Chy6G122590 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G122590
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Wound-responsive family protein
Location	chrH06: 20169405 .. 20169921 (-)
RNA-Seq Expression	Chy6G122590
Synteny	Chy6G122590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAGGAGCGCAGTTTGCAGAGCGTGGTTCGTGGCGGCGAGCATCGGGGCAGTCGAGGCGTTGAAGGATCAAGGGGTTTGCCGGTGGAATAATGTGATTAAATCACTTCAACAACATGGGAAGACCAAAGTTAGGTCTTACTATCAAGCTAAGAAGCTCTCTGCTTCTTCTTCTTCCGCCATTGCCAACCAGATCAAGAAGTCTAGAGAGGATAAGATGAGGAAAGTTATGGATTTGAGCTGTTTGGGACCTAGTACTATTAGATTCTAGGACATGTTTTTGTTTATGCTTTTATATGAAGAGTGTTTTGGGTCTTGGTCATGTGGGGTAGAAGATATAATGTTCTTATCAAAAGAAAGAAAAAAAAAGTACTTCTAGTGAAATGATATATATATAGGTTGTTTCTTCTCTTGTTTTTGTTTCTGTTTGTGATGGTTTAGGGTTGAAGTTTGGTAATGAAGCTTCAATTCCCTTCACTCTTTTTTTGTAAATAGGTCTGGGGATTGCATATTAA

mRNA sequence

ATGTCTAGGAGCGCAGTTTGCAGAGCGTGGTTCGTGGCGGCGAGCATCGGGGCAGTCGAGGCGTTGAAGGATCAAGGGGTTTGCCGGTGGAATAATGTGATTAAATCACTTCAACAACATGGGAAGACCAAAGTTAGGTCTTACTATCAAGCTAAGAAGCTCTCTGCTTCTTCTTCTTCCGCCATTGCCAACCAGATCAAGAAGTCTAGAGAGGATAAGATGAGGAAAGTTATGGATTTGAGCTGTTTGGGACCTAGTCTGGGGATTGCATATTAA

Coding sequence (CDS)

ATGTCTAGGAGCGCAGTTTGCAGAGCGTGGTTCGTGGCGGCGAGCATCGGGGCAGTCGAGGCGTTGAAGGATCAAGGGGTTTGCCGGTGGAATAATGTGATTAAATCACTTCAACAACATGGGAAGACCAAAGTTAGGTCTTACTATCAAGCTAAGAAGCTCTCTGCTTCTTCTTCTTCCGCCATTGCCAACCAGATCAAGAAGTCTAGAGAGGATAAGATGAGGAAAGTTATGGATTTGAGCTGTTTGGGACCTAGTCTGGGGATTGCATATTAA

Protein sequence

MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAIANQIKKSREDKMRKVMDLSCLGPSLGIAY*

Homology

[Close]

BLAST of Chy6G122590 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 87
          AIANQIKKSREDKMRKVMDLSCLGPS
Sbjct: 61 AIANQIKKSREDKMRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. ExPASy TrEMBL
Match: A0A5A7TZR6 (Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00840 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 87
          AIA QI KSREDKMRKVMDLSCLGPS
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35
Identity = 77/86 (89.53%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK+RSYY AKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 87
          AI NQ+K+SRE+KMRKVMDLSCLGPS
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. ExPASy TrEMBL
Match: A0A6J1FVH7 (uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC111447671 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEA KDQGVCRWNNVIKSLQQHGKTK+RSYYQAKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 87
          AI NQ+K+ RE+KMRKVMDLSCLGPS
Sbjct: 61 AIGNQMKRCREEKMRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. ExPASy TrEMBL
Match: A0A6J1EMN4 (uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC111435977 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.2e-34
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSA CRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +K+RSYYQAKKLSASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 87
          AIANQI KSRE+KMRKVMDL CLGPS
Sbjct: 61 AIANQINKSREEKMRKVMDLGCLGPS 86

[Close]

BLAST of Chy6G122590 vs. NCBI nr
Match: KAE8650166.1 (hypothetical protein Csa_011372 [Cucumis sativus])

HSP 1 Score: 169 bits (428), Expect = 6.62e-52
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSL 87
          AIANQIKKSREDKMRKVMDLSCLGPSL
Sbjct: 61 AIANQIKKSREDKMRKVMDLSCLGPSL 87

[Close]

BLAST of Chy6G122590 vs. NCBI nr
Match: KAA0046885.1 (putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative wound-induced protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (411), Expect = 4.77e-50
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 86
          AIA QI KSREDKMRKVMDLSCLGPS
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida])

HSP 1 Score: 159 bits (403), Expect = 7.67e-48
Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1   MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
           MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK RSYYQAKKLSASSSS
Sbjct: 74  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKLSASSSS 133

Query: 61  AIANQIKKSREDKMRKVMDLSCLGPS 86
           AIANQI KSRE+KMRKVMDLSCLGPS
Sbjct: 134 AIANQINKSREEKMRKVMDLSCLGPS 159

[Close]

BLAST of Chy6G122590 vs. NCBI nr
Match: XP_023538267.1 (uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155 bits (392), Expect = 3.78e-47
Identity = 77/86 (89.53%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK RSYYQAKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 86
          AI NQ+K+SRE+K+RKVMDLSCLGPS
Sbjct: 61 AIGNQMKRSREEKVRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. NCBI nr
Match: XP_022993930.1 (uncharacterized protein LOC111489778 [Cucurbita maxima])

HSP 1 Score: 155 bits (392), Expect = 3.78e-47
Identity = 77/86 (89.53%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK+RSYY AKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 86
          AI NQ+K+SRE+KMRKVMDLSCLGPS
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPS 86

[Close]

BLAST of Chy6G122590 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-16
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 4  SAVCRAWFVAASIGAVEALKDQ-GVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAI 63
          S+  + W VAASIGAVEALKDQ GVCRWN VI+S  Q+ +  +RS  QAKKLS SSS   
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLS-SSSIDY 61

Query: 64 ANQIKKSREDKMRKVMDLSCLGPS 87
           N+ K++ E+ +R VM LSC GPS
Sbjct: 62 TNKTKQA-EESLRTVMYLSCWGPS 83

[Close]

BLAST of Chy6G122590 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 4  SAVCRAWFVAASIGAVEALKDQ-GVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAI 63
          S+  +AW VA SIGAVEALKDQ G+CRWN +++S+ QH +  VRS  Q K+ S+SS SA 
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 64 A-----NQIKKSREDKMRKVMDLSCLGPS 87
                ++  K  E+ +R VM LSC GP+
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of Chy6G122590 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 9  AWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAIANQIKK 68
          +W VA +I AVE LKDQGV RWN + + L +    +VR+     + S  +SS+ A  I+ 
Sbjct: 8  SWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRS 67

Query: 69 SR------EDKMRKVMDLSCLGPS 87
                  E    K M LSC GP+
Sbjct: 68 KPLSTTPFETSFEKAMGLSCFGPT 91

The following BLAST results are available for this feature:

BLAST of Chy6G122590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G122590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L594	6.7e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1	[more]
A0A5A7TZR6	2.1e-37	97.67	Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1JZW3	3.4e-35	89.53	uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778...	[more]
A0A6J1FVH7	1.3e-34	88.37	uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1EMN4	2.2e-34	88.37	uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]

BLAST of Chy6G122590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650166.1	6.62e-52	100.00	hypothetical protein Csa_011372 [Cucumis sativus]	[more]
KAA0046885.1	4.77e-50	97.67	putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative w...	[more]
XP_038877273.1	7.67e-48	94.19	uncharacterized protein LOC120069557 [Benincasa hispida]	[more]
XP_023538267.1	3.78e-47	89.53	uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo]	[more]
XP_022993930.1	3.78e-47	89.53	uncharacterized protein LOC111489778 [Cucurbita maxima]	[more]

BLAST of Chy6G122590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	4.6e-16	58.33	Wound-responsive family protein	[more]
AT4G10270.1	2.3e-15	49.44	Wound-responsive family protein	[more]
AT4G33560.1	1.2e-08	38.10	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 12..85 e-value: 4.8E-26 score: 91.6
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 4..86
None	No IPR available	PANTHER	PTHR33090:SF69	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 4..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G122590.1	Chy6G122590.1	mRNA