Chy6G124920 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G124920
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	scarecrow-like protein 18
Location	chrH06: 23644163 .. 23645616 (+)
RNA-Seq Expression	Chy6G124920
Synteny	Chy6G124920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATGTTTTGGATTTCGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCTTCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCCCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCCGCTCTTACCCTCTTCCCTGATGAAGCTCTCGCCGTTAACTGCGTACTCTACTTGCACAGGTACGGTATACTTTAAATCATTTATTGACTTAAAAGTTTTACACCTCTGTATAGAAAGTTGGTGTAGATGGTATAAACGGATCGAGGTTATTAGATTTGTTGCCTTGAGTTTGAAAGGTAGAGAAATTTTTCATGGAAAATCATACGTTTCTAGTTACATGAGTTATTAAGTTAACCCATGTATAAACTTTAATAATGTTAATTAGTACGAAGTTCGAGAGCATGAATGAGATAATACAAATTCATTGATGAAGAAACATCTTATGATCTCATGTTTCGAACTACTACTAAACTCAAAGCTTAAGTTTACACGAGAAATGTAGATTTGTAGACTGTTTGAGTTTGAATGGTGGGGGGTTTTCTTGGAAAATCGTATTTTTAGCCAAGAATGTGTATAAGTTCCAAAGTTAATTCAATGTTAAAACATTAATGTTAGTTGGAAAGGAAATGATGTCATCAATGTAACAAATGGATTGAGGAAGAATAATGTTTTTGAACCACCACTAAACTCAAGAGCTTAAATTTACTCAACTTTATAGATTTTTCTTAGCATGCACTAGCCTTTAGGTGGTGGATATTAGTATAAGGTCAAATGAGTGGTTTATGGTAGAGTTAGATTTGGAGTATTTGACTTAATTAACCATTAATGAAGCTGATAGGTTACGATAAATTTACAGGTTAATGAAGGACGATGTTCGAGTATTGCTCAATAAAATCAAGGCTTTGAATCCAAAAGTGGTGACAATAGCTGAAAAGGAAGCAAATTTCAACCATCCATTATTCATGCAAAGATTTGTAGAGGCATTGAATCATTACACTTTATTATTTGATTCATTAGAAGCAACTTTACCTCCAAACAGTAGGGAGAGATTGGCAGTGGAGCAAGTTTGGTTTGGGAGGGAAATAAGCGACATCGTTTCAGGAGAAGTGAATAAGAAAAAACAACACTATGCTGATAGGTATGAATCATGGGAAACAATGCTTAAAAGTTTAGGATTTTCTAATATTCCTTTAAGCCCTTTTGCTCTTTCACAAGCTAAACTCCTTCTAAGACTTCATTATCCTTCTGAAGGTTATCATCTCCAAATCCTTCATGATTCCCTTTTTCTTGGTTGGCAAAATCAACCCCTCTTTTCAGTCTCTTCATGGCATTGA

mRNA sequence

ATGATTCATGTTTTGGATTTCGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCTTCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCCCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCCGCTCTTACCCTCTTCCCTGATGAAGCTCTCGCCGTTAACTGCGTACTCTACTTGCACAGGTTAATGAAGGACGATGTTCGAGTATTGCTCAATAAAATCAAGGCTTTGAATCCAAAAGTGGTGACAATAGCTGAAAAGGAAGCAAATTTCAACCATCCATTATTCATGCAAAGATTTGTAGAGGCATTGAATCATTACACTTTATTATTTGATTCATTAGAAGCAACTTTACCTCCAAACAGTAGGGAGAGATTGGCAGTGGAGCAAGTTTGGTTTGGGAGGGAAATAAGCGACATCGTTTCAGGAGAAGTGAATAAGAAAAAACAACACTATGCTGATAGGTATGAATCATGGGAAACAATGCTTAAAAGTTTAGGATTTTCTAATATTCCTTTAAGCCCTTTTGCTCTTTCACAAGCTAAACTCCTTCTAAGACTTCATTATCCTTCTGAAGGTTATCATCTCCAAATCCTTCATGATTCCCTTTTTCTTGGTTGGCAAAATCAACCCCTCTTTTCAGTCTCTTCATGGCATTGA

Coding sequence (CDS)

ATGATTCATGTTTTGGATTTCGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCTTCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCCCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCCGCTCTTACCCTCTTCCCTGATGAAGCTCTCGCCGTTAACTGCGTACTCTACTTGCACAGGTTAATGAAGGACGATGTTCGAGTATTGCTCAATAAAATCAAGGCTTTGAATCCAAAAGTGGTGACAATAGCTGAAAAGGAAGCAAATTTCAACCATCCATTATTCATGCAAAGATTTGTAGAGGCATTGAATCATTACACTTTATTATTTGATTCATTAGAAGCAACTTTACCTCCAAACAGTAGGGAGAGATTGGCAGTGGAGCAAGTTTGGTTTGGGAGGGAAATAAGCGACATCGTTTCAGGAGAAGTGAATAAGAAAAAACAACACTATGCTGATAGGTATGAATCATGGGAAACAATGCTTAAAAGTTTAGGATTTTCTAATATTCCTTTAAGCCCTTTTGCTCTTTCACAAGCTAAACTCCTTCTAAGACTTCATTATCCTTCTGAAGGTTATCATCTCCAAATCCTTCATGATTCCCTTTTTCTTGGTTGGCAAAATCAACCCCTCTTTTCAGTCTCTTCATGGCATTGA

Protein sequence

MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQPLFSVSSWH*

Homology

[Close]

BLAST of Chy6G124920 vs. ExPASy Swiss-Prot
Match: Q9ZWC5 (Scarecrow-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=SCL18 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 9.5e-80
Identity = 149/267 (55.81%), Postives = 196/267 (73.41%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-----FPSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           +H+LD DI  G+QWPPLMQALA+R      P P LRIT  G D+  L++TGDRL++FA S
Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADS 238

Query: 62  LGLRFQFHPLLLLHDRDHHRVIP---AALTLFPDEALAVNCVLYLHRLMKDD---VRVLL 121
           LGL+FQFH L+++ +     ++     AL+    E +AVNCV +LH++  DD   +   L
Sbjct: 239 LGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFL 298

Query: 122 NKIKALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQV 181
           + IK+LN ++VT+AE+EAN     F+ RF EA++HY  +FDSLEATLPPNSRERL +EQ 
Sbjct: 299 SAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQR 358

Query: 182 WFGREISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPS 241
           WFG+EI D+V+ E  ++KQ +  R+E WE M+K  GF N+P+  FALSQAKLLLRLHYPS
Sbjct: 359 WFGKEILDVVAAEETERKQRHR-RFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPS 418

Query: 242 EGYHLQILHDSLFLGWQNQPLFSVSSW 258
           EGY+LQ L++SLFLGWQN+PLFSVSSW
Sbjct: 419 EGYNLQFLNNSLFLGWQNRPLFSVSSW 444

[Close]

BLAST of Chy6G124920 vs. ExPASy Swiss-Prot
Match: Q84MM9 (Protein MONOCULM 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOC1 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-54
Identity = 127/283 (44.88%), Postives = 167/283 (59.01%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR----FPSPMLRITATGLDLNFLHKTGDRLSKFAQSL 61
           +H+LD D +HGVQWPPL+QA+A+R       P +R+T  G D + L +TG+RL  FA+S+
Sbjct: 158 VHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSI 217

Query: 62  GLRFQFHPLLL--LHDRDHH--------------RVIPAALTLFPDEALAVNCVLYLHRL 121
            L F F PLLL       HH                    L   PDE LAVNCV++LH L
Sbjct: 218 HLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNL 277

Query: 122 M-KDDVRVLLNKIKALNPKVVTIAEKEA-----NFNHPLFMQRFV-EALNHYTLLFDSLE 181
              D++   L  +KA++P VVTIAE+EA       +H   + R V  A++HY+ +F++LE
Sbjct: 278 AGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALE 337

Query: 182 ATLPPNSRERLAVEQVWFGREISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSP 241
           AT+PP SRERLAVEQ   GREI       V      +    E W    ++ GF+  PLS 
Sbjct: 338 ATVPPGSRERLAVEQEVLGREI----EAAVGPSGGRWWRGIERWGGAARAAGFAARPLSA 397

Query: 242 FALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQPLFSVSSW 258
           FA+SQA+LLLRLHYPSEGY +Q    + FLGWQ +PL SVS+W
Sbjct: 398 FAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAW 436

[Close]

BLAST of Chy6G124920 vs. ExPASy Swiss-Prot
Match: A0A145P7T2 (GRAS family protein RAM1 OS=Lotus japonicus OX=34305 GN=RAM1 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.8e-45
Identity = 103/257 (40.08%), Postives = 155/257 (60.31%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-FPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +HV+D DI+ G QWP  MQALA R   +P LRIT  G  ++ + +TG  L++ A SL + 
Sbjct: 441 VHVIDLDILQGYQWPTFMQALAARPGGAPFLRITGVGPCIDSVRETGRCLTELAHSLRIP 500

Query: 62  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 121
           F+FHP+          + P        EALAVN V  LHR+    +  LL+ I+   P +
Sbjct: 501 FEFHPV----GEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGSHLGNLLSMIRDQAPNI 560

Query: 122 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 181
           VT+ E+EA+ N P F+ RF+EAL++Y+ +FDSL+AT PP S +R  VEQ  F  EI +IV
Sbjct: 561 VTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIV 620

Query: 182 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 241
           + E  ++ + + +R E W  +++  GF  + LSP A++Q+++LL L Y  +GY L     
Sbjct: 621 ACEGAERIERH-ERLEKWRKIMEGKGFRGVALSPNAVTQSRILLGL-YSCDGYRLTEDKG 680

Query: 242 SLFLGWQNQPLFSVSSW 258
            L LGWQ++ + + S+W
Sbjct: 681 CLLLGWQDRAIIAASAW 691

[Close]

BLAST of Chy6G124920 vs. ExPASy Swiss-Prot
Match: G7L166 (GRAS family protein RAM1 OS=Medicago truncatula OX=3880 GN=RAM1 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.6e-45
Identity = 103/257 (40.08%), Postives = 154/257 (59.92%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-FPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +HV+D DI+ G QWP  MQALA R   +P LRIT  G  +  + +TG  L++ A SL + 
Sbjct: 422 VHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIP 481

Query: 62  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 121
           F+FHP+          + P        EALAVN V  LHR+  + +  LL+ I+   P +
Sbjct: 482 FEFHPV----GEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNI 541

Query: 122 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 181
           VT+ E+EA+ N P F+ RF+EAL++Y+ +FDSL+AT P  S  R  VEQ  F  EI +IV
Sbjct: 542 VTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIV 601

Query: 182 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 241
           + E  ++ + + +R E W  +++  GF  +PLSP A++Q+++LL L Y  +GY L     
Sbjct: 602 ACEGEERIERH-ERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGL-YSCDGYRLTEDKG 661

Query: 242 SLFLGWQNQPLFSVSSW 258
            L LGWQ++ + + S+W
Sbjct: 662 CLLLGWQDRAIIAASAW 672

[Close]

BLAST of Chy6G124920 vs. ExPASy Swiss-Prot
Match: A0A0M4FMK2 (GRAS family protein RAM1 OS=Petunia hybrida OX=4102 GN=RAM1 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.3e-43
Identity = 102/257 (39.69%), Postives = 151/257 (58.75%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-FPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +H++D DI+ G QWP  MQALA R   +P LRIT  G     + +TG  L++ A SL + 
Sbjct: 443 VHIIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPSPEAVRETGRCLTELAHSLHVP 502

Query: 62  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 121
           F+FHP+          + P        EALAVN V  LHR+  + +  LL  I+   P +
Sbjct: 503 FEFHPV----GEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPVNCIGNLLAMIRDQAPNI 562

Query: 122 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 181
           VTI E+EA+ N P F+ RF+EAL++Y+ +FDSL+AT P +S +R  +EQ  F  EI +IV
Sbjct: 563 VTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSSQRAKLEQYIFAPEIMNIV 622

Query: 182 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 241
           S E  ++   + +R E W  +++  GF  + LS  A++Q+K+LL L Y  +GY L     
Sbjct: 623 SCEGPERVVRH-ERLEKWRRLMEGKGFKGVALSANAVTQSKILLGL-YSCDGYKLTEDDG 682

Query: 242 SLFLGWQNQPLFSVSSW 258
            L LGWQ++ + + S+W
Sbjct: 683 CLLLGWQDRAILAASAW 693

[Close]

BLAST of Chy6G124920 vs. ExPASy TrEMBL
Match: A0A0A0L4J7 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G039300 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.0e-146
Identity = 255/258 (98.84%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLSKFAQSLGLR
Sbjct: 131 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSKFAQSLGLR 190

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV
Sbjct: 191 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 250

Query: 121 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 180
           VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREI+DIV
Sbjct: 251 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREINDIV 310

Query: 181 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 240
           SGEVNKKKQHYA+RYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD
Sbjct: 311 SGEVNKKKQHYAERYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 370

Query: 241 SLFLGWQNQPLFSVSSWH 259
           SLFLGWQNQPLFSVSSWH
Sbjct: 371 SLFLGWQNQPLFSVSSWH 388

[Close]

BLAST of Chy6G124920 vs. ExPASy TrEMBL
Match: G8XQN0 (GRAS protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 5.7e-144
Identity = 254/261 (97.32%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLS+FAQSLGLR
Sbjct: 133 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSRFAQSLGLR 192

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLH---RLMKDDVRVLLNKIKALN 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLH   RLMKDDVRVLLNKIKALN
Sbjct: 193 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRFYRLMKDDVRVLLNKIKALN 252

Query: 121 PKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREIS 180
           PKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREI+
Sbjct: 253 PKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREIN 312

Query: 181 DIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQI 240
           DIVSGEVNKKKQHYA+RYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQI
Sbjct: 313 DIVSGEVNKKKQHYAERYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQI 372

Query: 241 LHDSLFLGWQNQPLFSVSSWH 259
           LHDSLFLGWQNQPLFSVSSWH
Sbjct: 373 LHDSLFLGWQNQPLFSVSSWH 393

[Close]

BLAST of Chy6G124920 vs. ExPASy TrEMBL
Match: A0A1S3BLL3 (scarecrow-like protein 18 OS=Cucumis melo OX=3656 GN=LOC103490976 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.8e-143
Identity = 250/258 (96.90%), Postives = 254/258 (98.45%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR
Sbjct: 136 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 195

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKD+VR LLNKIKALNPKV
Sbjct: 196 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDEVRALLNKIKALNPKV 255

Query: 121 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 180
           VTIAEKEANFNHPLFMQRFVEALNHYT +FDSLEATLPPNSRERLAVEQVWFGREI+DIV
Sbjct: 256 VTIAEKEANFNHPLFMQRFVEALNHYTSIFDSLEATLPPNSRERLAVEQVWFGREINDIV 315

Query: 181 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 240
           SGE NKKKQHYA+RYESWE MLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD
Sbjct: 316 SGEANKKKQHYAERYESWEIMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 375

Query: 241 SLFLGWQNQPLFSVSSWH 259
           SLFLGWQNQPLFSVSSWH
Sbjct: 376 SLFLGWQNQPLFSVSSWH 393

[Close]

BLAST of Chy6G124920 vs. ExPASy TrEMBL
Match: A0A5D3D7C3 (Scarecrow-like protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00830 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 6.1e-138
Identity = 241/249 (96.79%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 10  MHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLL 69
           MHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLL
Sbjct: 1   MHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLL 60

Query: 70  HDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKVVTIAEKEAN 129
           HDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKD+VR LLNKIKALNPKVVTIAEKEAN
Sbjct: 61  HDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDEVRALLNKIKALNPKVVTIAEKEAN 120

Query: 130 FNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIVSGEVNKKKQ 189
           FNHPLFMQRFVEALNHYT +FDSLEATLPPNSRERLAVEQVWFGREI+DIVSGE NKKKQ
Sbjct: 121 FNHPLFMQRFVEALNHYTSIFDSLEATLPPNSRERLAVEQVWFGREINDIVSGEANKKKQ 180

Query: 190 HYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQ 249
           HYA+RYESWE MLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQ
Sbjct: 181 HYAERYESWEIMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQ 240

Query: 250 PLFSVSSWH 259
           PLFSVSSWH
Sbjct: 241 PLFSVSSWH 249

[Close]

BLAST of Chy6G124920 vs. ExPASy TrEMBL
Match: A0A6J1GFR5 (scarecrow-like protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453746 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.5e-131
Identity = 230/257 (89.49%), Postives = 247/257 (96.11%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRF 61
           IHV+DFDIMHGVQWPPLMQALA+RFPSPMLRI+A G DLNFLHKTGDRLSKFA SLGLRF
Sbjct: 138 IHVVDFDIMHGVQWPPLMQALAERFPSPMLRISAIGRDLNFLHKTGDRLSKFAHSLGLRF 197

Query: 62  QFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKVV 121
           QFHPLLLL+D DHHR+IPAALTLFPDEALA NCVLYLH+L+K+D+RVLL+KIKALNPKVV
Sbjct: 198 QFHPLLLLNDHDHHRLIPAALTLFPDEALAFNCVLYLHKLVKEDLRVLLHKIKALNPKVV 257

Query: 122 TIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIVS 181
           TIAEKEANFNHPLFMQRF+EALNHY+L+FDSLEATLPPNSRERLAVEQVWFGREI D+VS
Sbjct: 258 TIAEKEANFNHPLFMQRFLEALNHYSLIFDSLEATLPPNSRERLAVEQVWFGREIDDVVS 317

Query: 182 GEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDS 241
            E NK+KQ Y +RYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDS
Sbjct: 318 REGNKRKQRY-ERYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDS 377

Query: 242 LFLGWQNQPLFSVSSWH 259
           LFLGWQN+PLFSVSSWH
Sbjct: 378 LFLGWQNRPLFSVSSWH 393

[Close]

BLAST of Chy6G124920 vs. NCBI nr
Match: KAE8650085.1 (hypothetical protein Csa_009781 [Cucumis sativus])

HSP 1 Score: 522 bits (1345), Expect = 2.51e-185
Identity = 255/258 (98.84%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLSKFAQSLGLR
Sbjct: 106 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSKFAQSLGLR 165

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV
Sbjct: 166 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 225

Query: 121 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 180
           VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREI+DIV
Sbjct: 226 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREINDIV 285

Query: 181 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 240
           SGEVNKKKQHYA+RYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD
Sbjct: 286 SGEVNKKKQHYAERYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 345

Query: 241 SLFLGWQNQPLFSVSSWH 258
           SLFLGWQNQPLFSVSSWH
Sbjct: 346 SLFLGWQNQPLFSVSSWH 363

[Close]

BLAST of Chy6G124920 vs. NCBI nr
Match: NP_001295852.1 (scarecrow-like protein 18 [Cucumis sativus] >ACD13207.1 GRAS protein [Cucumis sativus])

HSP 1 Score: 516 bits (1328), Expect = 2.86e-182
Identity = 254/261 (97.32%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLS+FAQSLGLR
Sbjct: 133 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSRFAQSLGLR 192

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR---LMKDDVRVLLNKIKALN 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR   LMKDDVRVLLNKIKALN
Sbjct: 193 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRFYRLMKDDVRVLLNKIKALN 252

Query: 121 PKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREIS 180
           PKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREI+
Sbjct: 253 PKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREIN 312

Query: 181 DIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQI 240
           DIVSGEVNKKKQHYA+RYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQI
Sbjct: 313 DIVSGEVNKKKQHYAERYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQI 372

Query: 241 LHDSLFLGWQNQPLFSVSSWH 258
           LHDSLFLGWQNQPLFSVSSWH
Sbjct: 373 LHDSLFLGWQNQPLFSVSSWH 393

[Close]

BLAST of Chy6G124920 vs. NCBI nr
Match: XP_008448967.1 (PREDICTED: scarecrow-like protein 18 [Cucumis melo])

HSP 1 Score: 513 bits (1322), Expect = 2.35e-181
Identity = 250/258 (96.90%), Postives = 254/258 (98.45%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR
Sbjct: 136 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 195

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKV 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKD+VR LLNKIKALNPKV
Sbjct: 196 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDEVRALLNKIKALNPKV 255

Query: 121 VTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIV 180
           VTIAEKEANFNHPLFMQRFVEALNHYT +FDSLEATLPPNSRERLAVEQVWFGREI+DIV
Sbjct: 256 VTIAEKEANFNHPLFMQRFVEALNHYTSIFDSLEATLPPNSRERLAVEQVWFGREINDIV 315

Query: 181 SGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 240
           SGE NKKKQHYA+RYESWE MLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD
Sbjct: 316 SGEANKKKQHYAERYESWEIMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHD 375

Query: 241 SLFLGWQNQPLFSVSSWH 258
           SLFLGWQNQPLFSVSSWH
Sbjct: 376 SLFLGWQNQPLFSVSSWH 393

[Close]

BLAST of Chy6G124920 vs. NCBI nr
Match: TYK19432.1 (scarecrow-like protein 18 [Cucumis melo var. makuwa])

HSP 1 Score: 496 bits (1276), Expect = 1.29e-176
Identity = 241/249 (96.79%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 10  MHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLL 69
           MHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLL
Sbjct: 1   MHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLL 60

Query: 70  HDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKVVTIAEKEAN 129
           HDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKD+VR LLNKIKALNPKVVTIAEKEAN
Sbjct: 61  HDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDEVRALLNKIKALNPKVVTIAEKEAN 120

Query: 130 FNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIVSGEVNKKKQ 189
           FNHPLFMQRFVEALNHYT +FDSLEATLPPNSRERLAVEQVWFGREI+DIVSGE NKKKQ
Sbjct: 121 FNHPLFMQRFVEALNHYTSIFDSLEATLPPNSRERLAVEQVWFGREINDIVSGEANKKKQ 180

Query: 190 HYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQ 249
           HYA+RYESWE MLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQ
Sbjct: 181 HYAERYESWEIMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQ 240

Query: 250 PLFSVSSWH 258
           PLFSVSSWH
Sbjct: 241 PLFSVSSWH 249

[Close]

BLAST of Chy6G124920 vs. NCBI nr
Match: XP_038903029.1 (LOW QUALITY PROTEIN: scarecrow-like protein 18 [Benincasa hispida])

HSP 1 Score: 493 bits (1269), Expect = 4.65e-173
Identity = 245/264 (92.80%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR
Sbjct: 146 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 205

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRL------MKDDVRVLLNKIK 120
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRL      MKDD+RVLL+KIK
Sbjct: 206 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLRXIYRLMKDDIRVLLHKIK 265

Query: 121 ALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGR 180
           ALNPKVVTIAEKEANFN PLFMQRFVEALNHY+L+FDSLEATLPPNSRERLAVEQ WFGR
Sbjct: 266 ALNPKVVTIAEKEANFNQPLFMQRFVEALNHYSLIFDSLEATLPPNSRERLAVEQGWFGR 325

Query: 181 EISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYH 240
           EI+DIVSGE NK++QHY +RYESWE MLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYH
Sbjct: 326 EINDIVSGEGNKRRQHY-ERYESWELMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYH 385

Query: 241 LQILHDSLFLGWQNQPLFSVSSWH 258
           LQILHDSLFLGWQNQPLFSVSSWH
Sbjct: 386 LQILHDSLFLGWQNQPLFSVSSWH 408

[Close]

BLAST of Chy6G124920 vs. TAIR 10
Match: AT1G55580.1 (GRAS family transcription factor )

HSP 1 Score: 298.1 bits (762), Expect = 6.7e-81
Identity = 149/267 (55.81%), Postives = 196/267 (73.41%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-----FPSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           +H+LD DI  G+QWPPLMQALA+R      P P LRIT  G D+  L++TGDRL++FA S
Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADS 238

Query: 62  LGLRFQFHPLLLLHDRDHHRVIP---AALTLFPDEALAVNCVLYLHRLMKDD---VRVLL 121
           LGL+FQFH L+++ +     ++     AL+    E +AVNCV +LH++  DD   +   L
Sbjct: 239 LGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFL 298

Query: 122 NKIKALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQV 181
           + IK+LN ++VT+AE+EAN     F+ RF EA++HY  +FDSLEATLPPNSRERL +EQ 
Sbjct: 299 SAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQR 358

Query: 182 WFGREISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPS 241
           WFG+EI D+V+ E  ++KQ +  R+E WE M+K  GF N+P+  FALSQAKLLLRLHYPS
Sbjct: 359 WFGKEILDVVAAEETERKQRHR-RFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPS 418

Query: 242 EGYHLQILHDSLFLGWQNQPLFSVSSW 258
           EGY+LQ L++SLFLGWQN+PLFSVSSW
Sbjct: 419 EGYNLQFLNNSLFLGWQNRPLFSVSSW 444

[Close]

BLAST of Chy6G124920 vs. TAIR 10
Match: AT3G03450.1 (RGA-like 2 )

HSP 1 Score: 161.8 bits (408), Expect = 7.5e-40
Identity = 97/264 (36.74%), Postives = 152/264 (57.58%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-FPSPMLRITATG----LDLNFLHKTGDRLSKFAQS 61
           +HV+D  +  G+QWP LMQALA R    P  R+T  G     + + L + G +L++FAQ+
Sbjct: 286 VHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQN 345

Query: 62  LGLRFQFHPLLLLHDRDHHRVIPAALTLFPD-EALAVNCVLYLHRLM--KDDVRVLLNKI 121
           +G+ F+F  L      D   + P      P+ E L VN V  LHRL+     +  LLN +
Sbjct: 346 MGVEFEFKGLAAESLSD---LEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTV 405

Query: 122 KALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFG 181
           KA+ P +VT+ E+EAN N  +F+ RF EAL++Y+ LFDSLE +    S++R+ + +V+ G
Sbjct: 406 KAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRV-MSEVYLG 465

Query: 182 REISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGY 241
           R+I ++V+ E + + + + +    W   +KS GF  I L   A  QA +LL L+   +GY
Sbjct: 466 RQILNVVAAEGSDRVERH-ETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGY 525

Query: 242 HLQILHDSLFLGWQNQPLFSVSSW 258
            ++     L +GWQ +PL + S+W
Sbjct: 526 RVEENDGCLMIGWQTRPLITTSAW 544

[Close]

BLAST of Chy6G124920 vs. TAIR 10
Match: AT5G66770.1 (GRAS family transcription factor )

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-38
Identity = 96/268 (35.82%), Postives = 147/268 (54.85%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHK--------TGDRLSKF 61
           IH++DF I+ G+QWP L+QALA R      +I  +G+    L +        TG+RL  F
Sbjct: 320 IHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDF 379

Query: 62  AQSLGLRFQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDD---VRVLL 121
           A+ L L F F P+L       H +  ++  + PDE LAVN +L L++L+ +    V   L
Sbjct: 380 AKVLDLNFDFIPIL----TPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTAL 439

Query: 122 NKIKALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQV 181
              K+LNP+VVT+ E E + N   F  R   AL  Y+ +F+SLE  L  +S ER+ VE+ 
Sbjct: 440 RLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERE 499

Query: 182 WFGREISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPS 241
            FGR IS ++  E     +   +  E W  ++++ GF ++ LS +A+SQAK+LL  +  S
Sbjct: 500 LFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYS 559

Query: 242 EGYHL-QILHDSLFLGWQNQPLFSVSSW 258
             Y + +     + L W + PL ++SSW
Sbjct: 560 NLYSIVESKPGFISLAWNDLPLLTLSSW 583

[Close]

BLAST of Chy6G124920 vs. TAIR 10
Match: AT1G63100.1 (GRAS family transcription factor )

HSP 1 Score: 155.6 bits (392), Expect = 5.4e-38
Identity = 93/273 (34.07%), Postives = 155/273 (56.78%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADRF-PSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +H++DFDI  G+QWP   Q+LA R  P   +RIT  G     L++TGDRL  FA+++ L+
Sbjct: 386 VHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQ 445

Query: 62  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDD----VRVLLNKIKAL 121
           F+FHP++   DR    V    L +   E++AVNCV+ +H+ + D     +R  L  I++ 
Sbjct: 446 FEFHPVV---DR-LEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRST 505

Query: 122 NPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREI 181
           NP  + +AE+EA  N      R   +L +Y+ +FD++   L  +S  R+ VE++ FGREI
Sbjct: 506 NPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREI 565

Query: 182 SDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLH-YPSEGYHL 241
            +IV+ E + +++ +   +  W  ML+ LGF ++ +S   + Q+K+LLR++   +EG+  
Sbjct: 566 RNIVACEGSHRQERHVG-FRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFN 625

Query: 242 QILHD-----------SLFLGWQNQPLFSVSSW 258
               D            + L W  QPL+++S+W
Sbjct: 626 VERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653

[Close]

BLAST of Chy6G124920 vs. TAIR 10
Match: AT1G66350.1 (RGA-like 1 )

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 90/261 (34.48%), Postives = 153/261 (58.62%), Query Frame = 0


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPS--PMLRITATGLDLNFLHKTGDRLSKFAQSLGL 61
           +HV+D  + HG+QWP L+QALA R P+  P  R+T  G  L  + + G +L + A ++G+
Sbjct: 254 VHVIDLGLNHGLQWPALIQALALR-PNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGV 313

Query: 62  RFQFHPLLLLHDRDHHRVIPAALTLFPD-EALAVNCVLYLHRLM--KDDVRVLLNKIKAL 121
            F+F  + L +  D   + P  L + P  E++AVN V  LHRL+     +   L+ IK++
Sbjct: 314 NFEFKSIALNNLSD---LKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSI 373

Query: 122 NPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREI 181
            P ++T+ E+EAN N  +F+ RF E+L++Y+ LFDSLE    P S++R+ + +++ GR+I
Sbjct: 374 RPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEG---PPSQDRV-MSELFLGRQI 433

Query: 182 SDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQ 241
            ++V+ E   + + + +    W       GF  + +   A  QA +LL L+  ++GY+++
Sbjct: 434 LNLVACEGEDRVERH-ETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVE 493

Query: 242 ILHDSLFLGWQNQPLFSVSSW 258
                L LGWQ +PL + S+W
Sbjct: 494 ENEGCLLLGWQTRPLIATSAW 505

The following BLAST results are available for this feature:

BLAST of Chy6G124920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWC5	9.5e-80	55.81	Scarecrow-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=SCL18 PE=2 SV=1	[more]
Q84MM9	1.8e-54	44.88	Protein MONOCULM 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOC1 PE=2 SV=1	[more]
A0A145P7T2	5.8e-45	40.08	GRAS family protein RAM1 OS=Lotus japonicus OX=34305 GN=RAM1 PE=1 SV=1	[more]
G7L166	7.6e-45	40.08	GRAS family protein RAM1 OS=Medicago truncatula OX=3880 GN=RAM1 PE=1 SV=1	[more]
A0A0M4FMK2	9.3e-43	39.69	GRAS family protein RAM1 OS=Petunia hybrida OX=4102 GN=RAM1 PE=2 SV=1	[more]

BLAST of Chy6G124920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4J7	6.0e-146	98.84	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G039300 PE=3 S...	[more]
G8XQN0	5.7e-144	97.32	GRAS protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A1S3BLL3	2.8e-143	96.90	scarecrow-like protein 18 OS=Cucumis melo OX=3656 GN=LOC103490976 PE=3 SV=1	[more]
A0A5D3D7C3	6.1e-138	96.79	Scarecrow-like protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1GFR5	2.5e-131	89.49	scarecrow-like protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453746 PE=3 SV=...	[more]

BLAST of Chy6G124920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650085.1	2.51e-185	98.84	hypothetical protein Csa_009781 [Cucumis sativus]	[more]
NP_001295852.1	2.86e-182	97.32	scarecrow-like protein 18 [Cucumis sativus] >ACD13207.1 GRAS protein [Cucumis sa...	[more]
XP_008448967.1	2.35e-181	96.90	PREDICTED: scarecrow-like protein 18 [Cucumis melo]	[more]
TYK19432.1	1.29e-176	96.79	scarecrow-like protein 18 [Cucumis melo var. makuwa]	[more]
XP_038903029.1	4.65e-173	92.80	LOW QUALITY PROTEIN: scarecrow-like protein 18 [Benincasa hispida]	[more]

BLAST of Chy6G124920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55580.1	6.7e-81	55.81	GRAS family transcription factor	[more]
AT3G03450.1	7.5e-40	36.74	RGA-like 2	[more]
AT5G66770.1	1.4e-38	35.82	GRAS family transcription factor	[more]
AT1G63100.1	5.4e-38	34.07	GRAS family transcription factor	[more]
AT1G66350.1	1.2e-37	34.48	RGA-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 1..257 e-value: 4.6E-85 score: 285.8
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 2..258
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 1..258 score: 60.205776
IPR030017	Scarecrow-like protein 18	PANTHER	PTHR31636:SF2	SCARECROW-LIKE PROTEIN 18	coord: 2..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G124920.1	Chy6G124920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010014	meristem initiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010223	secondary shoot formation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding