Chy6G123660 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G123660
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	TF-B3 domain-containing protein
Location	chrH06: 22136610 .. 22139719 (-)
RNA-Seq Expression	Chy6G123660
Synteny	Chy6G123660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAACCACCGAAATACAAGTATAAAAAAATATAATATTAAAATAAATAAAATAATATAAGGTAGAATTGCCGTTGATAGTAAAAAAAAAAAATAAACGAAACTTTTTACAAAAATATAACAATATATGGATGATAGAGAGTTGAATGTATTTTGTTATATTTTGTAAATAATTTTAATATTTTGCTATTTTTAAAAATGCTCCTCAAATACAATAAATAAAAAAGTAAAAAAGTAAAAAAATTTCCAAAATTATTCACTATCTCCAATTTCTTTGGAATTTCAACCAATATGTATTAAATCACATCAAATGTAGAAATATGCACTGGGCGGGAGCAGGGATGCTACTCTCCATCTTCTATCTCATTCCTCATGCAATCAATTTTCCCACGAGGAACGGGGAAGGATTTTCCGCGGGATCAGGTTACCTGCAGGAAAATATTCTTTTTTTTTTAAGTTTTAATCTCATTTTCCAATCCACATATACTTGAAACGTACATACATTTTCAATGTTTTTATTTTCGATTGAATATTATCAATTTTCTTATCTAAAACAATTAAAATATCAAATTCTCATTGTTTATAAAAATAAAAAATCAACTATTAGAAGTTACATTTAGAAATTCATACAAAAGAAATTAAAAGATCAATCCATAAGTATTATAATAAAGTCTTCAATTACATCCTATTTTTTAAGAACATATACTTTTTAAGAAAAGTTCACAATATAGAAATAAAATTAGGAAAAAAAAAATAGTAGAGAAAAAAACGAAAAGAAGAATATTAAAATAAGTTTCTTTTTACTCTTTTACATATTATTAAATAAATAAATATTTATATTTATATTTAATATATGTTGTTTTTCTTATTTAATATTTGGGGACGGGTGGAGATGCCCTCCCCATTTCCGGTGTATTCAAGGGGATATGTTAAATGGACATCTTTAACCAAATGCCACTATTTATAGACAATTTGACAAACAAGAGATTATTTAGTTTGAAGATTTTATGCACGGAAATGAGTACACTTTTAAATCAATAAAACCTATTTAAAACTCAGGTTTGTTTCAAAGTTACAAAAGTTTTTTATTCCATTCCAAAACAGTGAGCTTTCTCTTTTTCCCTCTTTTTTTATTTTATATATAATTTAATTTTTAATTAATACTAATTTTTTTTTAAAAAAATTATTATAAAAAATTTATTTTATAAATCAATAATAATCTATTAAAATATTTACCAAACTTATTTTATAAATAATACAATTATTTCTTTACACACATCATTAATTAATTGCTAACAATATATTAAATATATTTAATTGATAAGCTAAAGTTAGTTAATTTGTCAGTACAAAAATTCGTTTTTCAATAATAATAAGATACGTTTTTAAAAATAGTAAATTATTTAAATTATTTACGAAATATAGCAAAATCTATCCAACTTTGTATTAGTTTATTTAATTTTTTTCACTATATTTCGTAAATAGTTACATTATTTTGCTATACTTAGTTTTAAATTACCAATTTCTTTTTAAAAAATTAATTATCAACTACTCAATTTTTAAGTATTTATAGTTAAAATAATTATTGATTCTTAATTAATTATCTTTATTAATATATTATTTAATTAAATAATTTATTAAATTTATATAAGATTTTTCTGCTCAATTTTATAAATTAAATTCAAACATATTTTTTGTCCATAAAATTATGATAGCATTATCTATGTACAGCTAAACACTCTCATATTTGATTTTTAGATATTTTATTATGGAATATTTCATTCTTAAGCATCTTTTTTTTTCAGTCATTTGTAAACCTTAAGTCAAACGACTCCTAACGATATAGATAGATAAGGTGTCAGTGATACATAACATTTTGACACTAAACATAATAAATATCTATTTAATAATATTTATTATAATATTTTAATGTTGTGGAAGATTTTTGAAAATTTTAAAACTCTATTTGTTAGGGTGATTCGATTTCCTTTTTATCTTTTCGAAAATTAAAAAATAAAGTTATAGATAATATATTTATTTGCAAAATAACTCTAACAATCTTTTTTTGAACTATTCTCTCTAAAGTTTGTAAGTGATATATTTTATTTTTCTTTTCGTTTTATCGTAGTAAATTATTTTTAAAATGATTATTTGAAAAACTAACACTACAAATTGTTGGGGTTTTTTTTCTTTTAATTAATATATTGAGTATATGAAGTGTATTGAAAAATTCCCAAAACATTTCCCTTTCCTTTGTGGAAATTGGGTTCTCTTCCTTTTCCTTGTAGGAAATAACAATTAATTCAGTCTTATAAATTCTACTACTCCTACGTCTCCAAATAAATAAATAACAAACCTTTCTTTCTCCTTTCTACCCATTCTTTTCTTCATCGCCAACAACAATTTCAGGTTCATTCTAATTAATAAGCTACGTTACATCTAGTGGTTGAGGTACATTACACCTACAACAACAAAATAGTTGCCAAGGATGTCTACAAAGCATCTTTGATTCTTTATGGCATGGTGATAAGTAAATGTGTGGAACCATTTGAAGAGCCGATAGATCGTTTCAACGATCAACTTCCAAGTACTTCTACTTCTCTAGTCAATGAACAACTTCCTATAGTCAATGAAGTTCTACCCAACAATGATGATGACGACAATAATGAAAATGTGGCAGCGGCGGTCGTGGTCGGTAGAGATCAGGGTAGATTTCCGCCAATGCCAGTGATCCAAAGCATAATTGGAGAGTGCAGTCCACCATTTGTGAAGCAATTGACGAAAACTGAGGTGACTGACAATCAAGGAAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGCTTCGATGTTCAATGATGATGAGGATCTGAAGGATGGAATTAGTGTTATTGTTTATGATACTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAATTTTACGTGCTAACAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACTGGGTGAATTTATTAATGTTTGGATGTTTCGACATGTCGTCACCCAGAAGCTTTGCTTTGCTATTATGAGAGGACAAGCTGAAGAACATTATTGA

mRNA sequence

ATGAGGAACCACCGAAATACAATGGTTGAGGTACATTACACCTACAACAACAAAATAGTTGCCAAGGATGTCTACAAAGCATCTTTGATTCTTTATGGCATGGTGATAAGTAAATGTGTGGAACCATTTGAAGAGCCGATAGATCGTTTCAACGATCAACTTCCAAGTACTTCTACTTCTCTAGTCAATGAACAACTTCCTATAGTCAATGAAGTTCTACCCAACAATGATGATGACGACAATAATGAAAATGTGGCAGCGGCGGTCGTGGTCGGTAGAGATCAGGGTAGATTTCCGCCAATGCCAGTGATCCAAAGCATAATTGGAGAGTGCAGTCCACCATTTGTGAAGCAATTGACGAAAACTGAGGTGACTGACAATCAAGGAAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGCTTCGATGTTCAATGATGATGAGGATCTGAAGGATGGAATTAGTGTTATTGTTTATGATACTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAATTTTACGTGCTAACAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACTGGGTGAATTTATTAATGTTTGGATGTTTCGACATGTCGTCACCCAGAAGCTTTGCTTTGCTATTATGAGAGGACAAGCTGAAGAACATTATTGA

Coding sequence (CDS)

ATGAGGAACCACCGAAATACAATGGTTGAGGTACATTACACCTACAACAACAAAATAGTTGCCAAGGATGTCTACAAAGCATCTTTGATTCTTTATGGCATGGTGATAAGTAAATGTGTGGAACCATTTGAAGAGCCGATAGATCGTTTCAACGATCAACTTCCAAGTACTTCTACTTCTCTAGTCAATGAACAACTTCCTATAGTCAATGAAGTTCTACCCAACAATGATGATGACGACAATAATGAAAATGTGGCAGCGGCGGTCGTGGTCGGTAGAGATCAGGGTAGATTTCCGCCAATGCCAGTGATCCAAAGCATAATTGGAGAGTGCAGTCCACCATTTGTGAAGCAATTGACGAAAACTGAGGTGACTGACAATCAAGGAAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGCTTCGATGTTCAATGATGATGAGGATCTGAAGGATGGAATTAGTGTTATTGTTTATGATACTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAATTTTACGTGCTAACAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACTGGGTGAATTTATTAATGTTTGGATGTTTCGACATGTCGTCACCCAGAAGCTTTGCTTTGCTATTATGAGAGGACAAGCTGAAGAACATTATTGA

Protein sequence

MRNHRNTMVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEPIDRFNDQLPSTSTSLVNEQLPIVNEVLPNNDDDDNNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWASKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQAEEHY*

Homology

[Close]

BLAST of Chy6G123660 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 112 SPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMI 171
           S P  KQL  ++V  +Q  L L KE V   +     D E+   GI V VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 172 FKLW-ASKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAI 220
           FK+W   K  VLT  WK+F +   L+   +F+ VWMFRH+ T+KLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of Chy6G123660 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.0e-14
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 117 KQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWA 176
           +QL  ++V DNQ RL L KE V   + ++   ++    G++V VY   G  + M+ K+W 
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIWI 126

Query: 177 SKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAI 220
               VLT  WK F K+  L +  +F+ +WMFRH  T+++CFAI
Sbjct: 127 KGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of Chy6G123660 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-07
Identity = 32/92 (34.78%), Postives = 44/92 (47.83%), Query Frame = 0


Query: 112 SPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMI 171
           S P  KQL  ++V  +Q RL L KE V   +     + ED   G+ V VY  +G    M 
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 172 FKLW-ASKFYVLTKSWKEFYKTNDLTQLGEFI 203
           FK+W   K  VLT  W +F     L +  +F+
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFV 213

[Close]

BLAST of Chy6G123660 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104
Identity = 196/225 (87.11%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 8   MVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEPIDRFNDQLPSTSTSLVNEQ-- 67
           MV+VHYTYNNKIVA+DVYKASLILY M +SK VEPFEEPIDRFN+QL STSTSLVNEQ  
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP 60

Query: 68  -----LPIVNEVLPNNDDDD-NNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVKQL 127
                 P+VNEVLPNNDDD+ NNENVAAAVVVGRDQGRFPPM VIQ+IIGECSPPFVKQL
Sbjct: 61  VVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL 120

Query: 128 TKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWASKF 187
           TKT+VTDNQGRLALHKEFVNLNL  MFNDDEDL+DGISVIVYD EGREYDMIFKLWASK 
Sbjct: 121 TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL 180

Query: 188 YVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQA 225
           YVLTKSWKEFYKTNDLTQ GEFI+VWMFRHVVTQKLCFAIMRGQA
Sbjct: 181 YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of Chy6G123660 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.1e-70
Identity = 149/230 (64.78%), Postives = 168/230 (73.04%), Query Frame = 0


Query: 8   MVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEP--------IDRFNDQLP--ST 67
           MV+V Y YNNKIV K+VY+A L L  M   K  EPFEEP        I   +DQ P  + 
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEM--KKSSEPFEEPNQFPSSTSISMVDDQPPVVNE 60

Query: 68  STSLVNEQLPIVNEVLPNNDDDDNNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVK 127
              +VNE  P+VNE L NN +++NNENV AAVV  RD GR PPM VIQ+IIGECSPPFVK
Sbjct: 61  QPPIVNEHAPVVNEALLNN-NNNNNENV-AAVVADRDLGRLPPMAVIQNIIGECSPPFVK 120

Query: 128 QLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWAS 187
           QLTKT+VTD+QGRLALHKEFVN NL  MFN DE L +GISV VYD+EGREYDM F+LW S
Sbjct: 121 QLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRLWTS 180

Query: 188 KFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQAEEH 228
           K YVLTKSWK+FY  N LT+  EFI +WMFRHVV  KLCFAIMRG  E H
Sbjct: 181 KLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVEGH 226

[Close]

BLAST of Chy6G123660 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49
Identity = 96/126 (76.19%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 101 MPVIQSIIGECSPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIV 160
           M VIQ+IIGECSPPFVKQL KT+VT++QGRLALHKEFV  NL  MFN  E+LK+GISV V
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 161 YDTEGREYDMIFKLWASKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIM 220
           YD+EGREYDMIFK W SK YVLTKSW +FYK+N+LT+ GEFI+VWMFRHVV +KLCFAIM
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 221 RGQAEE 227
           RG AE+
Sbjct: 121 RGDAEQ 126

[Close]

BLAST of Chy6G123660 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 69  VNEVLPNNDDDDNNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVKQLTKTEVTDNQ 128
           VN+  P +  ++NN+        G ++   PP+P I+ +IG+CS  + K+LT ++V + Q
Sbjct: 87  VNQEAPPDPPNNNND--------GEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQ 146

Query: 129 GRLALHKEFVNLNLASMFN---DDEDLKDGISVIVYDTEGREYDMIFKLWASKFYVLTKS 188
           GRLA+ KEFV   LA MFN   ++E+L++GI V VY+ EGRE+ M FK+WASK YVL K 
Sbjct: 147 GRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG 206

Query: 189 WKEFYKTNDLT--QLGEFINVWMFRHVVTQKLCFAIMRGQAEEH 228
           WK F K N+LT    GEF+ +WMFRH  T  LCFAI+ G    H
Sbjct: 207 WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH 242

[Close]

BLAST of Chy6G123660 vs. ExPASy TrEMBL
Match: A0A2P6P5L3 (Putative transcription factor B3-Domain family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0192641 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.5e-26
Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 82  NENVAAAVVVGR-DQGRFPPMPVIQSIIGECSPPFVKQLTKTEVTDNQGRLALHKEFVNL 141
           N NV   +  G       PP+P ++  I  CS PF KQLT ++V D+Q RLA+ KE V  
Sbjct: 104 NSNVCQGLFYGNYAPPNLPPVPRLRQFIEICSQPFEKQLTFSDVKDDQSRLAMSKEDVQK 163

Query: 142 NLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWASKFYVLTKSWKEFYKTNDLTQLGE 201
            L  + N++EDL+ GI V  YD +G+EY M+FK+W  K +VLT+ WK F   + L +  +
Sbjct: 164 RLMPLLNENEDLRRGIQVTTYDLDGKEYPMVFKIWVEKIHVLTEGWKAFCHDHKLVEKQD 223

Query: 202 FINVWMFRHVVTQKLCFAI 220
           F+ VWMFR+  T  LCF I
Sbjct: 224 FVTVWMFRNAATGSLCFVI 242

[Close]

BLAST of Chy6G123660 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus])

HSP 1 Score: 387 bits (993), Expect = 2.21e-134
Identity = 196/225 (87.11%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 8   MVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEPIDRFNDQLPSTSTSLVNEQ-- 67
           MV+VHYTYNNKIVA+DVYKASLILY M +SK VEPFEEPIDRFN+QL STSTSLVNEQ  
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP 60

Query: 68  -----LPIVNEVLPNNDDDD-NNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVKQL 127
                 P+VNEVLPNNDDD+ NNENVAAAVVVGRDQGRFPPM VIQ+IIGECSPPFVKQL
Sbjct: 61  VVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL 120

Query: 128 TKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWASKF 187
           TKT+VTDNQGRLALHKEFVNLNL  MFNDDEDL+DGISVIVYD EGREYDMIFKLWASK 
Sbjct: 121 TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL 180

Query: 188 YVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQA 224
           YVLTKSWKEFYKTNDLTQ GEFI+VWMFRHVVTQKLCFAIMRGQA
Sbjct: 181 YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of Chy6G123660 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus])

HSP 1 Score: 293 bits (751), Expect = 1.44e-97
Identity = 153/227 (67.40%), Postives = 179/227 (78.85%), Query Frame = 0


Query: 8   MVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEPIDRFNDQLPS-TSTSLVNEQ- 67
           MV+V YTYNNKIV K VY+ASL L  M  S+C++PFE+P+ R N++  S TS S++N+Q 
Sbjct: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60

Query: 68  ------LPIVNEVLPNNDDDDNNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVKQL 127
                  PIVNE LPNN    NNENVA AV  GRD GR PPM VIQ+IIGECSPPFVKQL
Sbjct: 61  PILIERAPIVNEALPNN----NNENVAVAVA-GRDWGRVPPMAVIQNIIGECSPPFVKQL 120

Query: 128 TKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWASKF 187
            KT+VT++QGRLALHKEFV  NL  MFN  E+LK+GISV VYD+EGREYDMIFK W SK 
Sbjct: 121 MKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKL 180

Query: 188 YVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQAEE 226
           YVLTKSW +FYK+N+LT+ GEFI+VWMFRHVV +KLCFAIMRG AE+
Sbjct: 181 YVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQ 222

[Close]

BLAST of Chy6G123660 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (697), Expect = 2.59e-89
Identity = 149/230 (64.78%), Postives = 168/230 (73.04%), Query Frame = 0


Query: 8   MVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEP--------IDRFNDQLPSTST 67
           MV+V Y YNNKIV K+VY+A L L  M   K  EPFEEP        I   +DQ P  + 
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEM--KKSSEPFEEPNQFPSSTSISMVDDQPPVVNE 60

Query: 68  S--LVNEQLPIVNEVLPNNDDDDNNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVK 127
              +VNE  P+VNE L NN+++ NNENVAA VV  RD GR PPM VIQ+IIGECSPPFVK
Sbjct: 61  QPPIVNEHAPVVNEALLNNNNN-NNENVAA-VVADRDLGRLPPMAVIQNIIGECSPPFVK 120

Query: 128 QLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWAS 187
           QLTKT+VTD+QGRLALHKEFVN NL  MFN DE L +GISV VYD+EGREYDM F+LW S
Sbjct: 121 QLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRLWTS 180

Query: 188 KFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQAEEH 227
           K YVLTKSWK+FY  N LT+  EFI +WMFRHVV  KLCFAIMRG  E H
Sbjct: 181 KLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVEGH 226

[Close]

BLAST of Chy6G123660 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (466), Expect = 1.74e-54
Identity = 102/225 (45.33%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 8   MVEVHYTYNNKIVAKDVYKASLILYGMVISKCVEPFEEPIDRFNDQLPSTSTSLVNEQLP 67
           MV VHY +NN+I+ KDVY+ + I + +      E F EP    ++Q+  +++  ++++  
Sbjct: 1   MVRVHYRHNNRIIEKDVYETARIFHCLCTG---EQFPEPSYSSDEQVSGSTSGDMDDE-- 60

Query: 68  IVNEVLPNNDDDD------NNENVAAAVVVGRDQGRFPPMPVIQSIIGECSPPFVKQLTK 127
             NE    N D+D          V A VV+       P + VI +IIG  SPP+ K+LTK
Sbjct: 61  --NEAPSINGDEDVALEVEEVAEVVAPVVI-------PALAVIMNIIGARSPPWEKRLTK 120

Query: 128 TEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWASKFYV 187
           ++V++ QGRL + KEFV  +L  MFN DED  +GI V VY+ EGR+YDM FKLWASK YV
Sbjct: 121 SDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYV 180

Query: 188 LTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAIMRGQAEE 226
           LTK W +FYKTN+LT  G ++ +WMFRHV T K+CFA+  GQ  E
Sbjct: 181 LTKGWNDFYKTNNLTDPGLYVTLWMFRHVETHKICFAVTAGQFGE 211

[Close]

BLAST of Chy6G123660 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160 bits (406), Expect = 4.17e-46
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 98  FPPMPVIQSIIGECSPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGIS 157
            P + VI +IIG  SPP+ K+LTK++V++ QGRL + KEFV  +L  MFN DED  +GI 
Sbjct: 32  IPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGID 91

Query: 158 VIVYDTEGREYDMIFKLWASKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCF 217
           V VY+ EGR+YDM FKLWASK YVLTK W +FYKTN+LT+ G ++ +WMFRHV T K+CF
Sbjct: 92  VTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICF 151

Query: 218 AIMRGQAEE 226
           A+  GQ  E
Sbjct: 152 AVTAGQFGE 160

[Close]

BLAST of Chy6G123660 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-17
Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 112 SPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMI 171
           S P  KQL  ++V  +Q  L L KE V   +     D E+   GI V VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 172 FKLW-ASKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAI 220
           FK+W   K  VLT  WK+F +   L+   +F+ VWMFRH+ T+KLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of Chy6G123660 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-15
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 117 KQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMIFKLWA 176
           +QL  ++V DNQ RL L KE V   + ++   ++    G++V VY   G  + M+ K+W 
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIWI 126

Query: 177 SKFYVLTKSWKEFYKTNDLTQLGEFINVWMFRHVVTQKLCFAI 220
               VLT  WK F K+  L +  +F+ +WMFRH  T+++CFAI
Sbjct: 127 KGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of Chy6G123660 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 32/92 (34.78%), Postives = 44/92 (47.83%), Query Frame = 0


Query: 112 SPPFVKQLTKTEVTDNQGRLALHKEFVNLNLASMFNDDEDLKDGISVIVYDTEGREYDMI 171
           S P  KQL  ++V  +Q RL L KE V   +     + ED   G+ V VY  +G    M 
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 172 FKLW-ASKFYVLTKSWKEFYKTNDLTQLGEFI 203
           FK+W   K  VLT  W +F     L +  +F+
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFV 213

The following BLAST results are available for this feature:

BLAST of Chy6G123660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR14	3.8e-16	42.20	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZR15	8.0e-14	37.86	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM90	4.2e-07	34.78	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20...	[more]

BLAST of Chy6G123660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7L0	1.0e-104	87.11	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 ...	[more]
A0A5D3BAS8	2.1e-70	64.78	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LC65	4.7e-49	76.19	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 ...	[more]
A0A6J1CTE7	3.0e-32	46.95	putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 G...	[more]
A0A2P6P5L3	5.5e-26	43.88	Putative transcription factor B3-Domain family OS=Rosa chinensis OX=74649 GN=Rch...	[more]

BLAST of Chy6G123660 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56101.1	2.21e-134	87.11	hypothetical protein Csa_010492 [Cucumis sativus]	[more]
XP_031736688.1	1.44e-97	67.40	uncharacterized protein LOC116402065 [Cucumis sativus]	[more]
KAA0043114.1	2.59e-89	64.78	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 put...	[more]
KAG6589940.1	1.74e-54	45.33	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7023605.1	4.17e-46	58.14	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of Chy6G123660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03170.1	2.7e-17	42.20	AP2/B3-like transcriptional factor family protein	[more]
AT4G03160.1	5.7e-15	37.86	BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor f...	[more]
AT1G20600.1	3.0e-08	34.78	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 115..223 e-value: 5.0E-4 score: 29.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 116..223 score: 9.008688
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 113..210 e-value: 1.18792E-13 score: 62.7305
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 107..227 e-value: 2.0E-17 score: 64.8
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 113..210
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 12..221
None	No IPR available	PANTHER	PTHR31541:SF28	B3 DOMAIN PLANT PROTEIN	coord: 12..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G123660.1	Chy6G123660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding