Chy6G124790 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCTCAGGCATGGAGCGATACTTTAAAGAACACGCTACTAAGTTGGGGCTTTATAAACTCAAAAGCAGATGCATCTCTCTATATTCTTCGAACTCACCAAAATGTTGTGCTCCTCCTTGTCTATGTTGATGATGTTATCATCAATGAAAATAATACAG GTTCCTCAGGCATGGAGCGATACTTTAAAGAACACGCTACTAAGTTGGGGCTTTATAAACTCAAAAGCAGATGCATCTCTCTATATTCTTCGAACTCACCAAAATGTTGTGCTCCTCCTTGTCTATGTTGATGATGTTATCATCAATGAAAATAATACAG GTTCCTCAGGCATGGAGCGATACTTTAAAGAACACGCTACTAAGTTGGGGCTTTATAAACTCAAAAGCAGATGCATCTCTCTATATTCTTCGAACTCACCAAAATGTTGTGCTCCTCCTTGTCTATGTTGATGATGTTATCATCAATGAAAATAATACAG VPQAWSDTLKNTLLSWGFINSKADASLYILRTHQNVVLLLVYVDDVIINENNTX Homology
BLAST of Chy6G124790 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-07 Identity = 24/51 (47.06%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Chy6G124790 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 6.5e-07 Identity = 23/52 (44.23%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Chy6G124790 vs. ExPASy TrEMBL
Match: A0A151QZC2 (Copia protein OS=Cajanus cajan OX=3821 GN=KK1_043251 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.4e-09 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Chy6G124790 vs. ExPASy TrEMBL
Match: A0A5D3BCV9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold976G00020 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.4e-09 Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of Chy6G124790 vs. ExPASy TrEMBL
Match: A0A6J1CS58 (uncharacterized protein LOC111013815 OS=Momordica charantia OX=3673 GN=LOC111013815 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of Chy6G124790 vs. ExPASy TrEMBL
Match: A0A803PR46 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08 Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Chy6G124790 vs. ExPASy TrEMBL
Match: A0A2K3P9B0 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g008495 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-08 Identity = 27/52 (51.92%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of Chy6G124790 vs. NCBI nr
Match: GAU17915.1 (hypothetical protein TSUD_330400, partial [Trifolium subterraneum]) HSP 1 Score: 70.5 bits (171), Expect = 2.34e-12 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of Chy6G124790 vs. NCBI nr
Match: TYJ96957.1 (putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 1.12e-11 Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of Chy6G124790 vs. NCBI nr
Match: KYP35708.1 (Copia protein [Cajanus cajan]) HSP 1 Score: 68.2 bits (165), Expect = 1.51e-11 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Chy6G124790 vs. NCBI nr
Match: XP_022144023.1 (uncharacterized protein LOC111013815 [Momordica charantia]) HSP 1 Score: 67.0 bits (162), Expect = 2.48e-11 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of Chy6G124790 vs. NCBI nr
Match: PNY11875.1 (hypothetical protein L195_g008495 [Trifolium pratense]) HSP 1 Score: 66.6 bits (161), Expect = 3.59e-11 Identity = 27/52 (51.92%), Postives = 42/52 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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