Chy6G124540 (gene) Cucumber (hystrix) v1

Overview
NameChy6G124540
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH06: 23189001 .. 23190474 (+)
RNA-Seq ExpressionChy6G124540
SyntenyChy6G124540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTATATTATTGAAAGGAGGTGAAAACGAGGTCGTTTAATGTGCGCCTTATCATCGGAAGAGCAAGAATATGGGCTTAGCCTTTCATGATTACATCTCATCGCAACGCTACAAAACATCAATTTTTTTGTTTTTTTATTCCTTCCATTAATATATATTTTTTATATATATTATTTGATTTATTTGATTTATTAAACCCAAAAGAAAAAAAAAACCAAATAATTGTTTTTGGTTTGGTTTTCCGTTCGTAGCTTTTGGCTATAAGAACGCTTCGCAATCTCTCTCTCTCTCTCCTTCTCTTTCTCTTCCCCCGGAATCGCATTTCTTCTTCCACCACCGCCGGAACGTGTCCTCATTTCCACCCTCTCCACCTCTCTTCATACGGTAAACCATTTTTTTTTTTTTTTTTTTTTGCTTTTCTACAGAAATTTCTCCCCCAATAAACGGAGAATATGATTGCTGGGTTTTCTTGTTGTTGTTGCTGCTGCTGCTGCTGGAAGGTTCTTCAACTTCAATTGTATTACGTTTTTTCTTCTGCAGATCGTTTTTTGGAATTTGAAATCTGTTTTTTGGTGGGGCCTAGAGTGAGGAATCGCGCGATCGGATCTGTTTTGGATTTAGAGATCCATTGTTGGGACGGATTTTGTGGTGTGTTTTCATTTTGTGATGCTTATTGTTGCTTTTTTTCTTTTGGTAGTTGTTTGAGTGTAATTCTTTTTGTGGGTGGAAATTACGGCGGCCATTTTCCTTTTGCTTTATTCAAATTCTGCTCTCTTGTTGCTCGTGGCAATGCTTGTGGAAGGTTTTTTTTTCCTTTTTTTGCATTTTCATATACTTGGTAGAGATTTTTCTGATCTGGGAACATTATTTTCTTTTATATGATTATTTGGTGGAAGGACTATCAACTATGCAAGAACTACATCACCATAATTCTATAAATACAATAGGAGCAGGGGATTCGAACCACATACTTTATGGTTATTAACACATACAAATGCCAGTTGCGTCATCCTCATTGTTCTAGTTGCCACAAATGGTTCTTTGGCTTATATTGGATTCGTTCAAGAGATTAGAGGCAGTTTAACACTTTAACTGTGGTACACCATAATTTTCACATTTCATTGACGACTATAAATTAGTTCTTTTATCCTATGGGAAAACCCATATGATAATCAAATTGTTGTGATTCATTAAAGAAAGGAAGAGGAGAAAAAGAAAGAGAGAAGGCGTTGATGCACGGATAGTCAACTTCCCGTAAGGAAGTTTGAGTTGGGAAGTCGTTGATGCTAGTTTTTGTTTTGTTAATTATTGATTTATTAATTATTATTATTTGTTCTTGAAGTTATGTAATATCGAAAAGCTACTTGAGCTATTAGTTTTTTTTCCCAGAAAATAATTTTTTACTAACGTACTATCTTTTGTTCTATTAAATTCCTAATGCACTCAAAATATTGTCTCGGCCAGAATAG

mRNA sequence

ATGGAAATTATATTATTGAAAGGAGGTGAAAACGAGCTTTTGGCTATAAGAACGCTTCGCAATCTCTCTCTCTCTCTCCTTCTCTTTCTCTTCCCCCGGAATCGCATTTCTTCTTCCACCACCGCCGGAACGTGTCCTCATTTCCACCCTCTCCACCTCTCTTCATACGGTTCTTCAACTTCAATTGTATTACGTTTTTTCTTCTGCAGATCGTTTTTTGGAATTTGAAATCTGTTTTTTGGTGGGGCCTAGAGTGAGGAATCGCGCGATCGGATCTGTTTTGGATTTAGAGATCCATTGTTGGGACGGATTTTGTGAATAG

Coding sequence (CDS)

ATGGAAATTATATTATTGAAAGGAGGTGAAAACGAGCTTTTGGCTATAAGAACGCTTCGCAATCTCTCTCTCTCTCTCCTTCTCTTTCTCTTCCCCCGGAATCGCATTTCTTCTTCCACCACCGCCGGAACGTGTCCTCATTTCCACCCTCTCCACCTCTCTTCATACGGTTCTTCAACTTCAATTGTATTACGTTTTTTCTTCTGCAGATCGTTTTTTGGAATTTGAAATCTGTTTTTTGGTGGGGCCTAGAGTGAGGAATCGCGCGATCGGATCTGTTTTGGATTTAGAGATCCATTGTTGGGACGGATTTTGTGAATAG

Protein sequence

MEIILLKGGENELLAIRTLRNLSLSLLLFLFPRNRISSSTTAGTCPHFHPLHLSSYGSSTSIVLRFFFCRSFFGI*NLFFGGA*SEESRDRICFGFRDPLLGRIL*IX
Homology
[Close]
BLAST of Chy6G124540 vs. NCBI nr
Match: KGN55990.1 (hypothetical protein Csa_010829 [Cucumis sativus])

HSP 1 Score: 49.3 bits (116), Expect = 8.01e-05
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0 

Query: 1  MEIILLKGGENELLAIRTLRNLSLSL 26
          MEIILLKGGENELLAIRTLRNLSLSL
Sbjct: 1  MEIILLKGGENELLAIRTLRNLSLSL 26

The following BLAST results are available for this feature:
BLAST of Chy6G124540 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G124540 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G124540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55990.18.01e-05100.00hypothetical protein Csa_010829 [Cucumis sativus][more]
BLAST of Chy6G124540 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G124540.1Chy6G124540.1mRNA