Chy6G123190 (gene) Cucumber (hystrix) v1

Overview
NameChy6G123190
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPlant transposase
LocationchrH06: 21407966 .. 21408283 (+)
RNA-Seq ExpressionChy6G123190
SyntenyChy6G123190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTGGCGAGCAGGAAAATCACGATGGTGAAACAAATTCAATTAACTTCTAACAATGAAGAGCTCTGTAAAATGAAGCCATCCAATATACAATCTATGCAAGATTGGATGGACTTTGTGAAAGAAAAGAAGAGTGCAAGGTTCAAGGTAAGTCGATGTCATTTGTTTTAAAAGACACATATAAATACATTAATGCTTTTGATGATTAATACATTTGTGTTTGATTAGGCTGGAAGTGCAAAGTACAAATCAATGAAGAAGAGGCAACTTCCACATACATGTAGTCGTAAGGGTTATGCTCGATTGGAAGAATATATG

mRNA sequence

ATTGTGGCGAGCAGGAAAATCACGATGGTGAAACAAATTCAATTAACTTCTAACAATGAAGAGCTCTGTAAAATGAAGCCATCCAATATACAATCTATGCAAGATTGGATGGACTTTGTGAAAGAAAAGAAGAGTGCAAGGTTCAAGGCTGGAAGTGCAAAGTACAAATCAATGAAGAAGAGGCAACTTCCACATACATGTAGTCGTAAGGGTTATGCTCGATTGGAAGAATATATG

Coding sequence (CDS)

ATTGTGGCGAGCAGGAAAATCACGATGGTGAAACAAATTCAATTAACTTCTAACAATGAAGAGCTCTGTAAAATGAAGCCATCCAATATACAATCTATGCAAGATTGGATGGACTTTGTGAAAGAAAAGAAGAGTGCAAGGTTCAAGGCTGGAAGTGCAAAGTACAAATCAATGAAGAAGAGGCAACTTCCACATACATGTAGTCGTAAGGGTTATGCTCGATTGGAAGAATATATG

Protein sequence

IVASRKITMVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCSRKGYARLEEYM
Homology
BLAST of Chy6G123190 vs. ExPASy TrEMBL
Match: A0A5D3E4I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00020 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 61/69 (88.41%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 9  MVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCS 68
          MVKQIQ TSNNEEL KMKPSNIQS QDWMDFVKEKKS  FKA SAK+KSMKKRQLPHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDWMDFVKEKKSGWFKAESAKFKSMKKRQLPHTCS 60

Query: 69 RKGYARLEE 78
          RKGYARL E
Sbjct: 61 RKGYARLAE 69

BLAST of Chy6G123190 vs. ExPASy TrEMBL
Match: A0A5A7U615 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00240 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.7e-23
Identity = 62/74 (83.78%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 6  KITMVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPH 65
          K  MVK+IQ TSN EEL KMKPSNIQS QDWMDFVKEKK ARFKA SAK+KSMKKRQLPH
Sbjct: 9  KSRMVKKIQSTSNYEELSKMKPSNIQSTQDWMDFVKEKKIARFKAESAKFKSMKKRQLPH 68

Query: 66 TCSRKGYARLEEYM 80
          TCSRKGYARL E M
Sbjct: 69 TCSRKGYARLAEDM 82

BLAST of Chy6G123190 vs. ExPASy TrEMBL
Match: A0A5A7U5B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00120 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0

Query: 6   KITMVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPH 65
           K  MVKQIQ TSNN+EL KMK SNIQS QDWMDFVKEKKSARFKA SAK+KSMKKRQLPH
Sbjct: 147 KSRMVKQIQSTSNNKELSKMKSSNIQSTQDWMDFVKEKKSARFKAESAKFKSMKKRQLPH 206

Query: 66  TCSRKGYARLEE 78
           TCS KGYARL E
Sbjct: 207 TCSCKGYARLAE 218

BLAST of Chy6G123190 vs. ExPASy TrEMBL
Match: A0A5D3CF98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00080 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22
Identity = 60/71 (84.51%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 9  MVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCS 68
          MVKQIQ TSNNEEL KMK SNIQSMQDWMDF+KEKKSARFKA SAK+KSMKKRQ PHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 60

Query: 69 RKGYARLEEYM 80
           KGY RL E M
Sbjct: 61 CKGYVRLAEDM 71

BLAST of Chy6G123190 vs. ExPASy TrEMBL
Match: A0A5D3C765 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001660 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.3e-22
Identity = 60/71 (84.51%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 9  MVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCS 68
          MVK+IQ TSN EEL KMKPSNIQS Q WMDFVKEKK ARFKA SAK+KSMKKRQLPHTCS
Sbjct: 12 MVKKIQSTSNYEELSKMKPSNIQSTQYWMDFVKEKKIARFKAESAKFKSMKKRQLPHTCS 71

Query: 69 RKGYARLEEYM 80
          RKGYARL E M
Sbjct: 72 RKGYARLAEDM 82

BLAST of Chy6G123190 vs. NCBI nr
Match: TYK30814.1 (uncharacterized protein E5676_scaffold455G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (292), Expect = 2.57e-32
Identity = 61/69 (88.41%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 9  MVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCS 68
          MVKQIQ TSNNEEL KMKPSNIQS QDWMDFVKEKKS  FKA SAK+KSMKKRQLPHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDWMDFVKEKKSGWFKAESAKFKSMKKRQLPHTCS 60

Query: 69 RKGYARLEE 77
          RKGYARL E
Sbjct: 61 RKGYARLAE 69

BLAST of Chy6G123190 vs. NCBI nr
Match: KAA0055644.1 (uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK09898.1 uncharacterized protein E5676_scaffold16G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 8.51e-30
Identity = 60/71 (84.51%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 9  MVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCS 68
          MVKQIQ TSNNEEL KMK SNIQSMQDWMDF+KEKKSARFKA SAK+KSMKKRQ PHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 60

Query: 69 RKGYARLEEYM 79
           KGY RL E M
Sbjct: 61 CKGYVRLAEDM 71

BLAST of Chy6G123190 vs. NCBI nr
Match: KAA0051313.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 3.70e-29
Identity = 62/74 (83.78%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 6  KITMVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPH 65
          K  MVK+IQ TSN EEL KMKPSNIQS QDWMDFVKEKK ARFKA SAK+KSMKKRQLPH
Sbjct: 9  KSRMVKKIQSTSNYEELSKMKPSNIQSTQDWMDFVKEKKIARFKAESAKFKSMKKRQLPH 68

Query: 66 TCSRKGYARLEEYM 79
          TCSRKGYARL E M
Sbjct: 69 TCSRKGYARLAEDM 82

BLAST of Chy6G123190 vs. NCBI nr
Match: TYJ98641.1 (uncharacterized protein E5676_scaffold507G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 7.98e-29
Identity = 60/71 (84.51%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 9  MVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPHTCS 68
          MVKQIQ TSNNEEL KMKPSNIQS QD MDFV EKKS RFKA SAK+KSMKKR+LPHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDLMDFVNEKKSKRFKAESAKFKSMKKRKLPHTCS 60

Query: 69 RKGYARLEEYM 79
          RKGYARL E M
Sbjct: 61 RKGYARLAEDM 71

BLAST of Chy6G123190 vs. NCBI nr
Match: KAA0050424.1 (uncharacterized protein E6C27_scaffold175G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (285), Expect = 1.34e-28
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0

Query: 6   KITMVKQIQLTSNNEELCKMKPSNIQSMQDWMDFVKEKKSARFKAGSAKYKSMKKRQLPH 65
           K  MVKQIQ TSNN+EL KMK SNIQS QDWMDFVKEKKSARFKA SAK+KSMKKRQLPH
Sbjct: 147 KSRMVKQIQSTSNNKELSKMKSSNIQSTQDWMDFVKEKKSARFKAESAKFKSMKKRQLPH 206

Query: 66  TCSRKGYARLEE 77
           TCS KGYARL E
Sbjct: 207 TCSCKGYARLAE 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E4I43.4e-2388.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U6155.7e-2383.78Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G002... [more]
A0A5A7U5B01.7e-2284.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CF982.2e-2284.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C7658.3e-2284.51Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00... [more]
Match NameE-valueIdentityDescription
TYK30814.12.57e-3288.41uncharacterized protein E5676_scaffold455G00020 [Cucumis melo var. makuwa][more]
KAA0055644.18.51e-3084.51uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0051313.13.70e-2983.78Plant transposase [Cucumis melo var. makuwa][more]
TYJ98641.17.98e-2984.51uncharacterized protein E5676_scaffold507G00250 [Cucumis melo var. makuwa][more]
KAA0050424.11.34e-2884.72uncharacterized protein E6C27_scaffold175G00120 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33144OS10G0409366 PROTEIN-RELATEDcoord: 6..77
NoneNo IPR availablePANTHERPTHR33144:SF27SUBFAMILY NOT NAMEDcoord: 6..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G123190.1Chy6G123190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane