGCTAAATTTTTTTTCAATAAAAGCATGAGTAGTAGCAACATTATAGGAAATTCTTGGAATATGATGAAAGTCGTTAGATTTTTATCTATCAATTTAATCATAAACTTGAATAAACGTCAATTTAATGTATGAGGTTTACAACTTGTATCTATTTAGATTCTATTATAGAAATATACTATTTAAAATTAATAAAATTTCTTACCCATATAGATTCATAAACTAACTAAAGATCAAGTTTGTTTATAACTTTTTCATTATAAAATAAAAACTAATGATTAAATTTGATAACATTTTTTACTAGATTAAAATTATTAAGTGAGATTGTTAAAAAAAAAGACTTACCTCAAATTAATTATTATTGTCGATTACGTTTTATTATATTTATAAATATTTTTAGAAGTTATATCATTTAAAATAATTTTAAAAAATCTATTATTTTCATTATTTCAAAGATATATTTTTAATCGCTGATAATATAGATATTGATAGAAGTCTACTCAAAAATACAAATCATAAATGTATTATTGATAGTGTTATACATATTCATTATTGTCTTCTTGAGATGGCATTTCAATTTGCCACACTTCCGCTGGCTAATTTTACTGTCTTCCAAACCCGCTTCCCTTCCGACGTTCTGAGGTAG

mRNA sequence

ATGAATGAAAATGATAGAGAATTATCAAAGCAACATATTGATTTGGAAGAGGAGAGGAAGGACAGAGGGTTTGAGGAGATGAAAGAAGAAGCTGATCACTACACAAAGCTTTTCTTCAAGACATTATTATTACGATATATGTCAATAAAGTATCGATATCCGTCATCGTTTTATCTCGTTGTAGATATTGATAGAAGTCTACTCAAAAATACAAATCATAAATGTATTATTGATAGTGTTATACATATTCATTATTGTCTTCTTGAGATGGCATTTCAATTTGCCACACTTCCGCTGGCTAATTTTACTGTCTTCCAAACCCGCTTCCCTTCCGACGTTCTGAGGTAG

Coding sequence (CDS)

ATGAATGAAAATGATAGAGAATTATCAAAGCAACATATTGATTTGGAAGAGGAGAGGAAGGACAGAGGGTTTGAGGAGATGAAAGAAGAAGCTGATCACTACACAAAGCTTTTCTTCAAGACATTATTATTACGATATATGTCAATAAAGTATCGATATCCGTCATCGTTTTATCTCGTTGTAGATATTGATAGAAGTCTACTCAAAAATACAAATCATAAATGTATTATTGATAGTGTTATACATATTCATTATTGTCTTCTTGAGATGGCATTTCAATTTGCCACACTTCCGCTGGCTAATTTTACTGTCTTCCAAACCCGCTTCCCTTCCGACGTTCTGAGGTAG

Protein sequence

MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLFFKTLLLRYMSIKYRYPSSFYLVVDIDRSLLKNTNHKCIIDSVIHIHYCLLEMAFQFATLPLANFTVFQTRFPSDVLR*
Homology
[Close]
BLAST of Chy6G124950 vs. ExPASy TrEMBL
Match: A0A0A0L1W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038770 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 70  NTNHKCIIDSVIHIHYCLLEMAFQFATLPLANFTVFQTRFPSDVL 115
           NTNHKCIID VIH  YCLLE+AFQFATLPL  FTVF+TRFPSD L
Sbjct: 2   NTNHKCIIDIVIHFRYCLLEIAFQFATLPLPTFTVFETRFPSDAL 46

[Close]
BLAST of Chy6G124950 vs. ExPASy TrEMBL
Match: A0A5D3D779 (Bis(5'-adenosyl)-triphosphatase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00870 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.0e-08
Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLF 39
           MNENDRELSKQHIDLEEERKDRGFEEMKEEA  YTKLF
Sbjct: 75  MNENDRELSKQHIDLEEERKDRGFEEMKEEALQYTKLF 112

[Close]
BLAST of Chy6G124950 vs. ExPASy TrEMBL
Match: A0A1S3BLV5 (bis(5'-adenosyl)-triphosphatase-like OS=Cucumis melo OX=3656 GN=LOC103490973 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.7e-08
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKL 38
           MNENDRELSKQHIDLEEERKDRGFEEMKEEA  YTKL
Sbjct: 75  MNENDRELSKQHIDLEEERKDRGFEEMKEEALQYTKL 111

[Close]
BLAST of Chy6G124950 vs. ExPASy TrEMBL
Match: A0A6J1DEY2 (Bis(5'-adenosyl)-triphosphatase OS=Momordica charantia OX=3673 GN=LOC111020419 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.1e-04
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLFF 40
           M+ENDR + KQHIDL+E+RKDR FEEM +EAD YT+LFF
Sbjct: 119 MDENDR-VMKQHIDLDEKRKDRSFEEMAQEADQYTRLFF 156

[Close]
BLAST of Chy6G124950 vs. ExPASy TrEMBL
Match: A0A6J1DIT4 (Bis(5'-adenosyl)-triphosphatase OS=Momordica charantia OX=3673 GN=LOC111020419 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.1e-04
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLFF 40
           M+ENDR + KQHIDL+E+RKDR FEEM +EAD YT+LFF
Sbjct: 123 MDENDR-VMKQHIDLDEKRKDRSFEEMAQEADQYTRLFF 160

[Close]
BLAST of Chy6G124950 vs. NCBI nr
Match: XP_031737986.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.63e-13
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLFF 39
           MNENDRELSKQHID+EEERKDRGFEEMKEEA HYTKLFF
Sbjct: 122 MNENDRELSKQHIDMEEERKDRGFEEMKEEAHHYTKLFF 160

[Close]
BLAST of Chy6G124950 vs. NCBI nr
Match: TYK19436.1 (bis(5'-adenosyl)-triphosphatase-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 1.14e-11
Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLF 38
           MNENDRELSKQHIDLEEERKDRGFEEMKEEA  YTKLF
Sbjct: 75  MNENDRELSKQHIDLEEERKDRGFEEMKEEALQYTKLF 112

[Close]
BLAST of Chy6G124950 vs. NCBI nr
Match: XP_008448961.1 (PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 6.41e-11
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKL 37
           MNENDRELSKQHIDLEEERKDRGFEEMKEEA  YTKL
Sbjct: 75  MNENDRELSKQHIDLEEERKDRGFEEMKEEALQYTKL 111

[Close]
BLAST of Chy6G124950 vs. NCBI nr
Match: XP_038903515.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [Benincasa hispida] >XP_038903516.1 bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [Benincasa hispida])

HSP 1 Score: 55.1 bits (131), Expect = 1.62e-06
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLFF 39
           +NENDR L  QHIDL+E+R DRGFEEMK+EAD YTKLFF
Sbjct: 122 VNENDRALH-QHIDLDEKRPDRGFEEMKQEADEYTKLFF 159

[Close]
BLAST of Chy6G124950 vs. NCBI nr
Match: KAG6596806.1 (Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 52.8 bits (125), Expect = 1.14e-05
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 1   MNENDRELSKQHIDLEEERKDRGFEEMKEEADHYTKLFF 39
           M+ENDR L K HIDL+E+R DRGFEEM +EAD YTKLFF
Sbjct: 118 MDENDRALKK-HIDLDEKRMDRGFEEMAQEADEYTKLFF 155

The following BLAST results are available for this feature:
BLAST of Chy6G124950 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G124950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1W01.8e-1282.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038770 PE=4 SV=1[more]
A0A5D3D7792.0e-0894.74Bis(5'-adenosyl)-triphosphatase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3BLV57.7e-0894.59bis(5'-adenosyl)-triphosphatase-like OS=Cucumis melo OX=3656 GN=LOC103490973 PE=... [more]
A0A6J1DEY25.1e-0471.79Bis(5'-adenosyl)-triphosphatase OS=Momordica charantia OX=3673 GN=LOC111020419 P... [more]
A0A6J1DIT45.1e-0471.79Bis(5'-adenosyl)-triphosphatase OS=Momordica charantia OX=3673 GN=LOC111020419 P... [more]
BLAST of Chy6G124950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031737986.12.63e-1394.87bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucumis sat... [more]
TYK19436.11.14e-1194.74bis(5'-adenosyl)-triphosphatase-like [Cucumis melo var. makuwa][more]
XP_008448961.16.41e-1194.59PREDICTED: bis(5'-adenosyl)-triphosphatase-like [Cucumis melo][more]
XP_038903515.11.62e-0676.92bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [Beninc... [more]
KAG6596806.11.14e-0574.36Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT, partial [Cu... [more]
BLAST of Chy6G124950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G124950.1Chy6G124950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0047627 adenylylsulfatase activity
molecular_function GO:0047710 bis(5'-adenosyl)-triphosphatase activity
molecular_function GO:0000166 nucleotide binding