Chy6G124760 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G124760
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	(-)-germacrene D synthase-like
Location	chrH06: 23411891 .. 23412142 (+)
RNA-Seq Expression	Chy6G124760
Synteny	Chy6G124760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACAATATGGAGTATCAGAAGAAGAAGCTGTAACTGAACTACAAAAGCAAGTGGTTAATGCATGGAAAGATATAATTGAAGACTATATGAAATCCTCCAAGCTGTTTCCAAGTTTCATCCTTGACCATGTACTAAATGTTGCTCGACTTTCAGATCTCTTTTATAAGGAGGAAGATGGTTATACATTTGCTGATGGAGAAACCAAACGTTTTATTACGTTAATGCTTAAAAATCCTATGCCAATTTGA

mRNA sequence

ATGAAACAATATGGAGTATCAGAAGAAGAAGCTGTAACTGAACTACAAAAGCAAGTGGTTAATGCATGGAAAGATATAATTGAAGACTATATGAAATCCTCCAAGCTGTTTCCAAGTTTCATCCTTGACCATGTACTAAATGTTGCTCGACTTTCAGATCTCTTTTATAAGGAGGAAGATGGTTATACATTTGCTGATGGAGAAACCAAACGTTTTATTACGTTAATGCTTAAAAATCCTATGCCAATTTGA

Coding sequence (CDS)

ATGAAACAATATGGAGTATCAGAAGAAGAAGCTGTAACTGAACTACAAAAGCAAGTGGTTAATGCATGGAAAGATATAATTGAAGACTATATGAAATCCTCCAAGCTGTTTCCAAGTTTCATCCTTGACCATGTACTAAATGTTGCTCGACTTTCAGATCTCTTTTATAAGGAGGAAGATGGTTATACATTTGCTGATGGAGAAACCAAACGTTTTATTACGTTAATGCTTAAAAATCCTATGCCAATTTGA

Protein sequence

MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEEDGYTFADGETKRFITLMLKNPMPI*

Homology

[Close]

BLAST of Chy6G124760 vs. ExPASy Swiss-Prot
Match: B6SCF6 (Germacrene-A synthase OS=Humulus lupulus OX=3486 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-14
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEA  EL K+VVNAWK+I E+ +K + +  S IL   LN ++  DLFYK  D
Sbjct: 483 MKQYGVSEEEAYDELNKRVVNAWKEINEELLKPTGV-ASPILVRALNFSKFMDLFYKNGD 542

Query: 61  GYTFADGETKRFITLMLKNPMP 83
           GYT     TK  +  +L +P+P
Sbjct: 543 GYTQVGKVTKHSVAALLIHPIP 563

[Close]

BLAST of Chy6G124760 vs. ExPASy Swiss-Prot
Match: B9SBV6 (Probable terpene synthase 3 OS=Ricinus communis OX=3988 GN=TPS3 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQ+ VS++EA  EL   VVN WKD+ E+ +K + + P  IL  +LN+ R+ D+ YK+ED
Sbjct: 465 MKQHSVSKQEAYNELNSIVVNMWKDLNEELLKETGVLPKPILACILNIVRVMDVVYKDED 524

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
            YT +    K  +   L NP+P+
Sbjct: 525 SYTNSRNSLKDILATFLVNPVPV 547

[Close]

BLAST of Chy6G124760 vs. ExPASy Swiss-Prot
Match: B6SCF5 (Alpha-humulene synthase OS=Humulus lupulus OX=3486 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.2e-13
Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEA  EL KQ+ NAWK+I E+ +K + +  S IL  VLN ++  DLFYK  D
Sbjct: 483 MKQYGVSEEEAYDELNKQIANAWKEINEELLKPTGV-ASPILVRVLNFSKFMDLFYKNGD 542

Query: 61  GYTFADGETKRFITLMLKNPMP 83
            YT      K  +  +L +P+P
Sbjct: 543 SYTQVGKVAKDSVAALLIDPIP 563

[Close]

BLAST of Chy6G124760 vs. ExPASy Swiss-Prot
Match: B5A435 (Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 9.4e-13
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGV+EEEA  E +KQ+V AWKDI E+ ++  ++ P  +L  +LN+ R+ D+ YK ED
Sbjct: 478 MKQYGVTEEEAHDEFRKQLVKAWKDINEECLRPYRV-PKPLLMRILNLTRVIDVIYKNED 537

Query: 61  GYTFADGETKRFITLMLKNPM 82
           GYT      K  I  +L +PM
Sbjct: 538 GYTHVKKAMKDNIASLLIDPM 557

[Close]

BLAST of Chy6G124760 vs. ExPASy Swiss-Prot
Match: Q8LSC3 (Germacrene A synthase long form OS=Cichorium intybus OX=13427 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-12
Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           +K+Y VSEE A+ EL K + NAWKDI E  +K +++  + +L  +LN+AR+ D+ YK +D
Sbjct: 499 IKEYNVSEEVAIKELMKMIENAWKDINEGCLKPTEVSVA-LLTPILNLARMIDVVYKFDD 558

Query: 61  GYTFADGETKRFITLMLKNPMP 83
           G+TF     K +ITL+  +P P
Sbjct: 559 GFTFPGKTLKDYITLLFVSPPP 579

[Close]

BLAST of Chy6G124760 vs. ExPASy TrEMBL
Match: A0A0A0L5V3 (Terpene_synth_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G040860 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.6e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED
Sbjct: 100 MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 159

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           GYTFADGETKRFITLMLKNPMPI
Sbjct: 160 GYTFADGETKRFITLMLKNPMPI 182

[Close]

BLAST of Chy6G124760 vs. ExPASy TrEMBL
Match: A0A6J1CQI9 ((-)-germacrene D synthase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013402 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.7e-26
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAV EL+KQV+ AWKD+ EDYMKS+K FP+ IL  V+NV RLSD FYKEED
Sbjct: 478 MKQYGVSEEEAVVELEKQVIKAWKDVTEDYMKSNK-FPNAILSCVINVNRLSDFFYKEED 537

Query: 61  GYTFADGETKRFITLMLKNPMP 83
           GYTF +GE KRFIT MLK+P+P
Sbjct: 538 GYTFPNGEIKRFITSMLKDPVP 558

[Close]

BLAST of Chy6G124760 vs. ExPASy TrEMBL
Match: A0A6J1CR35 ((-)-germacrene D synthase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013402 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.7e-26
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAV EL+KQV+ AWKD+ EDYMKS+K FP+ IL  V+NV RLSD FYKEED
Sbjct: 405 MKQYGVSEEEAVVELEKQVIKAWKDVTEDYMKSNK-FPNAILSCVINVNRLSDFFYKEED 464

Query: 61  GYTFADGETKRFITLMLKNPMP 83
           GYTF +GE KRFIT MLK+P+P
Sbjct: 465 GYTFPNGEIKRFITSMLKDPVP 485

[Close]

BLAST of Chy6G124760 vs. ExPASy TrEMBL
Match: A0A6J1CQI4 ((-)-germacrene D synthase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013399 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.5e-25
Identity = 57/83 (68.67%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYG+SEEE + EL+KQV+ AWKDI EDYMKS+K FP+ IL  V+ V+RLSD FYKEED
Sbjct: 478 MKQYGISEEETIVELEKQVIKAWKDITEDYMKSTK-FPNAILSCVMXVSRLSDFFYKEED 537

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           GYTF++GE +RFIT MLK+P+P+
Sbjct: 538 GYTFSNGEIRRFITSMLKDPVPL 559

[Close]

BLAST of Chy6G124760 vs. ExPASy TrEMBL
Match: A0A6J1CR31 ((-)-germacrene D synthase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013399 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.5e-25
Identity = 57/83 (68.67%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYG+SEEE + EL+KQV+ AWKDI EDYMKS+K FP+ IL  V+ V+RLSD FYKEED
Sbjct: 405 MKQYGISEEETIVELEKQVIKAWKDITEDYMKSTK-FPNAILSCVMXVSRLSDFFYKEED 464

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           GYTF++GE +RFIT MLK+P+P+
Sbjct: 465 GYTFSNGEIRRFITSMLKDPVPL 486

[Close]

BLAST of Chy6G124760 vs. NCBI nr
Match: XP_004151461.3 ((-)-germacrene D synthase [Cucumis sativus])

HSP 1 Score: 167 bits (424), Expect = 3.46e-47
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED
Sbjct: 470 MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 529

Query: 61  GYTFADGETKRFITLMLKNPMPI 83
           GYTFADGETKRFITLMLKNPMPI
Sbjct: 530 GYTFADGETKRFITLMLKNPMPI 552

[Close]

BLAST of Chy6G124760 vs. NCBI nr
Match: KGN55986.2 (hypothetical protein Csa_011696 [Cucumis sativus])

HSP 1 Score: 167 bits (424), Expect = 6.40e-47
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED
Sbjct: 515 MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 574

Query: 61  GYTFADGETKRFITLMLKNPMPI 83
           GYTFADGETKRFITLMLKNPMPI
Sbjct: 575 GYTFADGETKRFITLMLKNPMPI 597

[Close]

BLAST of Chy6G124760 vs. NCBI nr
Match: XP_038903578.1 (LOW QUALITY PROTEIN: (-)-germacrene D synthase-like [Benincasa hispida])

HSP 1 Score: 124 bits (312), Expect = 2.33e-31
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MK+YGVSEEEA+T+L K+V  AWKD+ +DY+KSSK FP+ ILD VLNVARLSDLFYKE D
Sbjct: 413 MKEYGVSEEEALTKLDKEVERAWKDVTKDYIKSSK-FPNVILDCVLNVARLSDLFYKEGD 472

Query: 61  GYTFADGETKRFITLMLKNPMPI 83
           GYTFADGETK+FITL+L +P+PI
Sbjct: 473 GYTFADGETKQFITLLLIHPVPI 494

[Close]

BLAST of Chy6G124760 vs. NCBI nr
Match: XP_022143532.1 ((-)-germacrene D synthase-like isoform X2 [Momordica charantia])

HSP 1 Score: 123 bits (309), Expect = 5.76e-31
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAV EL+KQV+ AWKD+ EDYMKS+K FP+ IL  V+NV RLSD FYKEED
Sbjct: 405 MKQYGVSEEEAVVELEKQVIKAWKDVTEDYMKSNK-FPNAILSCVINVNRLSDFFYKEED 464

Query: 61  GYTFADGETKRFITLMLKNPMP 82
           GYTF +GE KRFIT MLK+P+P
Sbjct: 465 GYTFPNGEIKRFITSMLKDPVP 485

[Close]

BLAST of Chy6G124760 vs. NCBI nr
Match: XP_022143531.1 ((-)-germacrene D synthase-like isoform X1 [Momordica charantia])

HSP 1 Score: 123 bits (309), Expect = 1.02e-30
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGVSEEEAV EL+KQV+ AWKD+ EDYMKS+K FP+ IL  V+NV RLSD FYKEED
Sbjct: 478 MKQYGVSEEEAVVELEKQVIKAWKDVTEDYMKSNK-FPNAILSCVINVNRLSDFFYKEED 537

Query: 61  GYTFADGETKRFITLMLKNPMP 82
           GYTF +GE KRFIT MLK+P+P
Sbjct: 538 GYTFPNGEIKRFITSMLKDPVP 558

[Close]

BLAST of Chy6G124760 vs. TAIR 10
Match: AT1G31950.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 8.7e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGV++EEA  EL+K  V   K ++E++M S    P  +L   LN+AR+ D+FY E D
Sbjct: 523 MKQYGVTKEEASRELRKMYVYRKKVVVEEFMNSHDHVPRQVLLRCLNIARIFDVFYTEGD 582

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           GY+   G+ + F+T +  +P+P+
Sbjct: 583 GYSEPKGKIEHFMTSLYLHPIPL 605

[Close]

BLAST of Chy6G124760 vs. TAIR 10
Match: AT3G14540.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 9.7e-13
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGV++EEA  EL+K  +   K ++E++M S    P  +L   LN ARL D+ Y E D
Sbjct: 519 MKQYGVTKEEASRELRKMYIYNKKVVVEEFMNSHDRVPRQVLLRCLNFARLFDVIYTEGD 578

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           GY+   G+ + F+T +  +P+P+
Sbjct: 579 GYSEPKGKIEHFMTSLYVHPIPL 601

[Close]

BLAST of Chy6G124760 vs. TAIR 10
Match: AT3G14520.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-12
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQYGV++EEA  EL+K   N  K ++E++M S    P  +L   LN ARL D+ Y E D
Sbjct: 522 MKQYGVTKEEASQELRKIYSNNKKVVMEEFMNSHDHVPRQVLLRCLNFARLFDVMYTEGD 581

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           GY+   G+ + F+T +  +P+P+
Sbjct: 582 GYSEPKGKIEHFMTSLYVHPIPL 604

[Close]

BLAST of Chy6G124760 vs. TAIR 10
Match: AT3G29410.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-12
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 1   MKQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEED 60
           MKQ+GV++E AV EL+K    ++K +IE++M +SK  P  IL   +N+AR+ DLFYKE D
Sbjct: 522 MKQHGVTKEAAVEELRKMERESYKIMIEEFM-TSKAMPRQILVRPVNIARVMDLFYKEAD 581

Query: 61  GYTFADGETKRFITLMLKNPMPI 84
           G+   D +  + I  +  +P+P+
Sbjct: 582 GFGHPDQKLLQLIASLFLHPIPL 603

[Close]

BLAST of Chy6G124760 vs. TAIR 10
Match: AT1G70080.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 4.1e-11
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 2   KQYGVSEEEAVTELQKQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEEDG 61
           KQ+ VSEEEA  E +K+  +  K + E+++K++K  P  IL  VLN  RL+D+ YK  DG
Sbjct: 530 KQHKVSEEEACIEFEKKTNHMSKVMNEEFLKAAKFIPLHILRPVLNYGRLADVCYKYGDG 589

Query: 62  YTFADGETKRFIT 75
           YTFA  + K +IT
Sbjct: 590 YTFAGEKIKDYIT 602

The following BLAST results are available for this feature:

BLAST of Chy6G124760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6SCF6	2.2e-14	51.22	Germacrene-A synthase OS=Humulus lupulus OX=3486 PE=1 SV=1	[more]
B9SBV6	1.5e-13	42.17	Probable terpene synthase 3 OS=Ricinus communis OX=3988 GN=TPS3 PE=3 SV=1	[more]
B6SCF5	3.2e-13	48.78	Alpha-humulene synthase OS=Humulus lupulus OX=3486 PE=1 SV=1	[more]
B5A435	9.4e-13	46.91	Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1	[more]
Q8LSC3	1.2e-12	43.90	Germacrene A synthase long form OS=Cichorium intybus OX=13427 PE=1 SV=1	[more]

BLAST of Chy6G124760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5V3	3.6e-39	100.00	Terpene_synth_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G04...	[more]
A0A6J1CQI9	7.7e-26	74.39	(-)-germacrene D synthase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1CR35	7.7e-26	74.39	(-)-germacrene D synthase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1CQI4	6.5e-25	68.67	(-)-germacrene D synthase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1CR31	6.5e-25	68.67	(-)-germacrene D synthase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Chy6G124760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151461.3	3.46e-47	100.00	(-)-germacrene D synthase [Cucumis sativus]	[more]
KGN55986.2	6.40e-47	100.00	hypothetical protein Csa_011696 [Cucumis sativus]	[more]
XP_038903578.1	2.33e-31	74.70	LOW QUALITY PROTEIN: (-)-germacrene D synthase-like [Benincasa hispida]	[more]
XP_022143532.1	5.76e-31	74.39	(-)-germacrene D synthase-like isoform X2 [Momordica charantia]	[more]
XP_022143531.1	1.02e-30	74.39	(-)-germacrene D synthase-like isoform X1 [Momordica charantia]	[more]

BLAST of Chy6G124760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31950.1	8.7e-14	42.17	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G14540.1	9.7e-13	40.96	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G14520.1	2.2e-12	42.17	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G29410.1	2.8e-12	42.17	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G70080.1	4.1e-11	46.58	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 1..83 e-value: 1.4E-21 score: 78.6
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 1..81
None	No IPR available	PANTHER	PTHR31045	PLAC8 FAMILY PROTEIN-RELATED	coord: 1..83
None	No IPR available	PANTHER	PTHR31045:SF4	TERPENOID SYNTHASE 17-RELATED	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G124760.1	Chy6G124760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0010333	terpene synthase activity